Search found 102 matches

by jjmiller
Wed Nov 13, 2024 2:11 pm
Forum: Issues with a specific WU
Topic: Corrupted / bad job 18237/1069/0/71 (failing for all users)
Replies: 21
Views: 1346

Re: Corrupted / bad job 18237/1069/0/71 (failing for all users)

Hi Nicolas- Hmm, I wouldn't expect the reset in error counts to affect the record of who all has tried a WU. We see this in the above WU reports where a given WU has been issued 10+ times (the default max is 5 attempts). How soon after a failure are you checking? It could be that it takes a little w...
by jjmiller
Wed Nov 13, 2024 2:07 pm
Forum: Issues with a specific WU
Topic: Corrupted / bad job 18237/1069/0/71 (failing for all users)
Replies: 21
Views: 1346

Re: Corrupted / bad job 18237/1069/0/71 (failing for all users)

Hi Andre_Ti- Glad the errors have slowed down- I'm hopeful we will have core patches available soon. Regarding a progress bar, I'm not sure- it should be feasible! Perhaps the reason this hasn't been implemented yet is that projects are occasionally adjusted on-the-fly and either taken down before 1...
by jjmiller
Tue Nov 12, 2024 8:19 pm
Forum: Issues with a specific WU
Topic: Corrupted / bad job 18237/1069/0/71 (failing for all users)
Replies: 21
Views: 1346

Re: Corrupted / bad job 18237/1069/0/71 (failing for all users)

Hi Andre_Ti, I do actually care quite a bit about the project, hence the restarts in the error counts to try and get more data. As I mentioned above, we don't currently have a good way to selectively filter which RUN x CLONEs get their errors reset- I can either not reset the error counts and get no...
by jjmiller
Thu Nov 07, 2024 8:46 pm
Forum: Issues with a specific server
Topic: Feedback on Highland Servers?
Replies: 6
Views: 1326

Re: Feedback on Highland Servers?

Hi speed2048- are these errors persisting?
by jjmiller
Thu Nov 07, 2024 8:22 pm
Forum: Issues with a specific WU
Topic: Corrupted / bad job 18237/1069/0/71 (failing for all users)
Replies: 21
Views: 1346

Re: Corrupted / bad job 18237/1069/0/71 (failing for all users)

Hi all, Thanks for the reports. We're in a bit of a pickle with core 0x24 projects at the moment. As folks have suggested above, after 5 failed attempts a WU will no longer be sent out. Currently on 0x24 projects we're seeing many WUs failing because there's what seems to be a mismatch between how t...
by jjmiller
Fri Nov 01, 2024 8:26 pm
Forum: Issues with a specific server
Topic: Feedback on Highland Servers?
Replies: 6
Views: 1326

Feedback on Highland Servers?

Hi all, We've been doing some network testing on some of the highland servers at UPenn in response to several reports of slow connectivity. We made some changes to all the work servers 158.130.118.2[3-6] around a week ago. From what we can tell, this has improved transfer speeds and reduced packet l...
by jjmiller
Sat Oct 19, 2024 12:23 am
Forum: Announcements - Folding Consortium
Topic: [CPU] project 18240 on FAH!
Replies: 0
Views: 3921

[CPU] project 18240 on FAH!

[CPU] p18240 – Simulations of T4 lysozyme in various force fields for force field accuracy evaluation (cont). 18240 - amber99sb disp with aadisp water - https://stats.foldingathome.org/project?p=18240 <project type="A8" id="18240"> <stats-credit v="2733"/> <deadline v=&...
by jjmiller
Thu Sep 26, 2024 10:34 am
Forum: Announcements - Folding Consortium
Topic: [GPU] project 18238 now on FAH
Replies: 0
Views: 4087

[GPU] project 18238 now on FAH

[GPU] p18238 – Simulations of T4 lysozyme in various force fields for force field accuracy evaluation (cont). 18238 - charmm36m with tip3p water - https://stats.foldingathome.org/project?p=18238 <project type="OPENMM_24" id="18238"> <stats-credit v="190000"/> <deadline ...
by jjmiller
Sun Sep 22, 2024 11:38 am
Forum: Announcements - Folding Consortium
Topic: [GPU] project 1823[5-7] now on FAH
Replies: 0
Views: 4246

[GPU] project 1823[5-7] now on FAH

[GPU] p18235-18237 – Simulations of T4 lysozyme in various force fields for force field accuracy evaluation. 18235 - amber03 with tip3p water - https://stats.foldingathome.org/project?p=18235 <project type="OPENMM_24" id="18235"> <stats-credit v="42250"/> <deadline v=&q...
by jjmiller
Mon Sep 16, 2024 3:06 pm
Forum: Announcements - Folding Consortium
Topic: [GPU] project 18230 now on FAH
Replies: 0
Views: 4232

[GPU] project 18230 now on FAH

[GPU] p18230 – Simulations of phosphoglycerate kinase in force field amber19sb- https://stats.foldingathome.org/project?p=18230

Code: Select all

<project type="OPENMM_24" id="18230">
<stats-credit v="143000"/>
<deadline v="5"/>
by jjmiller
Tue Aug 27, 2024 1:55 pm
Forum: Announcements - Folding Consortium
Topic: [GPU] project 18251 now on FAH
Replies: 0
Views: 5154

[GPU] project 18251 now on FAH

[GPU] p18251 – Simulations of the tau proline rich region in amber99sb-disp force field with tip4pd water https://stats.foldingathome.org/project?p=18251

Code: Select all

<project type="OPENMM_24" id="18251">
<stats-credit v="118000"/>
<deadline v="5"/>
by jjmiller
Thu Aug 01, 2024 10:14 am
Forum: Announcements - Folding Consortium
Topic: [GPU] project 18228 now on FAH
Replies: 0
Views: 7276

[GPU] project 18228 now on FAH

[GPU] p18228 – Simulations of phosphoglycerate kinase in force field amber14sb- https://stats.foldingathome.org/project?p=18228

Code: Select all

<project type="OPENMM_23" id="18228">
<stats-credit v="100500"/>
<deadline v="5"/>
by jjmiller
Mon Jul 29, 2024 5:28 pm
Forum: Announcements - Folding Consortium
Topic: [GPU] project 18215 in full FAH!
Replies: 3
Views: 43882

Re: [GPU] project 18215 in full FAH!

Apologies for the crypticness of the above message- in our excitement to send out more WUs we neglected to add many details. In one trajectory of our previously sampled dataset, we saw ApoE exhibit a partial unfolding transition from a fully packed structure to a partially unpacked structure. Our ex...
by jjmiller
Fri Jul 26, 2024 6:59 pm
Forum: Announcements - Folding Consortium
Topic: [GPU] project 18215 in full FAH!
Replies: 3
Views: 43882

Re: [GPU] project 18215 in full FAH!

Wanted to let folks know that in some of our followup data analysis we noticed that one of our simulations led to a really interesting state which we'd not seen before. We have lots of hypotheses about what this state is and wanted to collect a bit more data on this state. I've released another ~800...