Project: 2665 (Run 0, Clone 479, Gen 20)

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mikeb12
Posts: 28
Joined: Tue Feb 12, 2008 11:51 am
Location: South Carolina USA

Project: 2665 (Run 0, Clone 479, Gen 20)

Post by mikeb12 »

just reporting, already on a new wu...

6.22 mpich Vista 64
Client-core communications error: ERROR 0x7b

Code: Select all

[02:52:25] Completed 247500 out of 250000 steps  (99 percent)
[03:09:40] Writing local files
[03:09:40] Completed 250000 out of 250000 steps  (100 percent)
[03:09:40] Writing final coordinates.
[03:09:41] Past main M.D. loop
[03:09:42] Will end MPI now
[03:10:42] 
[03:10:42] Finished Work Unit:
[03:10:42] - Reading up to 21310704 from "work/wudata_00.arc": Read 21310704
[03:10:42] - Reading up to 558976 from "work/wudata_00.xtc": Read 558976
[03:10:42] goefile size: 0
[03:10:42] logfile size: 341580
[03:10:42] Leaving Run
[03:10:43] - Writing 22217632 bytes of core data to disk...
[03:10:43]   ... Done.
[03:10:43] - Failed to delete work/wudata_00.sas
[03:10:43] - Failed to delete work/wudata_00.goe
[03:10:43] Warning:  check for stray files
[03:10:43] - Shutting down core
[03:10:43] 
[03:10:43] Folding@home Core Shutdown: FINISHED_UNIT
[03:10:43] 
[03:10:43] Folding@home Core Shutdown: FINISHED_UNIT
[03:12:49] CoreStatus = 64 (100)
[03:12:49] Sending work to server
[03:12:49] Project: 2665 (Run 0, Clone 403, Gen 41)


[03:12:49] + Attempting to send results [August 13 03:12:49 UTC]
[03:26:51] + Results successfully sent
[03:26:51] Thank you for your contribution to Folding@Home.
[03:26:51] + Number of Units Completed: 10

[03:26:51] Using generic mpiexec calls
[03:28:54] - Preparing to get new work unit...
[03:28:54] + Attempting to get work packet
[03:28:54] - Connecting to assignment server
[03:28:55] - Successful: assigned to (171.64.65.64).
[03:28:55] + News From Folding@Home: Welcome to Folding@Home
[03:28:55] Loaded queue successfully.
[03:29:27] + Closed connections
[03:29:27] 
[03:29:27] + Processing work unit
[03:29:27] Work type a1 not eligible for variable processors
[03:29:27] Core required: FahCore_a1.exe
[03:29:27] Core found.
[03:29:27] Using generic mpiexec calls
[03:29:27] Working on queue slot 01 [August 13 03:29:27 UTC]
[03:29:27] + Working ...
[03:29:27] 
[03:29:27] *------------------------------*
[03:29:27] Folding@Home Gromacs SMP Core
[03:29:27] Version 1.74 (March 10, 2007)
[03:29:27] 
[03:29:27] Preparing to commence simulation
[03:29:27] - Ensuring status. Please wait.
[03:29:33] - Starting from initial work packet
[03:29:33] 
[03:29:33] Project: 2665 (Run 0, Clone 479, Gen 20)
[03:29:33] 
[03:29:33] Assembly optimizations on if available.
[03:29:33] Entering M.D.
[03:29:53]  percent)
[03:29:53] - Starting from initial work packet
[03:29:53] 
[03:29:53] Project: 2665 (Run 0, Clone 479, Gen 20)
[03:29:53] 
[03:29:56] Entering M.D.
[03:30:04] Rejecting checkpoint
[03:30:05] Protein: HGG in water
[03:30:05] Writing local files
[03:30:13] Extra SSE boost OK.
[03:30:13] what have done.
[03:30:13] logfile size: 9422
[03:30:13] - Writing 9958 bytes of core data to disk...
[03:30:13]   ... Done.
[03:30:13] - Failed to delete work/wudata_01.arc
[03:30:13] No C.P. to delete.
[03:30:13] - Failed to delete work/wudata_01.bed
[03:30:13] - Failed to delete work/wudata_01.sas
[03:30:13] - Failed to delete work/wudata_- Failed to delete work/wudata_01.sas
[03:30:13] - Failed to delete work/wudata_01.goe
[03:30:13] Warning:  check for stray files
[03:30:14] 
[03:30:14] Folding@home Core Shutdown: EARLY_UNIT_END
[03:30:14] Finalizing output
[03:32:16] CoreStatus = 7B (123)
[03:32:16] Client-core communications error: ERROR 0x7b
[03:32:16] This is a sign of more serious problems, shutting down.
Nitrodist
Posts: 1
Joined: Fri Aug 08, 2008 7:53 am

Project: 2665 (Run 0, Clone 479, Gen 20)

Post by Nitrodist »

Code: Select all

[15:09:38] Writing local files
[15:09:38] Completed 500000 out of 500000 steps  (100 percent)
[15:09:38] Writing final coordinates.
[15:09:38] Past main M.D. loop



	M E G A - F L O P S   A C C O U N T I N G

	Parallel run - timing based on wallclock.
   RF=Reaction-Field  FE=Free Energy  SCFE=Soft-Core/Free Energy
   T=Tabulated        W3=SPC/TIP3p    W4=TIP4p (single or pairs)
   NF=No Forces

 Computing:                        M-Number         M-Flops  % of Flops
-----------------------------------------------------------------------
 VdW(T)                      1368204.894965 73883064.328110    16.6
 RF Coul                      547101.468017 18054348.444561     4.1
 RF Coul [W3]                   2369.684097   232229.041506     0.1
 RF Coul + VdW(T)             617184.147334 40116969.576710     9.0
 RF Coul + VdW(T) [W3]        286045.280053 37185886.406890     8.4
 RF Coul + VdW(T) [W3-W3]     767997.175775 245759096.248000    55.3
 Outer nonbonded loop         239835.824247  2398358.242470     0.5
 1,4 nonbonded interactions     1059.002118    95310.190620     0.0
 NS-Pairs                     502289.797695 10548085.751595     2.4
 Reset In Box                   3883.727673    34953.549057     0.0
 Shift-X                       77590.155180   465540.931080     0.1
 CG-CoM                         1770.635412    51348.426948     0.0
 Sum Forces                   116509.733019   116509.733019     0.0
 Bonds                         13324.526649   572954.645907     0.1
 Angles                        15680.031360  2555845.111680     0.6
 Propers                        5407.510815  1238319.976635     0.3
 Impropers                      1012.002024   210496.420992     0.0
 RB-Dihedrals                  14193.528387  3505801.511589     0.8
 Virial                        38890.577781   700030.400058     0.2
 Update                        38836.577673  1203933.907863     0.3
 Stop-CM                       38836.500000   388365.000000     0.1
 P-Coupling                    38836.577673   233019.466038     0.1
 Calc-Ekin                     38836.655346  1048589.694342     0.2
 Constraint-V                  38836.577673   233019.466038     0.1
 Constraint-Vir                25212.050424   605089.210176     0.1
 Settle                         8404.016808  2714497.428984     0.6
-----------------------------------------------------------------------
 Total                                      444151663.110868   100.0
-----------------------------------------------------------------------

               NODE (s)   Real (s)      (%)
       Time: 112993.000 112993.000    100.0
                       1d07h23:13
               (Mnbf/s)   (GFlops)   (ns/day)  (hour/ns)
Performance:     31.762      3.931      0.765     31.387
[15:09:39] Will end MPI now
[15:10:39] 
[15:10:39] Finished Work Unit:
[15:10:39] - Reading up to 3728544 from "work/wudata_01.arc": Read 3728544
[15:10:39] - Reading up to 1784984 from "work/wudata_01.xtc": Read 1784984
[15:10:39] goefile size: 0
[15:10:39] logfile size: 16972
[15:10:39] Leaving Run
[15:10:44] - Writing 5534900 bytes of core data to disk...
[15:10:44]   ... Done.
[15:10:45] - Shutting down core
[15:10:45] 
[15:10:45] Folding@home Core Shutdown: FINISHED_UNIT
[0]0:Return code = 100
[0]1:Return code = 0, signaled with Quit
[0]2:Return code = 0, signaled with Quit
[0]3:Return code = 0, signaled with Quit
[15:10:52] CoreStatus = 64 (100)
[15:10:52] Unit 1 finished with 67 percent of time to deadline remaining.
[15:10:52] Updated performance fraction: 0.651460
[15:10:52] Sending work to server


[15:10:52] + Attempting to send results
[15:10:52] - Reading file work/wuresults_01.dat from core
[15:10:52]   (Read 5534900 bytes from disk)
[15:10:52] Connecting to http://171.64.65.56:8080/
[15:12:37] Posted data.
[15:12:37] Initial: 0000; - Uploaded at ~51 kB/s
[15:12:38] - Averaged speed for that direction ~46 kB/s
[15:12:38] + Results successfully sent
[15:12:38] Thank you for your contribution to Folding@Home.
[15:12:38] + Number of Units Completed: 10

[0]0:Return code = 18
[0]1:Return code = 0, signaled with Quit
[0]2:Return code = 0, signaled with Quit
[0]3:Return code = 0, signaled with Quit
[15:16:43] - Warning: Could not delete all work unit files (1): Core returned invalid code
[15:16:43] Trying to send all finished work units
[15:16:43] + No unsent completed units remaining.
[15:16:43] - Preparing to get new work unit...
[15:16:43] + Attempting to get work packet
[15:16:43] - Will indicate memory of 499 MB
[15:16:43] - Connecting to assignment server
[15:16:43] Connecting to http://assign.stanford.edu:8080/
[15:16:43] Posted data.
[15:16:43] Initial: 40AB; - Successful: assigned to (171.64.65.64).
[15:16:43] + News From Folding@Home: Welcome to Folding@Home
[15:16:43] Loaded queue successfully.
[15:16:43] Connecting to http://171.64.65.64:8080/
[15:16:48] Posted data.
[15:16:48] Initial: 0000; - Receiving payload (expected size: 4735567)
[15:17:04] - Downloaded at ~289 kB/s
[15:17:04] - Averaged speed for that direction ~323 kB/s
[15:17:04] + Received work.
[15:17:04] Trying to send all finished work units
[15:17:04] + No unsent completed units remaining.
[15:17:04] + Closed connections
[15:17:04] 
[15:17:04] + Processing work unit
[15:17:04] Core required: FahCore_a1.exe
[15:17:04] Core found.
[15:17:04] Working on Unit 02 [August 14 15:17:04]
[15:17:04] + Working ...
[15:17:04] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a1.exe -dir work/ -suffix 02 -checkpoint 15 -forceasm -verbose -lifeline 5474 -version 602'

[15:17:04] 
[15:17:04] *------------------------------*
[15:17:04] Folding@Home Gromacs SMP Core
[15:17:04] Version 1.74 (November 27, 2006)
[15:17:04] 
[15:17:04] Preparing to commence simulation
[15:17:04] - Ensuring status. Please wait.
[15:17:21] - Assembly optimizations manually forced on.
[15:17:21] - Not checking prior termination.
[15:17:25] - Expanded 4735055 -> 24426905 (decompressed 515.8 percent)
[15:17:26] - Starting from initial work packet
[15:17:26] 
[15:17:26] Project: 2665 (Run 0, Clone 479, Gen 20)
[15:17:26] 
[15:17:27] Assembly optimizations on if available.
[15:17:27] Entering M.D.
NNODES=4, MYRANK=3, HOSTNAME=nitrodist1-desktop
NNODES=4, MYRANK=1, HOSTNAME=nitrodist1-desktop
NNODES=4, MYRANK=0, HOSTNAME=nitrodist1-desktop
NNODES=4, MYRANK=2, HOSTNAME=nitrodist1-desktop
NODEID=3 argc=15
NODEID=0 argc=15
NODEID=1 argc=15
NODEID=2 argc=15
      Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
       Copyright (c) 1991-2000, University of Groningen, The Netherlands.
             Copyright (c) 2001-2004, The GROMACS development team,
            check out http://www.gromacs.org for more information.

        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[15:17:33] Rejecting checkpoint
[15:17:37] 
[15:17:37] Writing local files
[15:17:39] 
[15:17:39] Writing local files
starting mdrun 'HGG in water'
250000 steps,    500.0 ps.

[15:17:44] Extra SSE boost OK.
[15:17:45] Writing local files
[15:17:47] Completed 0 out of 250000 steps  (0 percent)
[15:17:48] 
[15:17:48] Folding@home Core Shutdown: INTERRUPTED
[0]0:Return code = 102
[0]1:Return code = 0, signaled with Segmentation fault
[0]2:Return code = 0, signaled with Segmentation fault
[0]3:Return code = 0, signaled with Segmentation fault
[15:17:52] CoreStatus = 66 (102)
[15:17:52] + Shutdown requested by user. Exiting.***** Got a SIGTERM signal (15)
[15:17:52] Killing all core threads

Folding@Home Client Shutdown.
nitrodist1@nitrodist1-desktop:~$ ./startfah

Note: Please read the license agreement (fah6 -license). Further 
use of this software requires that you have read and accepted this agreement.

2 cores detected


--- Opening Log file [August 14 19:09:04] 


# SMP Client ##################################################################
###############################################################################

                       Folding@Home Client Version 6.02

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: /home/nitrodist1/folding/FAH
Executable: ./fah6
Arguments: -forceasm -smp -verbosity 9 

Warning:
 By using the -forceasm flag, you are overriding
 safeguards in the program. If you did not intend to
 do this, please restart the program without -forceasm.
 If work units are not completing fully (and particularly
 if your machine is overclocked), then please discontinue
 use of the flag.

[19:09:04] - Ask before connecting: No
[19:09:04] - User name: Mark` (Team 2630)
[19:09:04] - User ID: 5E2698AA4E184A22
[19:09:04] - Machine ID: 1
[19:09:04] 
[19:09:04] Loaded queue successfully.
[19:09:04] - Autosending finished units...
[19:09:04] Trying to send all finished work units
[19:09:04] + No unsent completed units remaining.
[19:09:04] - Autosend completed
[19:09:04] 
[19:09:04] + Processing work unit
[19:09:04] Core required: FahCore_a1.exe
[19:09:04] Core found.
[19:09:04] Working on Unit 02 [August 14 19:09:04]
[19:09:04] + Working ...
[19:09:04] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a1.exe -dir work/ -suffix 02 -checkpoint 15 -forceasm -verbose -lifeline 6478 -version 602'

[19:09:04] 
[19:09:04] *------------------------------*
[19:09:04] Folding@Home Gromacs SMP Core
[19:09:04] Version 1.74 (November 27, 2006)
[19:09:04] 
[19:09:04] Preparing to commence simulation
[19:09:04] - Ensuring status. Please wait.
[19:09:07] 
[19:09:08] Project: 2665 (Run 0, Clone 479, Gen 20)
[19:09:08] 
[19:09:09] Assembly optimizations on if available.
[19:09:09] Entering M.D.
[19:09:26]  on if available.
[19:09:26] Entering M.D.
NNODES=4, MYRANK=0, HOSTNAME=nitrodist1-desktop
NNODES=4, MYRANK=1, HOSTNAME=nitrodist1-desktop
NNODES=4, MYRANK=3, HOSTNAME=nitrodist1-desktop
NNODES=4, MYRANK=2, HOSTNAME=nitrodist1-desktop
NODEID=1 argc=15
NODEID=3 argc=15
NODEID=0 argc=15
NODEID=2 argc=15
      Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
       Copyright (c) 1991-2000, University of Groningen, The Netherlands.
             Copyright (c) 2001-2004, The GROMACS development team,
            check out http://www.gromacs.org for more information.

        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[19:09:33] Calling FAH init
(single precision)
[19:09:35] Read topology
[19:09:35] (Starting from checkpoint)
[19:09:36] Read checkpoint
starting mdrun 'HGG in water'
250000 steps,    500.0 ps.

[19:09:37] Protein: HGG in water
[19:09:37] Writing local files
[19:09:43] Extra SSE boost OK.
[19:09:45] Writing local files
[19:09:45] Completed 0 out of 250000 steps  (0 percent)
[19:09:46] 
[19:09:46] Folding@home Core Shutdown: INTERRUPTED
[0]0:Return code = 102
[0]1:Return code = 0, signaled with Segmentation fault
[0]2:Return code = 0, signaled with Segmentation fault
[0]3:Return code = 0, signaled with Segmentation fault
[19:09:50] CoreStatus = 66 (102)
[19:09:50] + Shutdown requested by user. Exiting.***** Got a SIGTERM signal (15)
[19:09:50] Killing all core threads

Folding@Home Client Shutdown.
nitrodist1@nitrodist1-desktop:~$ ./startfah

Note: Please read the license agreement (fah6 -license). Further 
use of this software requires that you have read and accepted this agreement.

2 cores detected


--- Opening Log file [August 14 19:12:46] 


# SMP Client ##################################################################
###############################################################################

                       Folding@Home Client Version 6.02

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: /home/nitrodist1/folding/FAH
Executable: ./fah6
Arguments: -forceasm -smp -verbosity 9 

Warning:
 By using the -forceasm flag, you are overriding
 safeguards in the program. If you did not intend to
 do this, please restart the program without -forceasm.
 If work units are not completing fully (and particularly
 if your machine is overclocked), then please discontinue
 use of the flag.

[19:12:46] - Ask before connecting: No
[19:12:46] - User name: Mark` (Team 2630)
[19:12:46] - User ID: 5E2698AA4E184A22
[19:12:46] - Machine ID: 1
[19:12:46] 
[19:12:46] Loaded queue successfully.
[19:12:46] - Autosending finished units...
[19:12:46] Trying to send all finished work units
[19:12:46] + No unsent completed units remaining.
[19:12:46] - Autosend completed
[19:12:46] 
[19:12:46] + Processing work unit
[19:12:46] Core required: FahCore_a1.exe
[19:12:46] Core found.
[19:12:46] Working on Unit 02 [August 14 19:12:46]
[19:12:46] + Working ...
[19:12:46] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a1.exe -dir work/ -suffix 02 -checkpoint 15 -forceasm -verbose -lifeline 6497 -version 602'

[19:12:46] 
[19:12:46] *------------------------------*
[19:12:46] Folding@Home Gromacs SMP Core
[19:12:46] Version 1.74 (November 27, 2006)
[19:12:46] 
[19:12:46] Preparing to commence simulation
[19:12:46] - Ensuring status. Please wait.
[19:12:48] 
[19:12:49] Project: 2665 (Run 0, Clone 479, Gen 20)
[19:12:49] 
[19:12:49] Assembly optimizations on if available.
[19:12:49] Entering M.D.
[19:13:06]  on if available.
[19:13:06] Entering M.D.
NNODES=4, MYRANK=2, HOSTNAME=nitrodist1-desktop
NNODES=4, MYRANK=0, HOSTNAME=nitrodist1-desktop
NNODES=4, MYRANK=1, HOSTNAME=nitrodist1-desktop
NNODES=4, MYRANK=3, HOSTNAME=nitrodist1-desktop
NODEID=1 argc=15
NODEID=2 argc=15
NODEID=3 argc=15
NODEID=0 argc=15
      Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
       Copyright (c) 1991-2000, University of Groningen, The Netherlands.
             Copyright (c) 2001-2004, The GROMACS development team,
            check out http://www.gromacs.org for more information.

        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

(single precision)
[19:13:14] Starting from checkpoint)
[19:13:15] ing local files
starting mdrun 'HGG in water'
250000 steps,    500.0 ps.

[19:13:16] Protein: HGG in water
[19:13:16] Writing local files
[19:13:20] Extra SSE boost OK.
[19:13:21] Writing local files
[19:13:21] Completed 0 out of 250000 steps  (0 percent)
[19:13:22] 
[19:13:22] Folding@home Core Shutdown: INTERRUPTED
[0]0:Return code = 102
[0]1:Return code = 0, signaled with Segmentation fault
[0]2:Return code = 0, signaled with Segmentation fault
[0]3:Return code = 0, signaled with Segmentation fault
[19:13:26] CoreStatus = 66 (102)
[19:13:26] + Shutdown requested by user. Exiting.***** Got a SIGTERM signal (15)
[19:13:26] Killing all core threads

Folding@Home Client Shutdown.
nitrodist1@nitrodist1-desktop:~$ 

Going to delete the data and start afresh.

edit: Also, this is under a Q9300 at stock (2.5ghz) and under a guest Ubuntu 64-bit installation in vmware and the host OS is XP Pro 64bit. Memory is at DDR2 800mhz stock and in a 2x2GB configuration.
mikeb12
Posts: 28
Joined: Tue Feb 12, 2008 11:51 am
Location: South Carolina USA

Re: Project: 2665 (Run 0, Clone 479, Gen 20)

Post by mikeb12 »

I picked up this wu last night and it failed right from the get go...

Vista 64 6.22 mpich

Code: Select all

[08:52:04] Completed 250000 out of 250000 steps  (100 percent)
[08:52:04] Writing final coordinates.
[08:52:05] Past main M.D. loop
[08:52:05] Will end MPI now
[08:53:05] 
[08:53:05] Finished Work Unit:
[08:53:05] - Reading up to 21310704 from "work/wudata_04.arc": Read 21310704
[08:53:05] - Reading up to 556980 from "work/wudata_04.xtc": Read 556980
[08:53:05] goefile size: 0
[08:53:05] logfile size: 203292
[08:53:05] Leaving Run
[08:53:07] - Writing 22077348 bytes of core data to disk...
[08:53:07]   ... Done.
[08:53:08] - Failed to delete work/wudata_04.sas
[08:53:08] - Failed to delete work/wudata_04.goe
[08:53:08] Warning:  check for stray files
[08:53:08] - Shutting down core
[08:55:08] 
[08:55:08] Folding@home Core Shutdown: FINISHED_UNIT
[08:55:08] 
[08:55:08] Folding@home Core Shutdown: FINISHED_UNIT
[08:55:14] CoreStatus = 64 (100)
[08:55:14] Sending work to server
[08:55:14] Project: 2665 (Run 3, Clone 504, Gen 41)


[08:55:14] + Attempting to send results [August 16 08:55:14 UTC]
[09:04:52] + Results successfully sent
[09:04:52] Thank you for your contribution to Folding@Home.
[09:04:52] + Number of Units Completed: 12

[09:04:53] Using generic mpiexec calls
[09:06:57] - Preparing to get new work unit...
[09:06:57] + Attempting to get work packet
[09:06:57] - Connecting to assignment server
[09:06:57] - Successful: assigned to (171.64.65.64).
[09:06:57] + News From Folding@Home: Welcome to Folding@Home
[09:06:58] Loaded queue successfully.
[09:07:12] + Closed connections
[09:07:12] 
[09:07:12] + Processing work unit
[09:07:12] Work type a1 not eligible for variable processors
[09:07:12] Core required: FahCore_a1.exe
[09:07:12] Core found.
[09:07:12] Using generic mpiexec calls
[09:07:12] Working on queue slot 05 [August 16 09:07:12 UTC]
[09:07:12] + Working ...
[09:07:12] 
[09:07:12] *------------------------------*
[09:07:12] Folding@Home Gromacs SMP Core
[09:07:12] Version 1.74 (March 10, 2007)
[09:07:12] 
[09:07:12] Preparing to commence simulation
[09:07:13] - Ensuring status. Please wait.
[09:07:17] - Starting from initial work packet
[09:07:17] 
[09:07:17] Project: 2665 (Run 0, Clone 479, Gen 20)
[09:07:17] 
[09:07:17] Assembly optimizations on if available.
[09:07:17] Entering M.D.
[09:07:37]  percent)
[09:07:37] - Starting from initial work packet
[09:07:37] 
[09:07:37] Project: 2665 (Run 0, Clone 479, Gen 20)
[09:07:37] 
[09:07:39] Entering M.D.
[09:07:46] Rejecting checkpoint
[09:07:48] Protein: HGG in water
[09:07:48] Writing local files
[09:07:55] Extra SSE boost OK.
[09:07:55] ue further.
[09:07:55] Going to send back what have done.
[09:07:55] logfile size: 9422Gromacs cannot continue further.
[09:07:55] Going to send back what have done.
[09:07:55] logfile size: 9422
[09:07:55] - Writing 9958 bytes of core data to disk...
[09:07:55]   ... Done.
[09:07:55] o delete work/wudata_05.bed
[09:07:55] - Failed to delete work/wudata_05.sas
[09:07:55] -
[09:07:55] Folding@home Core Shutdown: EARLY_UNIT_END
[09:07:55] Finalizing output
[09:07:55]  files
[09:09:55] 
[09:09:55] Folding@home Core Shutdown: EARLY_UNIT_END
[09:09:55] Finalizing output
[09:09:58] CoreStatus = 7B (123)
[09:09:58] Client-core communications error: ERROR 0x7b
[09:09:58] Deleting current work unit & continuing...
[09:09:58] Using generic mpiexec calls
[09:12:02] - Preparing to get new work unit...
[09:12:02] + Attempting to get work packet
[09:12:02] - Connecting to assignment server
[09:12:03] - Successful: assigned to (171.64.65.64).
[09:12:03] + News From Folding@Home: Welcome to Folding@Home
[09:12:03] Loaded queue successfully.
[09:12:17] + Closed connections
[09:12:22] 
[09:12:22] + Processing work unit
[09:12:22] Work type a1 not eligible for variable processors
[09:12:22] Core required: FahCore_a1.exe
[09:12:22] Core found.
[09:12:22] Using generic mpiexec calls
[09:12:22] Working on queue slot 06 [August 16 09:12:22 UTC]
[09:12:22] + Working ...
[09:12:22] 
[09:12:22] *------------------------------*
[09:12:22] Folding@Home Gromacs SMP Core
[09:12:22] Version 1.74 (March 10, 2007)
[09:12:22] 
[09:12:22] Preparing to commence simulation
[09:12:22] - Ensuring status. Please wait.
[09:12:27] - Starting from initial work packet
[09:12:27] 
[09:12:27] Project: 2665 (Run 0, Clone 479, Gen 20)
[09:12:27] 
[09:12:27] Assembly optimizations on if available.
[09:12:27] Entering M.D.
[09:12:47]  percent)
[09:12:47] - Starting from initial work packet
[09:12:47] 
[09:12:47] Project: 2665 (Run 0, Clone 479, Gen 20)
[09:12:47] 
[09:12:49] Entering M.D.
[09:12:55] Rejecting checkpoint
[09:12:56] Protein: HGG in water
[09:12:56] Writing local files
[09:13:03] Extra SSE boost OK.
[09:13:03] Writing local files
[09:13:03] - Failed to delete work/wudata_06.arc
[09:13:03] - FaileGromacs cannot continue further.
[09:13:03] Going to send back what have done.
[09:13:03] logfile size: 9422
[09:13:03] - Writing 9958 bytes of core data to disk...
[09:13:03]   ... Done.
[09:13:03] 
[09:13:03] Warning:  check for stray files
[09:13:03] o delete.
[09:13:03] - Failed to delete work/wudata_06.bed
[09:13:03] - Failed to delete work/wudata_06.sas
[09:13:03] - Failed to delete work/wudata_06.goe
[09:13:03] Warning:  check for stray files
[09:15:03] 
[09:15:03] Folding@home Core Shutdown: EARLY_UNIT_END
[09:15:03] Finalizing output
[09:15:06] CoreStatus = 7B (123)
[09:15:06] Client-core communications error: ERROR 0x7b
[09:15:06] Deleting current work unit & continuing...
[09:15:06] Using generic mpiexec calls
[09:17:10] - Preparing to get new work unit...
[09:17:10] + Attempting to get work packet
[09:17:10] - Connecting to assignment server
[09:17:11] - Successful: assigned to (171.64.65.64).
[09:17:11] + News From Folding@Home: Welcome to Folding@Home
[09:17:11] Loaded queue successfully.
[09:17:25] + Closed connections
[09:17:30] 
[09:17:30] + Processing work unit
[09:17:30] Work type a1 not eligible for variable processors
[09:17:30] Core required: FahCore_a1.exe
[09:17:30] Core found.
[09:17:30] Using generic mpiexec calls
[09:17:30] Working on queue slot 07 [August 16 09:17:30 UTC]
[09:17:30] + Working ...
[09:17:30] 
[09:17:30] *------------------------------*
[09:17:30] Folding@Home Gromacs SMP Core
[09:17:30] Version 1.74 (March 10, 2007)
[09:17:30] 
[09:17:30] Preparing to commence simulation
[09:17:30] - Ensuring status. Please wait.
[09:17:35] - Starting from initial work packet
[09:17:35] 
[09:17:35] Project: 2665 (Run 0, Clone 479, Gen 20)
[09:17:35] 
[09:17:35] Assembly optimizations on if available.
[09:17:35] Entering M.D.
[09:17:55]  percent)
[09:17:55] - Starting from initial work packet
[09:17:55] 
[09:17:55] Project: 2665 (Run 0, Clone 479, Gen 20)
[09:17:55] 
[09:17:57] Entering M.D.
[09:18:03] Rejecting checkpoint
[09:18:05] Protein: HGG in water
[09:18:05] Writing local files
[09:18:11] Extra SSE boost OK.
[09:18:11] what have done.
[09:18:11] logfile size: 9422
[09:18:11] - Writing 99logfile size: 9422Gromacs cannot continue further.
[09:18:11] Going to send back what have done.
[09:18:11] logfile size: 9422
[09:18:11] - Writing 9958 bytes of core data to disk...
[09:18:11]   ... Done.
[09:18:11] o delete work/wudata_07.bed
[09:18:11] - Failed to delete work/wudata_07.sas
[09:18:11] - Failed to delete work/wudata_07.goe
[09:18:11] Warning:  check for stray files
[09:18:11] RLY_UNIT_END
[09:18:11] Finalizing output
[09:20:11] RLY_UNIT_END
[09:20:11] Finalizing output
[09:20:14] CoreStatus = 7B (123)
[09:20:14] Client-core communications error: ERROR 0x7b
[09:20:14] - Attempting to download new core...
[09:20:14] + Downloading new core: FahCore_a1.exe
[09:20:19] + 10240 bytes downloaded
[09:20:19] + 20480 bytes downloaded
[09:20:19] + 30720 bytes downloaded
[09:20:19] + 40960 bytes downloaded
[09:20:19] + 51200 bytes downloaded
[09:20:19] + 61440 bytes downloaded
[09:20:19] + 71680 bytes downloaded
[09:20:19] + 81920 bytes downloaded
[09:20:19] + 92160 bytes downloaded
[09:20:19] + 102400 bytes downloaded
[09:20:19] + 112640 bytes downloaded
[09:20:19] + 122880 bytes downloaded
[09:20:19] + 133120 bytes downloaded
[09:20:19] + 143360 bytes downloaded
[09:20:19] + 153600 bytes downloaded
[09:20:19] + 163840 bytes downloaded
[09:20:19] + 174080 bytes downloaded
[09:20:19] + 184320 bytes downloaded
[09:20:19] + 194560 bytes downloaded
[09:20:19] + 204800 bytes downloaded
[09:20:19] + 215040 bytes downloaded
[09:20:19] + 225280 bytes downloaded
[09:20:19] + 235520 bytes downloaded
[09:20:19] + 245760 bytes downloaded
[09:20:19] + 256000 bytes downloaded
[09:20:19] + 266240 bytes downloaded
[09:20:20] + 276480 bytes downloaded
[09:20:20] + 286720 bytes downloaded
[09:20:20] + 296960 bytes downloaded
[09:20:20] + 307200 bytes downloaded
[09:20:20] + 317440 bytes downloaded
[09:20:20] + 327680 bytes downloaded
[09:20:20] + 337920 bytes downloaded
[09:20:20] + 348160 bytes downloaded
[09:20:20] + 358400 bytes downloaded
[09:20:20] + 368640 bytes downloaded
[09:20:20] + 378880 bytes downloaded
[09:20:20] + 389120 bytes downloaded
[09:20:20] + 399360 bytes downloaded
[09:20:20] + 409600 bytes downloaded
[09:20:20] + 419840 bytes downloaded
[09:20:20] + 430080 bytes downloaded
[09:20:20] + 440320 bytes downloaded
[09:20:20] + 450560 bytes downloaded
[09:20:20] + 460800 bytes downloaded
[09:20:20] + 471040 bytes downloaded
[09:20:20] + 481280 bytes downloaded
[09:20:20] + 491520 bytes downloaded
[09:20:20] + 501760 bytes downloaded
[09:20:20] + 512000 bytes downloaded
[09:20:20] + 522240 bytes downloaded
[09:20:20] + 532480 bytes downloaded
[09:20:20] + 542720 bytes downloaded
[09:20:20] + 552960 bytes downloaded
[09:20:20] + 563200 bytes downloaded
[09:20:20] + 573440 bytes downloaded
[09:20:20] + 583680 bytes downloaded
[09:20:20] + 593920 bytes downloaded
[09:20:20] + 604160 bytes downloaded
[09:20:20] + 614400 bytes downloaded
[09:20:20] + 624640 bytes downloaded
[09:20:20] + 634880 bytes downloaded
[09:20:20] + 645120 bytes downloaded
[09:20:20] + 655360 bytes downloaded
[09:20:20] + 665600 bytes downloaded
[09:20:20] + 675840 bytes downloaded
[09:20:20] + 686080 bytes downloaded
[09:20:20] + 696320 bytes downloaded
[09:20:20] + 706560 bytes downloaded
[09:20:20] + 716800 bytes downloaded
[09:20:20] + 727040 bytes downloaded
[09:20:20] + 737280 bytes downloaded
[09:20:20] + 747520 bytes downloaded
[09:20:20] + 757760 bytes downloaded
[09:20:20] + 768000 bytes downloaded
[09:20:20] + 778240 bytes downloaded
[09:20:20] + 788480 bytes downloaded
[09:20:20] + 789667 bytes downloaded
[09:20:20] Verifying core Core_a1.fah...
[09:20:20] Signature is VALID
[09:20:20] 
[09:20:20] Trying to unzip core FahCore_a1.exe
[09:20:20] Decompressed FahCore_a1.exe (2035712 bytes) successfully
[09:20:25] + Core successfully engaged
[09:20:26] Deleting current work unit & continuing...
[09:20:26] Using generic mpiexec calls
[09:22:30] - Preparing to get new work unit...
[09:22:30] + Attempting to get work packet
[09:22:30] - Connecting to assignment server
[09:22:30] - Successful: assigned to (171.64.65.64).
[09:22:30] + News From Folding@Home: Welcome to Folding@Home
[09:22:30] Loaded queue successfully.
[09:22:31] - Attempt #1  to get work failed, and no other work to do.
Waiting before retry.
[09:22:47] + Attempting to get work packet
[09:22:47] - Connecting to assignment server
[09:22:47] - Successful: assigned to (171.64.65.64).
[09:22:47] + News From Folding@Home: Welcome to Folding@Home
[09:22:47] Loaded queue successfully.
[09:23:02] + Closed connections
[09:23:07] 
[09:23:07] + Processing work unit
[09:23:07] Work type a1 not eligible for variable processors
[09:23:07] Core required: FahCore_a1.exe
[09:23:07] Core found.
[09:23:07] Using generic mpiexec calls
[09:23:07] Working on queue slot 08 [August 16 09:23:07 UTC]
[09:23:07] + Working ...
[09:23:07] 
[09:23:07] *------------------------------*
[09:23:07] Folding@Home Gromacs SMP Core
[09:23:07] Version 1.74 (March 10, 2007)
[09:23:07] 
[09:23:07] Preparing to commence simulation
[09:23:07] - Ensuring status. Please wait.
[09:23:12] - Starting from initial work packet
[09:23:12] 
[09:23:12] Project: 2665 (Run 2, Clone 548, Gen 39)
[09:23:12] 
[09:23:12] Assembly optimizations on if available.
[09:23:12] Entering M.D.
[09:23:32]  percent)
[09:23:33] - Starting from initial work packet
[09:23:33] 
[09:23:33] Project: 2665 (Run 2, Clone 548, Gen 39)
[09:23:33] 
[09:23:34] Entering M.D.
[09:23:41] Rejecting checkpoint
[09:23:42] Protein: HGG with glycosylations
[09:23:43] Writing local files
[09:23:49] Extra SSE boost OK.
[09:23:50] Writing local files
[09:23:50] Completed 0 out of 250000 steps  (0 percent)
[09:40:21] Writing local files
[09:40:21] Completed 2500 out of 250000 steps  (1 percent)
[09:56:51] Writing local files
[09:56:51] Completed 5000 out of 250000 steps  (2 percent)
[10:13:22] Writing local files
[10:13:23] Completed 7500 out of 250000 steps  (3 percent)
[10:29:56] Writing local files
[10:29:56] Completed 10000 out of 250000 steps  (4 percent)
[10:46:27] Writing local files
[10:46:27] Completed 12500 out of 250000 steps  (5 percent)
[11:03:05] Writing local files
[11:03:05] Completed 15000 out of 250000 steps  (6 percent)
[11:20:13] Writing local files
[11:20:13] Completed 17500 out of 250000 steps  (7 percent)
[11:37:16] Writing local files
[11:37:16] Completed 20000 out of 250000 steps  (8 percent)
[11:54:24] Writing local files
[11:54:24] Completed 22500 out of 250000 steps  (9 percent)
[12:11:32] Writing local files
[12:11:32] Completed 25000 out of 250000 steps  (10 percent)
[12:28:33] Writing local files
[12:28:33] Completed 27500 out of 250000 steps  (11 percent)
[12:45:18] Writing local files
[12:45:19] Completed 30000 out of 250000 steps  (12 percent)
[13:01:24] Writing local files
[13:01:24] Completed 32500 out of 250000 steps  (13 percent)
[13:19:40] Writing local files
[13:19:40] Completed 35000 out of 250000 steps  (14 percent)
toTOW
Site Moderator
Posts: 6349
Joined: Sun Dec 02, 2007 10:38 am
Location: Bordeaux, France
Contact:

Re: Project: 2665 (Run 0, Clone 479, Gen 20)

Post by toTOW »

There is multiple reports of partial credit for this one, but no one completed it successfully.
Image

Folding@Home beta tester since 2002. Folding Forum moderator since July 2008.
Zagen30
Posts: 823
Joined: Tue Mar 25, 2008 12:45 am
Hardware configuration: Core i7 3770K @3.5 GHz (not folding), 8 GB DDR3 @2133 MHz, 2xGTX 780 @1215 MHz, Windows 7 Pro 64-bit running 7.3.6 w/ 1xSMP, 2xGPU

4P E5-4650 @3.1 GHz, 64 GB DDR3 @1333MHz, Ubuntu Desktop 13.10 64-bit

Re: Project: 2665 (Run 0, Clone 479, Gen 20)

Post by Zagen30 »

Just got it today, and it seems to have failed just like everyone else's attempts:

Code: Select all

[04:49:19] Preparing to commence simulation
[04:49:19] - Looking at optimizations...
[04:49:19] - Created dyn
[04:49:19] - Files status OK
[04:49:27] - Expanded 4735055 -> 24426905 (decompressed 515.8 percent)
[04:49:27] - Starting from initial work packet
[04:49:27] 
[04:49:27] Project: 2665 (Run 0, Clone 479, Gen 20)
[04:49:27] 
[04:49:28] Assembly optimizations on if available.
[04:49:28] Entering M.D.
[04:49:48] al work packet
[04:49:48] 
[04:49:48] Project: 2665 (Run 0, Clone 479, Gen 20)
[04:49:48] 
[04:49:52] Entering M.D.
[04:49:56] ne 479, Gen 20)
[04:49:56] 
[04:49:57] Entering M.D.
[04:50:04] Rejecting checkpoint
[04:50:08] Protein: HGG in water
[04:50:08] Writing local files
[04:50:22] Extra SSE boost OK.
[04:50:22] Writing local files
[04:50:23] ile size: 9422
[04:50:23] - Writing 9958 bytes of core data to disk...
[04:50:23]   ... Done.
[04:50:23] - Failed to delete work/wudata_06.arc
[04:50:23] - Failed led to delete work- Failed to delete work/wudata_06.arc
[04:50:23] - Failed to delWarning:  check for stray files
[04:50:23] to delete work/wudata_06.bed
[04:50:23] - Failed to delete work/wudata_06.sas
[04:50:23] - Failed to delete work/wudata_06.goe
[04:50:23] Warning:  check for stray files
[04:52:23] 
[04:52:23] Folding@home Core Shutdown: EARLY_UNIT_END
[04:52:23] Finalizing output
[04:52:27] CoreStatus = 7B (123)
[04:52:27] Client-core communications error: ERROR 0x7b
[04:52:27] Deleting current work unit & continuing...
[04:54:32] - Preparing to get new work unit...
[04:54:32] + Attempting to get work packet
[04:54:32] - Connecting to assignment server
[04:54:32] - Successful: assigned to (171.64.65.64).
[04:54:32] + News From Folding@Home: Welcome to Folding@Home
[04:54:33] Loaded queue successfully.
[04:54:54] + Closed connections
[04:54:59] 
[04:54:59] + Processing work unit
[04:54:59] Core required: FahCore_a1.exe
[04:54:59] Core found.
[04:54:59] Working on Unit 07 [August 19 04:54:59]
[04:54:59] + Working ...
[04:54:59] 
[04:54:59] *------------------------------*
[04:54:59] Folding@Home Gromacs SMP Core
[04:54:59] Version 1.74 (March 10, 2007)
[04:54:59] 
[04:54:59] Preparing to commence simulation
[04:54:59] - Ensuring status. Please wait.
[04:55:08] - Starting from initial work packet
[04:55:08] 
[04:55:08] Project: 2665 (Run 0, Clone 479, Gen 20)
[04:55:08] 
[04:55:08] Assembly optimizations on if available.
[04:55:08] Entering M.D.
[04:55:35] al work packet
[04:55:35] 
[04:55:35] Project: 2665 (Run 0, Clone 479, Gen 20)
[04:55:35] 
[04:55:37] 65 (Run 0, Clone 479, Gen 20)
[04:55:37] 
[04:55:40] Entering M.D.
[04:55:49] GG in water
[04:55:49] Writing local files
[04:55:49] cal files
[04:55:50] Extra SSE boost OK.
[04:56:04] cal files
[04:56:04] Completed 0 out of 250000 steps  (0 percent)
[04:56:04] Gromacs cannot continue further.
[04:56:04] Going to send back what have done.
[04:56:04] logfile size: 9422
[04:56:04] - Writing 9958 bytes of core data to disk...
[04:56:04]   ... Done.
[04:56:04] ed to delete work/wudata_07.goe
[04:56:04] Warning:  check for stray files
[04:56:04] led to delete work/wudata_07.sas
[04:56:04] - Failed to delete work/wudata_07.goe
[04:56:04] Warning:  check for stray files
[04:56:04] e
[04:56:04] Warning:  check for stray files
[04:56:04] 
[04:56:04] Folding@home Core Shutdown: EARLY_UNIT_END
[04:56:04] Finalizing output

Folding@Home Client Shutdown at user request.

Folding@Home Client Shutdown.


--- Opening Log file [August 19 04:57:29] 


# SMP Client ##################################################################
###############################################################################

                       Folding@Home Client Version 5.91beta6

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: C:\Users\Kyle\FAH
Executable: C:\Users\Kyle\FAH\fah-SMP-591.exe


[04:57:29] - Ask before connecting: No
[04:57:29] - User name: Zagen30 (Team 0)
[04:57:29] - User ID: 4B0CBF697DF8B48F
[04:57:29] - Machine ID: 2
[04:57:29] 
[04:57:29] Work directory not found. Creating...
[04:57:29] Loaded queue successfully.
[04:57:29] 
[04:57:29] + Processing work unit
[04:57:29] Core required: FahCore_a1.exe
[04:57:29] Core found.
[04:57:29] Working on Unit 07 [August 19 04:57:29]
[04:57:29] + Working ...
[04:57:29] 
[04:57:29] *------------------------------*
[04:57:29] Folding@Home Gromacs SMP Core
[04:57:29] Version 1.74 (March 10, 2007)
[04:57:29] 
[04:57:29] Preparing to commence simulation
[04:57:29] - Looking at optimizations...
[04:57:29] - Created dyn
[04:57:29] - Files status OK
[04:57:29] 
[04:57:29] Folding@home Core Shutdown: MISSING_WORK_FILES
[04:57:29] Finalizing output
[04:57:47] ation of core was improper.
[04:57:47] - Going to use standard loops.
[04:57:47] - Files status OK
[04:59:46] 
[04:59:46] Folding@home Core Shutdown: MISSING_WORK_FILES
[04:59:46] Finalizing output
[04:59:49] CoreStatus = 1 (1)
[04:59:49] Client-core communications error: ERROR 0x1
[04:59:49] Deleting current work unit & continuing...
[05:02:09] - Preparing to get new work unit...
[05:02:09] + Attempting to get work packet
[05:02:09] - Connecting to assignment server
[05:02:10] - Successful: assigned to (171.64.65.64).
[05:02:10] + News From Folding@Home: Welcome to Folding@Home
[05:02:10] Loaded queue successfully.
[05:02:30] + Closed connections
[05:02:35] 
[05:02:35] + Processing work unit
[05:02:35] Core required: FahCore_a1.exe
[05:02:35] Core found.
[05:02:35] Working on Unit 08 [August 19 05:02:35]
[05:02:35] + Working ...
[05:02:36] 
[05:02:36] *------------------------------*
[05:02:36] Folding@Home Gromacs SMP Core
[05:02:36] Version 1.74 (March 10, 2007)
[05:02:36] 
[05:02:36] Preparing to commence simulation
[05:02:36] - Ensuring status. Please wait.
[05:02:53] - Looking at optimizations...
[05:02:53] - Working with standard loops on this execution.
[05:02:53] - Previous termination of core was improper.
[05:02:53] - Going to use standard loops.
[05:02:53] - Files status OK
[05:03:13] (decompressed 515.8 percent)
[05:03:13] - Starting from initial work packet
[05:03:14] 
[05:03:14] Project: 2665 (Run 0, Clone 479, Gen 20)
[05:03:14] 
[05:03:16] Entering M.D.
[05:03:19] ne 479, Gen 20)
[05:03:19] 
[05:03:21] Entering M.D.
[05:03:28] Rejecting checkpoint
[05:03:30] Protein: HGG in water
[05:03:30] Writing local files
[05:03:42] Extra SSE boost OK.
[05:03:44] Writing local files
[05:03:44] Completed 0 out of 250000 steps  (0 percent)
[05:03:44] 
[05:03:44] - Writing 9958 bytes of core data to disk...
[05:03:44]   ... Done.
[05:03:44] - Failed to delete work/wudata_08.arc
[05:03:44] - Failed to delete work/wudata_08.xtc
[05:03:45] ... Done.
[05:03:45] - Failed to delete work/wudata_08.arc
[05:03:45] - Failed to delete work/wudata_08.sas
[05:03:45] - Failed to delete work/wudata_08.goe
[05:03:45] Warning:  check for stray files
[05:03:45] ome Core Shutdown: EARLY_UNIT_END
[05:03:45] Finalizing output
Image
mikeb12
Posts: 28
Joined: Tue Feb 12, 2008 11:51 am
Location: South Carolina USA

Re: Project: 2665 (Run 0, Clone 479, Gen 20)

Post by mikeb12 »

just got this little boogar again last night... it had already failed 3 times and moved on by the time I saw it this morning, so no qfix results.
vista 64 6.22r3 mpich
0x7b

at least this time it never made it past 0%, so at least there wasn't a lot of waste.

Code: Select all

[04:29:59] Folding@home Core Shutdown: FINISHED_UNIT
[04:30:05] CoreStatus = 64 (100)
[04:30:05] Sending work to server
[04:30:05] Project: 2665 (Run 2, Clone 236, Gen 52)


[04:30:05] + Attempting to send results [September 26 04:30:05 UTC]
[04:35:54] + Results successfully sent
[04:35:54] Thank you for your contribution to Folding@Home.
[04:35:54] + Number of Units Completed: 28

[04:35:55] Using generic mpiexec calls
[04:37:57] - Preparing to get new work unit...
[04:37:57] + Attempting to get work packet
[04:37:57] - Connecting to assignment server
[04:37:58] - Successful: assigned to (171.64.65.64).
[04:37:58] + News From Folding@Home: Welcome to Folding@Home
[04:37:58] Loaded queue successfully.
[04:38:29] + Closed connections
[04:38:29] 
[04:38:29] + Processing work unit
[04:38:29] Work type a1 not eligible for variable processors
[04:38:29] Core required: FahCore_a1.exe
[04:38:29] Core found.
[04:38:29] Using generic mpiexec calls
[04:38:29] Working on queue slot 02 [September 26 04:38:29 UTC]
[04:38:29] + Working ...
[04:38:30] 
[04:38:30] *------------------------------*
[04:38:30] Folding@Home Gromacs SMP Core
[04:38:30] Version 1.74 (March 10, 2007)
[04:38:30] 
[04:38:30] Preparing to commence simulation
[04:38:30] - Ensuring status. Please wait.
[04:38:35] - Starting from initial work packet
[04:38:35] 
[04:38:35] Project: 2665 (Run 0, Clone 479, Gen 20)
[04:38:35] 
[04:38:35] Assembly optimizations on if available.
[04:38:35] Entering M.D.
[04:38:56] al work packet
[04:38:56] 
[04:38:56] Project: 2665 (Run 0, Clone 479, Gen 20)
[04:38:56] 
[04:38:58] Entering M.D.
[04:38:59] ne 479, Gen 20)
[04:38:59] 
[04:39:00] Entering M.D.
[04:39:07] Rejecting checkpoint
[04:39:09] 
[04:39:09] Writing local files
[04:39:10] 
[04:39:10] Writing local files
[04:39:20] Extra SSE boost OK.
[04:39:20] Writing local files
[04:39:21] ile size: 9422
[04:39:21] - Writing 9958 bytes of core dGromacs cannot continue further.
[04:39:21] Going to send back what have done.
[04:39:21] logfile size: 9422
[04:39:21] - Writing 9958 bytes of core data to disk...
[04:39:21]   ... Done.
[04:39:21] ailed to delete work/wudata_02.sas
[04:39:21] - Failed to delete work/wudata_02.goe
[04:39:21] Warning:  check for stray files
[04:39:21] arning:  check for stray files
[04:41:21] RLY_UNIT_END
[04:41:21] Finalizing output
[04:41:21] RLY_UNIT_END
[04:41:21] Finalizing output
[04:41:25] CoreStatus = 7B (123)
[04:41:25] Client-core communications error: ERROR 0x7b
[04:41:25] Deleting current work unit & continuing...
[04:41:25] Using generic mpiexec calls
[04:43:27] - Preparing to get new work unit...
[04:43:27] + Attempting to get work packet
[04:43:27] - Connecting to assignment server
[04:43:28] - Successful: assigned to (171.64.65.64).
[04:43:28] + News From Folding@Home: Welcome to Folding@Home
[04:43:28] Loaded queue successfully.
[04:43:59] + Closed connections
[04:44:04] 
[04:44:04] + Processing work unit
[04:44:04] Work type a1 not eligible for variable processors
[04:44:04] Core required: FahCore_a1.exe
[04:44:04] Core found.
[04:44:04] Using generic mpiexec calls
[04:44:04] Working on queue slot 03 [September 26 04:44:04 UTC]
[04:44:04] + Working ...
[04:44:04] 
[04:44:04] *------------------------------*
[04:44:04] Folding@Home Gromacs SMP Core
[04:44:04] Version 1.74 (March 10, 2007)
[04:44:04] 
[04:44:04] Preparing to commence simulation
[04:44:04] - Ensuring status. Please wait.
[04:44:10] - Starting from initial work packet
[04:44:10] 
[04:44:10] Project: 2665 (Run 0, Clone 479, Gen 20)
[04:44:10] 
[04:44:10] Assembly optimizations on if available.
[04:44:10] Entering M.D.
[04:44:30]  percent)
[04:44:31] - Starting from initial work packet
[04:44:31] 
[04:44:31] Project: 2665 (Run 0, Clone 479, Gen 20)
[04:44:31] 
[04:44:32] Entering M.D.
[04:44:41] Rejecting checkpoint
[04:44:42] 
[04:44:42] Writing local files
[04:44:43] 
[04:44:43] Writing local files
[04:44:50] Extra SSE boost OK.
[04:44:51] Writing local files
[04:44:51]  send back what have done.
[04:44:51] logfile size: 9422Gromacs cannot continue further.
[04:44:51] Going to send back what have done.
[04:44:51] logfile size: 9422
[04:44:51] - Writing 9958 bytes of core data to disk...
[04:44:51]   ... Done.
[04:44:51] ailed to delete work/wudata_03.sas
[04:44:51] - Failed to delete work/wudata_03.goe
[04:44:51] Warning:  check for stray files
[04:44:51] ork/wudata_03.goe
[04:44:51] Warning:  check for stray files
[04:46:51] zing output
[04:46:51] e Core Shutdown: EARLY_UNIT_END
[04:46:51] Finalizing output
[04:46:55] CoreStatus = 7B (123)
[04:46:55] Client-core communications error: ERROR 0x7b
[04:46:55] Deleting current work unit & continuing...
[04:46:55] Using generic mpiexec calls
[04:48:58] - Preparing to get new work unit...
[04:48:58] + Attempting to get work packet
[04:48:58] - Connecting to assignment server
[04:48:58] - Successful: assigned to (171.64.65.64).
[04:48:58] + News From Folding@Home: Welcome to Folding@Home
[04:48:59] Loaded queue successfully.
[04:49:30] + Closed connections
[04:49:35] 
[04:49:35] + Processing work unit
[04:49:35] Work type a1 not eligible for variable processors
[04:49:35] Core required: FahCore_a1.exe
[04:49:35] Core found.
[04:49:35] Using generic mpiexec calls
[04:49:35] Working on queue slot 04 [September 26 04:49:35 UTC]
[04:49:35] + Working ...
[04:49:36] 
[04:49:36] *------------------------------*
[04:49:36] Folding@Home Gromacs SMP Core
[04:49:36] Version 1.74 (March 10, 2007)
[04:49:36] 
[04:49:36] Preparing to commence simulation
[04:49:36] - Ensuring status. Please wait.
[04:49:41] - Starting from initial work packet
[04:49:41] 
[04:49:41] Project: 2665 (Run 0, Clone 479, Gen 20)
[04:49:41] 
[04:49:41] Assembly optimizations on if available.
[04:49:41] Entering M.D.
[04:50:02] al work packet
[04:50:02] 
[04:50:02] Project: 2665 (Run 0, Clone 479, Gen 20)
[04:50:02] 
[04:50:03] 65 (Run 0, Clone 479, Gen 20)
[04:50:03] 
[04:50:03] Entering M.D.
[04:50:12] Rejecting checkpoint
[04:50:13] 
[04:50:13] Writing local files
[04:50:13] 
[04:50:13] Writing local files
[04:50:20] Extra SSE boost OK.
[04:50:21] Writing local files
[04:50:21] ile size: 9422
[04:50:21] - Writing 9958 bytes of core dGromacs cannot continue further.
[04:50:21] Going to send back what have done.
[04:50:21] logfile size: 9422
[04:50:21] - Writing 9958 bytes of core data to disk...
[04:50:21]   ... Done.
[04:50:21] ailed to delete work/wudata_04.sas
[04:50:21] - Failed to delete work/wudata_04.goe
[04:50:21] Warning:  check for stray files
[04:50:21] led to delete work/wudata_04.goe
[04:50:21] Warning:  check for stray files
[04:50:21] 
[04:50:21] Folding@home Core Shutdown: EARLY_UNIT_END
[04:50:21] Finalizing output
[04:52:25] CoreStatus = 7B (123)
[04:52:25] Client-core communications error: ERROR 0x7b
[04:52:25] - Attempting to download new core...
[04:52:25] + Downloading new core: FahCore_a1.exe
[04:52:26] + 10240 bytes downloaded
[04:52:26] + 20480 bytes downloaded
[04:52:26] + 30720 bytes downloaded
[04:52:26] + 40960 bytes downloaded
[04:52:26] + 51200 bytes downloaded
[04:52:26] + 61440 bytes downloaded
[04:52:26] + 71680 bytes downloaded
[04:52:26] + 81920 bytes downloaded
[04:52:26] + 92160 bytes downloaded
[04:52:26] + 102400 bytes downloaded
[04:52:26] + 112640 bytes downloaded
[04:52:26] + 122880 bytes downloaded
[04:52:27] + 133120 bytes downloaded
[04:52:27] + 143360 bytes downloaded
[04:52:27] + 153600 bytes downloaded
[04:52:27] + 163840 bytes downloaded
[04:52:27] + 174080 bytes downloaded
[04:52:27] + 184320 bytes downloaded
[04:52:27] + 194560 bytes downloaded
[04:52:27] + 204800 bytes downloaded
[04:52:27] + 215040 bytes downloaded
[04:52:27] + 225280 bytes downloaded
[04:52:27] + 235520 bytes downloaded
[04:52:27] + 245760 bytes downloaded
[04:52:27] + 256000 bytes downloaded
[04:52:27] + 266240 bytes downloaded
[04:52:27] + 276480 bytes downloaded
[04:52:27] + 286720 bytes downloaded
[04:52:27] + 296960 bytes downloaded
[04:52:28] + 307200 bytes downloaded
[04:52:28] + 317440 bytes downloaded
[04:52:28] + 327680 bytes downloaded
[04:52:28] + 337920 bytes downloaded
[04:52:28] + 348160 bytes downloaded
[04:52:28] + 358400 bytes downloaded
[04:52:28] + 368640 bytes downloaded
[04:52:28] + 378880 bytes downloaded
[04:52:28] + 389120 bytes downloaded
[04:52:28] + 399360 bytes downloaded
[04:52:28] + 409600 bytes downloaded
[04:52:28] + 419840 bytes downloaded
[04:52:28] + 430080 bytes downloaded
[04:52:28] + 440320 bytes downloaded
[04:52:28] + 450560 bytes downloaded
[04:52:28] + 460800 bytes downloaded
[04:52:28] + 471040 bytes downloaded
[04:52:28] + 481280 bytes downloaded
[04:52:28] + 491520 bytes downloaded
[04:52:29] + 501760 bytes downloaded
[04:52:29] + 512000 bytes downloaded
[04:52:29] + 522240 bytes downloaded
[04:52:29] + 532480 bytes downloaded
[04:52:29] + 542720 bytes downloaded
[04:52:29] + 552960 bytes downloaded
[04:52:29] + 563200 bytes downloaded
[04:52:29] + 573440 bytes downloaded
[04:52:29] + 583680 bytes downloaded
[04:52:29] + 593920 bytes downloaded
[04:52:29] + 604160 bytes downloaded
[04:52:29] + 614400 bytes downloaded
[04:52:29] + 624640 bytes downloaded
[04:52:29] + 634880 bytes downloaded
[04:52:29] + 645120 bytes downloaded
[04:52:29] + 655360 bytes downloaded
[04:52:29] + 665600 bytes downloaded
[04:52:29] + 675840 bytes downloaded
[04:52:29] + 686080 bytes downloaded
[04:52:30] + 696320 bytes downloaded
[04:52:30] + 706560 bytes downloaded
[04:52:30] + 716800 bytes downloaded
[04:52:30] + 727040 bytes downloaded
[04:52:30] + 737280 bytes downloaded
[04:52:30] + 747520 bytes downloaded
[04:52:30] + 757760 bytes downloaded
[04:52:30] + 768000 bytes downloaded
[04:52:30] + 778240 bytes downloaded
[04:52:30] + 788480 bytes downloaded
[04:52:30] + 789667 bytes downloaded
[04:52:30] Verifying core Core_a1.fah...
[04:52:30] Signature is VALID
[04:52:30] 
[04:52:30] Trying to unzip core FahCore_a1.exe
[04:52:30] Decompressed FahCore_a1.exe (2035712 bytes) successfully
[04:52:35] + Core successfully engaged
[04:52:35] Deleting current work unit & continuing...
[04:52:35] Using generic mpiexec calls
[04:54:38] - Preparing to get new work unit...
[04:54:38] + Attempting to get work packet
[04:54:38] - Connecting to assignment server
[04:54:39] - Successful: assigned to (171.64.65.64).
[04:54:39] + News From Folding@Home: Welcome to Folding@Home
[04:54:39] Loaded queue successfully.
[04:54:40] - Attempt #1  to get work failed, and no other work to do.
Waiting before retry.
[04:54:47] + Attempting to get work packet
[04:54:47] - Connecting to assignment server
[04:54:48] - Successful: assigned to (171.64.65.64).
[04:54:48] + News From Folding@Home: Welcome to Folding@Home
[04:54:48] Loaded queue successfully.
[04:55:22] + Closed connections
[04:55:27] 
[04:55:27] + Processing work unit
[04:55:27] Work type a1 not eligible for variable processors
[04:55:27] Core required: FahCore_a1.exe
[04:55:27] Core found.
[04:55:27] Using generic mpiexec calls
[04:55:27] Working on queue slot 05 [September 26 04:55:27 UTC]
[04:55:27] + Working ...
[04:55:27] 
[04:55:27] *------------------------------*
[04:55:27] Folding@Home Gromacs SMP Core
[04:55:27] Version 1.74 (March 10, 2007)
[04:55:27] 
[04:55:27] Preparing to commence simulation
[04:55:27] - Ensuring status. Please wait.
[04:55:32] - Starting from initial work packet
[04:55:33] 
[04:55:33] Project: 2665 (Run 1, Clone 239, Gen 53)
[04:55:33] 
[04:55:33] Assembly optimizations on if available.
[04:55:33] Entering M.D.
[04:55:53]  percent)
[04:55:53] - Starting from initial work packet
[04:55:53] 
[04:55:53] Project: 2665 (Run 1, Clone 239, Gen 53)
[04:55:53] 
[04:55:56] Entering M.D.
[04:56:03] Rejecting checkpoint
[04:56:04] 
[04:56:04] Writing local files
[04:56:05] 
[04:56:06] Writing local files
[04:56:12] Extra SSE boost OK.
[04:56:12] Writing local files
[04:56:13] Completed 0 out of 250000 steps  (0 percent)
[05:14:09] Writing local files
[05:14:09] Completed 2500 out of 250000 steps  (1 percent)
[05:30:56] Writing local files
[05:30:57] Completed 5000 out of 250000 steps  (2 percent)
[05:47:47] Writing local files
[05:47:47] Completed 7500 out of 250000 steps  (3 percent)
[06:04:39] Writing local files
[06:04:40] Completed 10000 out of 250000 steps  (4 percent)
[06:21:27] Writing local files
[06:21:28] Completed 12500 out of 250000 steps  (5 percent)
[06:38:43] Writing local files
[06:38:43] Completed 15000 out of 250000 steps  (6 percent)
[06:55:31] Writing local files
[06:55:32] Completed 17500 out of 250000 steps  (7 percent)
[07:12:19] Writing local files
[07:12:19] Completed 20000 out of 250000 steps  (8 percent)
[07:29:11] Writing local files
[07:29:11] Completed 22500 out of 250000 steps  (9 percent)
[07:46:00] Writing local files
[07:46:00] Completed 25000 out of 250000 steps  (10 percent)
[08:02:57] Writing local files
[08:02:58] Completed 27500 out of 250000 steps  (11 percent)
[08:19:49] Writing local files
[08:19:49] Completed 30000 out of 250000 steps  (12 percent)
[08:36:41] Writing local files
[08:36:41] Completed 32500 out of 250000 steps  (13 percent)
[08:53:33] Writing local files
[08:53:33] Completed 35000 out of 250000 steps  (14 percent)
nwkelley
Pande Group Member
Posts: 57
Joined: Wed May 14, 2008 9:43 pm

Re: Project: 2665 (Run 0, Clone 479, Gen 20)

Post by nwkelley »

i'll take this one out of queue...

(thanks toTOW for checking the WU history and frequency of failing, it is a great help. btw, our code for automating this process looks to be coming along nicely!)
ChelseaOilman
Posts: 1037
Joined: Sun Dec 02, 2007 3:47 pm
Location: Colorado @ 10,000 feet

Re: Project: 2665 (Run 0, Clone 479, Gen 20)

Post by ChelseaOilman »

nwkelley wrote:i'll take this one out of queue...
Thank you! This is only 1 of 5 threads started about this WU. It has a long history, starting on July 13, 2008.

Here are the other 4 threads:

http://foldingforum.org/viewtopic.php?f ... &sk=t&sd=a

http://foldingforum.org/viewtopic.php?f=19&t=5105

http://foldingforum.org/viewtopic.php?f=19&t=4267

http://foldingforum.org/viewtopic.php?f=19&t=3949
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