Project: 2442 (Run 6, Clone 2, Gen 0)

[Leoslocks]

Project: 2442 (Run 6, Clone 2, Gen 0) there is no information on this project on the Summary page. It has been working the past 4 days with 5 days to go.

Code: Select all

# Windows CPU Console Edition #################################################
###############################################################################

                       Folding@Home Client Version 6.20

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: c:\F@H\Core1
Service: c:\F@H\Core1\6.20.exe
Arguments: -svcstart -d c:\F@H\Core1 

Launched as a service.
Entered c:\F@H\Core1 to do work.

[15:00:34] - Ask before connecting: No
[15:00:34] - User name: Leoslocks (Team 34878)
[15:00:34] - User ID: 1E6E8159239C24FA
[15:00:34] - Machine ID: 1
[15:00:34] 
[15:00:35] Loaded queue successfully.
[15:00:35] 
[15:00:35] + Processing work unit
[15:00:35] Core required: FahCore_78.exe
[15:00:35] Core found.
[15:00:35] Working on queue slot 05 [November 1 15:00:35 UTC]
[15:00:35] + Working ...
[15:00:35] 
[15:00:35] *------------------------------*
[15:00:35] Folding@Home Gromacs Core
[15:00:35] Version 1.90 (March 8, 2006)
[15:00:35] 
[15:00:35] Preparing to commence simulation
[15:00:35] - Ensuring status. Please wait.
[15:00:52] - Looking at optimizations...
[15:00:52] - Working with standard loops on this execution.
[15:00:52] - Previous termination of core was improper.
[15:00:52] - Files status OK
[15:01:00] - Expanded 5269503 -> 29536841 (decompressed 560.5 percent)
[15:01:00] - Checksums don't match (work/wudata_05.xtc)
[15:01:00] - Starting from initial work packet
[15:01:00] 
[15:01:00] Project: 2442 (Run 6, Clone 2, Gen 0)
[15:01:00] 
[15:01:01] Entering M.D.
[15:01:08] Protein: Protein
[15:01:08] 
[15:01:08] Writing local files
[15:01:16] Writing local files
[15:01:17] Completed 0 out of 250000 steps  (0%)
[16:34:42] Writing local files
[16:34:42] Completed 2500 out of 250000 steps  (1%)
[18:08:11] Writing local files
[18:08:11] Completed 5000 out of 250000 steps  (2%)
[19:41:44] Writing local files
[19:41:44] Completed 7500 out of 250000 steps  (3%)
[21:15:17] Writing local files
[21:15:17] Completed 10000 out of 250000 steps  (4%)
[22:48:52] Writing local files
[22:48:52] Completed 12500 out of 250000 steps  (5%)
[00:22:28] Writing local files
[00:22:28] Completed 15000 out of 250000 steps  (6%)
[01:56:05] Writing local files
[01:56:05] Completed 17500 out of 250000 steps  (7%)
[03:29:42] Writing local files
[03:29:42] Completed 20000 out of 250000 steps  (8%)
[05:03:19] Writing local files
[05:03:19] Completed 22500 out of 250000 steps  (9%)
[06:36:58] Writing local files
[06:36:58] Completed 25000 out of 250000 steps  (10%)
[08:10:36] Writing local files
[08:10:37] Completed 27500 out of 250000 steps  (11%)
[09:44:15] Writing local files
[09:44:15] Completed 30000 out of 250000 steps  (12%)
[11:17:53] Writing local files
[11:17:53] Completed 32500 out of 250000 steps  (13%)
[12:51:32] Writing local files
[12:51:32] Completed 35000 out of 250000 steps  (14%)
[14:25:12] Writing local files
[14:25:12] Completed 37500 out of 250000 steps  (15%)
[15:58:51] Writing local files
[15:58:51] Completed 40000 out of 250000 steps  (16%)
[17:32:29] Writing local files
[17:32:30] Completed 42500 out of 250000 steps  (17%)
[19:13:13] Writing local files
[19:13:13] Completed 45000 out of 250000 steps  (18%)
[21:11:01] Writing local files
[21:11:02] Completed 47500 out of 250000 steps  (19%)
[23:06:14] Writing local files
[23:06:14] Completed 50000 out of 250000 steps  (20%)
[01:22:02] Writing local files
[01:22:03] Completed 52500 out of 250000 steps  (21%)
[03:16:06] Writing local files
[03:16:07] Completed 55000 out of 250000 steps  (22%)
[05:19:55] Writing local files
[05:19:56] Completed 57500 out of 250000 steps  (23%)
[07:17:25] Writing local files
[07:17:25] Completed 60000 out of 250000 steps  (24%)
[09:12:25] Writing local files
[09:12:25] Completed 62500 out of 250000 steps  (25%)
[11:53:59] Writing local files
[11:54:00] Completed 65000 out of 250000 steps  (26%)
[13:56:19] Writing local files
[13:56:19] Completed 67500 out of 250000 steps  (27%)
[15:52:13] Writing local files
[15:52:13] Completed 70000 out of 250000 steps  (28%)
[18:05:43] Writing local files
[18:05:43] Completed 72500 out of 250000 steps  (29%)
[20:15:03] Writing local files
[20:15:04] Completed 75000 out of 250000 steps  (30%)
[22:47:52] Writing local files
[22:47:52] Completed 77500 out of 250000 steps  (31%)
[00:57:14] Writing local files
[00:57:14] Completed 80000 out of 250000 steps  (32%)
[02:52:43] Writing local files
[02:52:43] Completed 82500 out of 250000 steps  (33%)
[05:14:23] Writing local files
[05:14:23] Completed 85000 out of 250000 steps  (34%)
[07:21:59] Writing local files
[07:21:59] Completed 87500 out of 250000 steps  (35%)
[09:36:47] Writing local files
[09:36:47] Completed 90000 out of 250000 steps  (36%)
[11:38:04] Writing local files
[11:38:04] Completed 92500 out of 250000 steps  (37%)

[John_Weatherman]

From your log :-
"Working with standard loops on this execution. - Previous termination of core was improper."
Seems like you need to reboot as there's no SSE use, unless there's some odd thing going on.

[Leoslocks]

It is funny how the simple things are often overlooked. I have been working through some issues with two 4870s on this machine.

Seems like you need to reboot as there's no SSE use, unless there's some odd thing going on.

Spot on. A reboot got SSE back and unit times down to 45 minutes.

[Thorsten_Q.]

And does anybody know how many point we wil get for thr 2442 WUs? As already mentioned, there is no information for this WUs on the project summay list. I'm folding 2 of these WU at the moment. Thanks!

[ppetrone]

Hi, my name is Paula and I am responsible for project 2442.
Thank you for your post and your request of information regarding this project is absolutely fair.
Project 2442 is currently in beta-testing and worth 905 points.
Detailed information regarding this project was posted on the forum but only comes out in Psummary when the project is in advance methods or Folding@home.
viewtopic.php?f=22&t=6701

Unfortunately it seems that during Halloween night (I am not kidding) about 100 of these Work Units "scaped" from the beta-testing realm into advanced or folding@home methods. I very much apologize for this inconvenience. I hope people that got these Work Units would be willing to finish them all the way through, since the information that they will provide is very valuable to the project. However, I understand that they might not be willing to. The worse scenario is that the WU will EUE (finish abruptly) but seems unlikely. Please feel free to cancel the WU if you decide you prefer to go for a WU that has already been tested.
Please, post here if you have any questions and thanks again,
Paula

[The_Celt]

Hi Paula, I have been folding one of the "scaped" WU's since Oct 31. I do intend to let it finish (FahMon says it will finish Nov 20) (Yes, Extra SSE boost is OK). Are there any deadlines for these WU's?
Thanks.

[ppetrone]

Hi Celt, Thank you for your help. I tested them internally and they take less time. Please could you let me know how it goes? The deadlines are pretty long (30 days) and you are fine. The info you give me is very valuable.
Thanks and happy weekend!

Paula

[The_Celt]

Paula, thanks for the answer. This client is running an a 1 GHz P3 computer. I know it ain't very exciting or glamorous, but points are points.

[ppetrone]

Of course, points are points. And the science that comes out of you is definitely exciting. What I am trying to find out with your project is how proteins are translated inside the ribosome exit tunnel. The ribosome is a tiny factory inside the cell in charge of manufacturing proteins. These proteins come out through a long assembly line, the tunnel. Some proteins, though, get stuck inside the tunnel, because the have a certain "stalling" sequence. In your project 2442 and the whole 2440s series we are simulating such a mechanism, and trying to find out why/how stalling happens. Cheers and keep me posted about completion of 2442. Thank you once again with your contribution.
Paula