proj 2605, run 13, clone 429, gen 52

[dutchmm]

As with another 2605, this one has completed, and even after I ran qfix I cannot send in the results.
WTF?

[anandhanju]

FAHLog.txt please. Easy now, World Taekwondo Federation doesn't help

[dutchmm]

FAHlog.txt as requested:

Code: Select all

[01:11:22] - Preparing to get new work unit...
[01:11:22] + Attempting to get work packet
[01:11:22] - Connecting to assignment server
[01:11:23] - Successful: assigned to (171.64.65.56).
[01:11:23] + News From Folding@Home: Welcome to Folding@Home
[01:11:23] Loaded queue successfully.
[01:11:29] + Closed connections
[01:11:29] 
[01:11:29] + Processing work unit
[01:11:29] Core required: FahCore_a1.exe
[01:11:29] Core found.
[01:11:29] Working on Unit 03 [May 18 01:11:29]
[01:11:29] + Working ...
[01:11:30] 
[01:11:30] *------------------------------*
[01:11:30] Folding@Home Gromacs SMP Core
[01:11:30] Version 1.74 (November 27, 2006)
[01:11:30] 
[01:11:30] Preparing to commence simulation
[01:11:30] - Ensuring status. Please wait.
[01:11:30] - Starting from initial work packet
[01:11:30] 
[01:11:30] Project: 2605 (Run 13, Clone 429, Gen 52)
[01:11:30] 
[01:11:30] Assembly optimizations on if available.
[01:11:30] Entering M.D.
[01:11:47] percent)
[01:11:47] - Starting from initial work packet
[01:11:47] 
[01:11:47] Project: 2605 (Run 13, Clone 429, Gen 52)
[01:11:47] 
[01:11:47] Entering M.D.
[01:11:54] Protein: ProteExtra SSE boost OK.
[01:11:54] ocal files
[01:11:54] Extra SSE boost OK.
[01:23:36] es
[01:23:36] Completed 5000 out of 500000 steps  (1 percent)
[01:35:17] Writing local files
[01:35:17] Completed 10000 out of 500000 steps  (2 percent)
[01:46:55] Writing local files
[01:46:55] Completed 15000 out of 500000 steps  (3 percent)
[01:58:36] Writing local files
[01:58:36] Completed 20000 out of 500000 steps  (4 percent)
[02:10:40] Writing local files
[02:10:40] Completed 25000 out of 500000 steps  (5 percent)
[02:22:29] Writing local files
[02:22:29] Completed 30000 out of 500000 steps  (6 percent)
[02:34:10] Writing local files
[02:34:10] Completed 35000 out of 500000 steps  (7 percent)
[02:45:49] Writing local files
[02:45:50] Completed 40000 out of 500000 steps  (8 percent)
[02:57:30] Writing local files
[02:57:30] Completed 45000 out of 500000 steps  (9 percent)
[03:09:13] Writing local files
[03:09:13] Completed 50000 out of 500000 steps  (10 percent)
[03:20:57] Writing local files
[03:20:57] Completed 55000 out of 500000 steps  (11 percent)
[03:32:40] Writing local files
[03:32:40] Completed 60000 out of 500000 steps  (12 percent)
[03:44:22] Writing local files
[03:44:22] Completed 65000 out of 500000 steps  (13 percent)
[03:56:05] Writing local files
[03:56:05] Completed 70000 out of 500000 steps  (14 percent)
[04:07:46] Writing local files
[04:07:46] Completed 75000 out of 500000 steps  (15 percent)
[04:19:29] Writing local files
[04:19:29] Completed 80000 out of 500000 steps  (16 percent)
[04:31:10] Writing local files
[04:31:10] Completed 85000 out of 500000 steps  (17 percent)
[04:42:52] Writing local files
[04:42:52] Completed 90000 out of 500000 steps  (18 percent)
[04:54:34] Writing local files
[04:54:35] Completed 95000 out of 500000 steps  (19 percent)
[05:06:18] Writing local files
[05:06:18] Completed 100000 out of 500000 steps  (20 percent)
[05:17:58] Writing local files
[05:17:58] Completed 105000 out of 500000 steps  (21 percent)
[05:29:39] Writing local files
[05:29:39] Completed 110000 out of 500000 steps  (22 percent)
[05:41:20] Writing local files
[05:41:20] Completed 115000 out of 500000 steps  (23 percent)
[05:53:00] Writing local files
[05:53:00] Completed 120000 out of 500000 steps  (24 percent)
[06:04:42] Writing local files
[06:04:42] Completed 125000 out of 500000 steps  (25 percent)
[06:16:47] Writing local files
[06:16:47] Completed 130000 out of 500000 steps  (26 percent)
[06:28:39] Writing local files
[06:28:40] Completed 135000 out of 500000 steps  (27 percent)
[06:40:20] Writing local files
[06:40:20] Completed 140000 out of 500000 steps  (28 percent)
[06:51:59] Writing local files
[06:51:59] Completed 145000 out of 500000 steps  (29 percent)
[07:03:39] Writing local files
[07:03:39] Completed 150000 out of 500000 steps  (30 percent)
[07:15:19] Writing local files
[07:15:19] Completed 155000 out of 500000 steps  (31 percent)
[07:27:00] Writing local files
[07:27:00] Completed 160000 out of 500000 steps  (32 percent)
[07:38:40] Writing local files
[07:38:40] Completed 165000 out of 500000 steps  (33 percent)
[07:50:20] Writing local files
[07:50:20] Completed 170000 out of 500000 steps  (34 percent)
[08:02:01] Writing local files
[08:02:01] Completed 175000 out of 500000 steps  (35 percent)
[08:13:40] Writing local files
[08:13:40] Completed 180000 out of 500000 steps  (36 percent)
[08:25:20] Writing local files
[08:25:20] Completed 185000 out of 500000 steps  (37 percent)
[08:37:00] Writing local files
[08:37:00] Completed 190000 out of 500000 steps  (38 percent)
[08:48:40] Writing local files
[08:48:40] Completed 195000 out of 500000 steps  (39 percent)
[09:00:23] Writing local files
[09:00:23] Completed 200000 out of 500000 steps  (40 percent)
[09:12:03] Writing local files
[09:12:03] Completed 205000 out of 500000 steps  (41 percent)
[09:23:42] Writing local files
[09:23:42] Completed 210000 out of 500000 steps  (42 percent)
[09:35:22] Writing local files
[09:35:23] Completed 215000 out of 500000 steps  (43 percent)
[09:47:03] Writing local files
[09:47:03] Completed 220000 out of 500000 steps  (44 percent)
[09:58:42] Writing local files
[09:58:43] Completed 225000 out of 500000 steps  (45 percent)
[10:10:23] Writing local files
[10:10:23] Completed 230000 out of 500000 steps  (46 percent)
[10:22:04] Writing local files
[10:22:04] Completed 235000 out of 500000 steps  (47 percent)
[10:33:44] Writing local files
[10:33:44] Completed 240000 out of 500000 steps  (48 percent)
[10:45:23] Writing local files
[10:45:24] Completed 245000 out of 500000 steps  (49 percent)
[10:57:05] Writing local files
[10:57:06] Completed 250000 out of 500000 steps  (50 percent)
[11:08:44] Writing local files
[11:08:44] Completed 255000 out of 500000 steps  (51 percent)
[11:20:24] Writing local files
[11:20:24] Completed 260000 out of 500000 steps  (52 percent)
[11:32:04] Writing local files
[11:32:04] Completed 265000 out of 500000 steps  (53 percent)
[11:43:50] Writing local files
[11:43:50] Completed 270000 out of 500000 steps  (54 percent)
[11:57:12] Writing local files
[11:57:12] Completed 275000 out of 500000 steps  (55 percent)
[12:09:45] Writing local files
[12:09:46] Completed 280000 out of 500000 steps  (56 percent)
[12:21:51] Writing local files
[12:21:51] Completed 285000 out of 500000 steps  (57 percent)
[12:33:34] Writing local files
[12:33:34] Completed 290000 out of 500000 steps  (58 percent)
[12:45:14] Writing local files
[12:45:14] Completed 295000 out of 500000 steps  (59 percent)
[12:56:55] Writing local files
[12:56:55] Completed 300000 out of 500000 steps  (60 percent)
[13:08:37] Writing local files
[13:08:38] Completed 305000 out of 500000 steps  (61 percent)
[13:20:21] Writing local files
[13:20:21] Completed 310000 out of 500000 steps  (62 percent)
[13:32:04] Writing local files
[13:32:04] Completed 315000 out of 500000 steps  (63 percent)
[13:43:48] Writing local files
[13:43:48] Completed 320000 out of 500000 steps  (64 percent)
[13:55:32] Writing local files
[13:55:32] Completed 325000 out of 500000 steps  (65 percent)
[14:07:14] Writing local files
[14:07:14] Completed 330000 out of 500000 steps  (66 percent)
[14:18:56] Writing local files
[14:18:57] Completed 335000 out of 500000 steps  (67 percent)
[14:30:40] Writing local files
[14:30:40] Completed 340000 out of 500000 steps  (68 percent)
[14:42:23] Writing local files
[14:42:23] Completed 345000 out of 500000 steps  (69 percent)
[14:54:11] Writing local files
[14:54:11] Completed 350000 out of 500000 steps  (70 percent)
[15:06:26] Writing local files
[15:06:26] Completed 355000 out of 500000 steps  (71 percent)
[15:18:40] Writing local files
[15:18:40] Completed 360000 out of 500000 steps  (72 percent)
[15:30:45] Writing local files
[15:30:45] Completed 365000 out of 500000 steps  (73 percent)
[15:42:35] Writing local files
[15:42:35] Completed 370000 out of 500000 steps  (74 percent)
[15:54:25] Writing local files
[15:54:25] Completed 375000 out of 500000 steps  (75 percent)
[16:06:15] Writing local files
[16:06:15] Completed 380000 out of 500000 steps  (76 percent)
[16:18:03] Writing local files
[16:18:03] Completed 385000 out of 500000 steps  (77 percent)
[16:29:59] Writing local files
[16:29:59] Completed 390000 out of 500000 steps  (78 percent)
[16:41:39] Writing local files
[16:41:39] Completed 395000 out of 500000 steps  (79 percent)
[16:53:18] Writing local files
[16:53:18] Completed 400000 out of 500000 steps  (80 percent)
[17:04:58] Writing local files
[17:04:58] Completed 405000 out of 500000 steps  (81 percent)
[17:16:39] Writing local files
[17:16:39] Completed 410000 out of 500000 steps  (82 percent)
[17:28:20] Writing local files
[17:28:21] Completed 415000 out of 500000 steps  (83 percent)
[17:40:17] Writing local files
[17:40:17] Completed 420000 out of 500000 steps  (84 percent)
[17:51:58] Writing local files
[17:51:58] Completed 425000 out of 500000 steps  (85 percent)
[18:03:40] Writing local files
[18:03:40] Completed 430000 out of 500000 steps  (86 percent)
[18:15:20] Writing local files
[18:15:20] Completed 435000 out of 500000 steps  (87 percent)
[18:27:01] Writing local files
[18:27:01] Completed 440000 out of 500000 steps  (88 percent)
[18:38:41] Writing local files
[18:38:41] Completed 445000 out of 500000 steps  (89 percent)
[18:50:21] Writing local files
[18:50:21] Completed 450000 out of 500000 steps  (90 percent)
[19:02:01] Writing local files
[19:02:01] Completed 455000 out of 500000 steps  (91 percent)
[19:13:42] Writing local files
[19:13:42] Completed 460000 out of 500000 steps  (92 percent)
[19:25:23] Writing local files
[19:25:23] Completed 465000 out of 500000 steps  (93 percent)
[19:37:04] Writing local files
[19:37:04] Completed 470000 out of 500000 steps  (94 percent)
[19:48:44] Writing local files
[19:48:44] Completed 475000 out of 500000 steps  (95 percent)
[20:00:25] Writing local files
[20:00:25] Completed 480000 out of 500000 steps  (96 percent)
[20:12:15] Writing local files
[20:12:15] Completed 485000 out of 500000 steps  (97 percent)
[20:24:00] Writing local files
[20:24:00] Completed 490000 out of 500000 steps  (98 percent)
[20:35:41] Writing local files
[20:35:41] Completed 495000 out of 500000 steps  (99 percent)
[20:47:22] Writing local files
[20:47:22] Completed 500000 out of 500000 steps  (100 percent)
[20:47:22] Writing final coordinates.
[20:47:22] Past main M.D. loop
[20:47:22] Will end MPI now
[20:48:22] 
[20:48:22] Finished Work Unit:
[20:48:22] - Reading up to 3721056 from "work/wudata_03.arc": Read 3721056
[20:48:22] - Reading up to 1777224 from "work/wudata_03.xtc": Read 1777224
[20:48:22] goefile size: 0
[20:48:22] logfile size: 16912
[20:48:22] Leaving Run
[20:48:26] - Writing 5519592 bytes of core data to disk...
[20:48:26]   ... Done.
[20:48:27] - Shutting down core
[20:48:27] 
[20:48:27] Folding@home Core Shutdown: FINISHED_UNIT

Folding@Home Client Shutdown.


--- Opening Log file [May 18 21:03:50] 


# Linux Console Edition #######################################################
###############################################################################

                       Folding@Home Client Version 6.02beta

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: /home/mike/Download
Executable: ./fah6
Arguments: -send 3 

[21:03:50] - Ask before connecting: No
[21:03:50] - User name: Dutchmm (Team 31574)
[21:03:50] - User ID: 2C9583CC4EA765F8
[21:03:50] - Machine ID: 1
[21:03:50] 
[21:03:50] Loaded queue successfully.
[21:03:50] Attempting to return result(s) to server...
[21:03:50] - Failed to send unit 03 to server

Folding@Home Client Shutdown.


--- Opening Log file [May 18 21:05:34] 


# SMP Client ##################################################################
###############################################################################

                       Folding@Home Client Version 6.02beta

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: /home/mike/Download
Executable: ./fah6
Arguments: -smp 

[21:05:34] - Ask before connecting: No
[21:05:34] - User name: Dutchmm (Team 31574)
[21:05:34] - User ID: 2C9583CC4EA765F8
[21:05:34] - Machine ID: 1
[21:05:34] 
[21:05:34] Loaded queue successfully.
[21:05:34] 
[21:05:34] + Processing work unit
[21:05:34] Core required: FahCore_a1.exe
[21:05:34] Core found.
[21:05:34] Working on Unit 03 [May 18 21:05:34]
[21:05:34] + Working ...
[21:05:34] 
[21:05:34] *------------------------------*
[21:05:34] Folding@Home Gromacs SMP Core
[21:05:34] Version 1.74 (November 27, 2006)
[21:05:34] 
[21:05:34] Preparing to commence simulation
[21:05:34] - Ensuring status. Please wait.
[21:05:34] - Shutting down core
[21:05:51] k pa- Sta
[21:05:51] Project: 0 (Run 0, Clone 0, Gen 0)
[21:05:51] 
[21:05:51] Error: Could not write local file.  Exiting.
[21:05:51] ot write local file.  Exiting.
[21:05:51] - Shutting down core

Folding@Home Client Shutdown.

and here is the output from qfix:

Code: Select all

mike@mwireless Download]$ ./qfix --help
entry 4, status 0, address 0.0.0.0
entry 5, status 0, address 0.0.0.0
entry 6, status 0, address 0.0.0.0
entry 7, status 0, address 0.0.0.0
entry 8, status 0, address 0.0.0.0
entry 9, status 0, address 0.0.0.0
entry 0, status 0, address 0.0.0.0
entry 1, status 0, address 171.64.65.56:8080
entry 2, status 0, address 171.64.65.56:8080
entry 3, status 1, address 171.64.65.56:8080
  Found results <work/wuresults_03.dat>: proj 2605, run 13, clone 429, gen 52
   -- queue entry: proj 2605, run 13, clone 429, gen 52
   -- queue entry isn't empty
File is OK

as I ran it between the -send invocation of fah6 and the attempt to restart
Want to get this off and start folding again
Mike

[rbrandman]

Thanks for your post. The researcher in charge of this project is looking into it.

Relly

[uncle_fungus]

Do you have a wuresults_03.dat file in your work folder?

If so, run:

Code: Select all

./fah6 -delete 03
./qfix
./fah6 -send 03

[rbrandman]

We've looked into the problem on our end, and as you suggest we don't see a record of that particular work unit being uploaded into our system. Unfortunately it looks as if the files may have been corrupted (suggested by "P0,R0,C0,G0" in the later logs), and it's difficult to diagnose the reason from the one log file. We will keep an eye on this particular project to see if other people are having similar issues.

Relly

[ChelseaOilman]

It looks like you may have done something with the WU before the client finished writing the files, or your sneakernetting method is flawed.

[dutchmm]

t looks like you may have done something with the WU before the client finished writing the files, or your sneakernetting method is flawed.

Nope, the machine finished the unit and reported it had written the results. It then sat there idling for some hours before I noticed. Luckily, Relly's answer did the biz, so I have been able to submit the results,, and and restart folding. How about a helpbot on this site to guide us to the correct remedial action quicker? Both the project and I lost ~24 hours folding waiting for the right spell.

[sortofageek]

Just a confirmation it has been credited.


Hi Dutchmm (team 31574),
Your WU (P2605 R13 C429 G52) was added to the stats database on 2008-05-19 16:36:06 for 1760 points of credit.