Errored out after starting. @ 0%
Water molecule starting @ atom 46051 can not be settled.
Water molecule starting @ atom 129988 can not be settled.
Water molecule starting @ atom 63232 can not be settled.
INTERRUPTED
BW
Project: 2677 (Run 9, Clone 26, Gen 25)
Moderators: Site Moderators, FAHC Science Team
-
- Posts: 244
- Joined: Thu Dec 06, 2007 6:31 pm
- Hardware configuration: Folding with: 4x RTX 4070Ti, 1x RTX 4080 Super
- Location: United Kingdom
- Contact:
Re: Project: 2677 (Run 9, Clone 26, Gen 25)
Had exactly the same problem .... (verbosity not on though)
Code: Select all
[06:14:05] *------------------------------*
[06:14:05] Folding@Home Gromacs SMP Core
[06:14:05] Version 2.10 (Sun Aug 30 03:43:28 CEST 2009)
[06:14:05]
[06:14:05] Preparing to commence simulation
[06:14:05] - Ensuring status. Please wait.
[06:14:06] Called DecompressByteArray: compressed_data_size=4843591 data_size=24023789, decompressed_data_size=24023789 diff=0
[06:14:06] - Digital signature verified
[06:14:06]
[06:14:06] Project: 2677 (Run 9, Clone 26, Gen 25)
[06:14:06]
[06:14:06] Assembly optimizations on if available.
[06:14:06] Entering M.D.
[06:14:16] on if available.
[06:14:16] Entering M.D.
[06:14:27] (0%)
[06:14:28]
[06:14:28] Folding@home Core Shutdown: INTERRUPTED
[06:14:32] CoreStatus = 66 (102)
[06:14:32] + Shutdown requested by user. Exiting.
Folding@Home Client Shutdown.
Folding Stats (HFM.NET): DocJonz Folding Farm Stats
-
- Posts: 8
- Joined: Mon Jun 23, 2008 2:11 pm
Re: Project: 2677 (Run 9, Clone 26, Gen 25)
Ditto on the problem here, same WU p2677 R9/C26/G25
Code: Select all
# Linux SMP Console Edition ###################################################
###############################################################################
Folding@Home Client Version 6.24beta
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: /home/tyler/folding
Executable: ./fah6
Arguments: -smp -advmethods -verbosity 9
[14:51:14] - Ask before connecting: No
[14:51:14] - User name: skinnykid63 (Team 11108)
[14:51:14] - User ID: 4E84BFBC013312A2
[14:51:14] - Machine ID: 1
[14:51:14]
[14:51:14] Work directory not found. Creating...
[14:51:14] Could not open work queue, generating new queue...
[14:51:14] - Autosending finished units... [September 30 14:51:14 UTC]
[14:51:14] Trying to send all finished work units
[14:51:14] + No unsent completed units remaining.
[14:51:14] - Autosend completed
[14:51:14] - Preparing to get new work unit...
[14:51:14] + Attempting to get work packet
[14:51:14] - Will indicate memory of 988 MB
[14:51:14] - Connecting to assignment server
[14:51:14] Connecting to http://assign.stanford.edu:8080/
[14:51:14] Posted data.
[14:51:14] Initial: 40AB; - Successful: assigned to (171.64.65.56).
[14:51:14] + News From Folding@Home: Welcome to Folding@Home
[14:51:14] Loaded queue successfully.
[14:51:14] Connecting to http://171.64.65.56:8080/
[14:51:21] Posted data.
[14:51:21] Initial: 0000; - Receiving payload (expected size: 4844103)
[14:51:27] - Downloaded at ~788 kB/s
[14:51:27] - Averaged speed for that direction ~788 kB/s
[14:51:27] + Received work.
[14:51:27] + Closed connections
[14:51:27]
[14:51:27] + Processing work unit
[14:51:27] At least 4 processors must be requested.Core required: FahCore_a2.exe
[14:51:27] Core found.
[14:51:27] Working on queue slot 01 [September 30 14:51:27 UTC]
[14:51:27] + Working ...
[14:51:27] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a2.exe -dir work/ -suffix 01 -checkpoint 7 -verbose -lifeline 3749 -version 624'
[14:51:27]
[14:51:27] *------------------------------*
[14:51:27] Folding@Home Gromacs SMP Core
[14:51:27] Version 2.10 (Sun Aug 30 03:43:28 CEST 2009)
[14:51:27]
[14:51:27] Preparing to commence simulation
[14:51:27] - Ensuring status. Please wait.
[14:51:28] Called DecompressByteArray: compressed_data_size=4843591 data_size=24023789, decompressed_data_size=24023789 diff=0
[14:51:28] - Digital signature verified
[14:51:28]
[14:51:28] Project: 2677 (Run 9, Clone 26, Gen 25)
[14:51:28]
[14:51:28] Assembly optimizations on if available.
[14:51:28] Entering M.D.
[14:51:38] (Run 9, Clone 26, Gen 25)
[14:51:38]
[14:51:38] Entering M.D.
NNODES=4, MYRANK=0, HOSTNAME=tyler-desktop
NNODES=4, MYRANK=2, HOSTNAME=tyler-desktop
NODEID=0 argc=20
NNODES=4, MYRANK=1, HOSTNAME=tyler-desktop
NODEID=1 argc=20
NNODES=4, MYRANK=3, HOSTNAME=tyler-desktop
NODEID=2 argc=20
Reading file work/wudata_01.tpr, VERSION 3.3.99_development_20070618 (single precision)
NODEID=3 argc=20
Note: tpx file_version 48, software version 68
NOTE: The tpr file used for this simulation is in an old format, for less memory usage and possibly more performance create a new tpr file with an up to date version of grompp
Making 1D domain decomposition 1 x 1 x 4
starting mdrun 'IBX in water'
6500000 steps, 13000.0 ps (continuing from step 6250000, 12500.0 ps).
t = 12500.001 ps: Water molecule starting at atom 46051 can not be settled.
Check for bad contacts and/or reduce the timestep.
Step 6250001, time 12500 (ps) LINCS WARNING
relative constraint deviation after LINCS:
rms 0.023458, max 1.592038 (between atoms 1119 and 1121)
bonds that rotated more than 90 degrees:
atom 1 atom 2 angle previous, current, constraint length
t = 12500.003 ps: Water molecule starting at atom 129988 can not be settled.
Check for bad contacts and/or reduce the timestep.
t = 12500.003 ps: Water molecule starting at atom 63232 can not be settled.
Check for bad contacts and/or reduce the timestep.
[14:51:53] lding@home Core Shutdown: INTERRUPTED
application called MPI_Abort(MPI_COMM_WORLD, 102) - process 0
[0]0:Return code = 102
[0]1:Return code = 0, signaled with Segmentation fault
[0]2:Return code = 0, signaled with Segmentation fault
[0]3:Return code = 0, signaled with Quit
[14:51:57] CoreStatus = 66 (102)
[14:51:57] + Shutdown requested by user. Exiting.***** Got a SIGTERM signal (15)
[14:51:57] Killing all core threads
Folding@Home Client Shutdown.
-
- Posts: 93
- Joined: Mon Jan 21, 2008 6:42 pm
Re: Project: 2677 (Run 9, Clone 26, Gen 25)
Come On........
I'm getting REALLY tired of Dumping out my Work Folder and Queue.DAT file trying to make this GO AWAY. Please FIX it or PULL it - I don't care which.
Gary
I'm getting REALLY tired of Dumping out my Work Folder and Queue.DAT file trying to make this GO AWAY. Please FIX it or PULL it - I don't care which.
Gary
Re: Project: 2677 (Run 9, Clone 26, Gen 25)
Gary - If you can, find the queue position of the bad wu. It will be xx, where xx is 00 through 09. Then stop the client, and then run it with the -delete xx flag. The client will purge the bad WU and stop. Then when you start it up again, it should download a different work unit.
I've PM'd the researcher about this work unit. 5 reports is enough to know it's faulty.
Thanks, everyone, for reporting the problem.
I've PM'd the researcher about this work unit. 5 reports is enough to know it's faulty.
Thanks, everyone, for reporting the problem.
Re: Project: 2677 (Run 9, Clone 26, Gen 25)
Same WU, same issue at 0%.
Re: Project: 2677 (Run 9, Clone 26, Gen 25)
How do I get rid of this unit? I deleted queue.dat & the work folder but it continues to redownload the exact same broken unit...
Re: Project: 2677 (Run 9, Clone 26, Gen 25)
The server will download the same WU several times before it will assign a new WU.
You have two choices. Repeatedly delete the WU until you get a new one, or change your MachineID to an unused value.
You have two choices. Repeatedly delete the WU until you get a new one, or change your MachineID to an unused value.
Posting FAH's log:
How to provide enough info to get helpful support.
How to provide enough info to get helpful support.