Code: Select all
[02:10:55] Writing local files
[02:10:55] Completed 250000 out of 250000 steps (100 percent)
[02:10:55] Writing final coordinates.
[02:10:57] Past main M.D. loop
[02:10:57] Will end MPI now
[02:11:57]
[02:11:57] Finished Work Unit:
[02:11:57] - Reading up to 21310704 from "work/wudata_06.arc": Read 21310704
[02:12:12] - Reading up to 558368 from "work/wudata_06.xtc": Read 558368
[02:12:12] goefile size: 0
[02:12:12] logfile size: 0
[02:12:12] Warning: Core could not open logfile.
[02:12:12] Leaving Run
[02:12:13] - Writing 21875444 bytes of core data to disk...
[02:12:19] ... Done.
[02:12:25] - Failed to delete work/wudata_06.sas
[02:12:25] - Failed to delete work/wudata_06.goe
[02:12:25] Warning: check for stray files
[02:12:25] - Shutting down core
[02:14:25]
[02:14:25] Folding@home Core Shutdown: FINISHED_UNIT
[02:14:25]
[02:14:25] Folding@home Core Shutdown: FINISHED_UNIT
[02:14:31] CoreStatus = 64 (100)
[02:14:31] Unit 6 finished with 67 percent of time to deadline remaining.
[02:14:31] Updated performance fraction: 0.623442
[02:14:31] Sending work to server
[02:14:31] Project: 2665 (Run 3, Clone 515, Gen 52)
[02:14:31] + Attempting to send results [September 28 02:14:31 UTC]
[02:14:31] - Reading file work/wuresults_06.dat from core
[02:14:33] (Read 21875444 bytes from disk)
[02:14:33] Connecting to http://171.64.65.64:8080/
[02:15:02] Posted data.
[02:15:03] Initial: 0000; - Uploaded at ~712 kB/s
[02:15:03] - Averaged speed for that direction ~687 kB/s
[02:15:03] + Results successfully sent
[02:15:03] Thank you for your contribution to Folding@Home.
[02:15:03] + Number of Units Completed: 14
[02:17:47] - Warning: Could not delete all work unit files (6): Core returned invalid code
[02:17:47] Trying to send all finished work units
[02:17:47] + No unsent completed units remaining.
[02:17:47] - Preparing to get new work unit...
[02:17:47] + Attempting to get work packet
[02:17:47] - Will indicate memory of 2046 MB
[02:17:47] - Connecting to assignment server
[02:17:47] Connecting to http://assign.stanford.edu:8080/
[02:17:48] Posted data.
[02:17:48] Initial: 40AB; - Successful: assigned to (171.64.65.64).
[02:17:48] + News From Folding@Home: Welcome to Folding@Home
[02:17:48] Loaded queue successfully.
[02:17:48] Connecting to http://171.64.65.64:8080/
[02:17:53] Posted data.
[02:17:53] Initial: 0000; - Receiving payload (expected size: 4749128)
[02:17:57] - Downloaded at ~1159 kB/s
[02:17:57] - Averaged speed for that direction ~1082 kB/s
[02:17:57] + Received work.
[02:17:57] Trying to send all finished work units
[02:17:57] + No unsent completed units remaining.
[02:17:57] + Closed connections
[02:17:57]
[02:17:57] + Processing work unit
[02:17:57] Work type a1 not eligible for variable processors
[02:17:57] Core required: FahCore_a1.exe
[02:17:57] Core found.
[02:17:57] Working on queue slot 07 [September 28 02:17:57 UTC]
[02:17:57] + Working ...
[02:17:57] - Calling 'mpiexec -np 4 -channel shm -env MPICH_USE_SMP_OPTIMIZATIONS 1 -host 127.0.0.1 FahCore_a1.exe -dir work/ -suffix 07 -cpu 98 -checkpoint 15 -forceasm -verbose -lifeline 5912 -version 622'
[02:18:03]
[02:18:03] *------------------------------*
[02:18:03] Folding@Home Gromacs SMP Core
[02:18:03] Version 1.76 (February 23, 2008)
[02:18:03]
[02:18:03] Preparing to commence simulation
[02:18:03] - Ensuring status. Please wait.
[02:18:20] - Assembly optimizations manually forced on.
[02:18:20] - Not checking prior termination.
[02:18:50] - Expanded 4748616 -> 24426905 (decompressed 514.4 percent)
[02:18:51] - Starting from initial work packet
[02:18:51]
[02:18:51] Project: 2665 (Run 3, Clone 403, Gen 44)
[02:18:51]
[02:18:58] ailed to delete - Failed to delete - Failed to delete Warning: check forWarning: check for stray files
[02:18:58] - Starting from initial work packet
[02:18:59]
[02:18:59] Project: 2665 (Run 3, Clone 403, Gen 44)
[02:18:59]
[02:19:02] Assembly optimizations on if available.
[02:19:02] Entering M.D.
[02:19:09] Rejecting checkpoint
[02:19:14] s
[02:19:14] otein: HGG in water
[02:19:15] Writing local files
[02:19:32] Extra SSE boost OK.
[02:19:33] Writing local files
[02:19:34] Completed 0 out of 250000 steps (0 percent)
[02:34:37] Timered checkpoint triggered.
[02:49:38] Timered checkpoint triggered.
[02:52:36] Writing local files
[02:52:36] Completed 2500 out of 250000 steps (1 percent)
[03:07:37] Timered checkpoint triggered.
[03:21:34] Writing local files
[03:21:34] Completed 5000 out of 250000 steps (2 percent)
[03:34:40] - Autosending finished units... [September 28 03:34:40 UTC]
[03:34:40] Trying to send all finished work units
[03:34:40] + No unsent completed units remaining.
[03:34:40] - Autosend completed
[03:36:35] Timered checkpoint triggered.
[03:51:30] Writing local files
[03:51:30] Completed 7500 out of 250000 steps (3 percent)
[04:06:31] Timered checkpoint triggered.
[04:21:32] Timered checkpoint triggered.
[04:22:21] Writing local files
[04:22:22] Completed 10000 out of 250000 steps (4 percent)
[04:37:23] Timered checkpoint triggered.
[04:52:24] Timered checkpoint triggered.
[04:52:43] Writing local files
[04:52:43] Completed 12500 out of 250000 steps (5 percent)
[05:07:44] Timered checkpoint triggered.
[05:22:45] Timered checkpoint triggered.
[05:23:17] Writing local files
[05:23:17] Completed 15000 out of 250000 steps (6 percent)
[05:38:19] Timered checkpoint triggered.
[05:53:21] Timered checkpoint triggered.
[05:53:43] Writing local files
[05:53:43] Completed 17500 out of 250000 steps (7 percent)
[06:08:44] Timered checkpoint triggered.
[06:23:45] Timered checkpoint triggered.
[06:24:01] Writing local files
[06:24:01] Completed 20000 out of 250000 steps (8 percent)
[06:39:03] Timered checkpoint triggered.
[06:54:04] Timered checkpoint triggered.
[06:54:21] Writing local files
[06:54:21] Completed 22500 out of 250000 steps (9 percent)
[07:09:22] Timered checkpoint triggered.
[07:24:24] Timered checkpoint triggered.
[07:24:37] Writing local files
[07:24:38] Completed 25000 out of 250000 steps (10 percent)
[07:39:38] Timered checkpoint triggered.
[07:54:39] Timered checkpoint triggered.
[07:55:06] Writing local files
[07:55:07] Completed 27500 out of 250000 steps (11 percent)
[08:10:09] Timered checkpoint triggered.
[08:25:10] Timered checkpoint triggered.
[08:25:33] Writing local files
[08:25:33] Completed 30000 out of 250000 steps (12 percent)
[08:40:33] Timered checkpoint triggered.
[08:55:34] Timered checkpoint triggered.
[08:55:57] Writing local files
[08:55:57] Completed 32500 out of 250000 steps (13 percent)
[09:10:58] Timered checkpoint triggered.
[09:25:59] Timered checkpoint triggered.
[09:26:20] Writing local files
[09:26:21] Completed 35000 out of 250000 steps (14 percent)
[09:34:40] - Autosending finished units... [September 28 09:34:40 UTC]
[09:34:40] Trying to send all finished work units
[09:34:40] + No unsent completed units remaining.
[09:34:40] - Autosend completed
[09:41:20] Timered checkpoint triggered.
[09:56:22] Timered checkpoint triggered.
[09:56:59] Writing local files
[09:56:59] Completed 37500 out of 250000 steps (15 percent)
[10:12:00] Timered checkpoint triggered.
[10:27:00] Timered checkpoint triggered.
[10:27:19] Writing local files
[10:27:20] Completed 40000 out of 250000 steps (16 percent)
[10:42:21] Timered checkpoint triggered.
[10:57:21] Timered checkpoint triggered.
[10:57:45] Writing local files
[10:57:46] Completed 42500 out of 250000 steps (17 percent)
[11:12:46] Timered checkpoint triggered.
[11:27:47] Timered checkpoint triggered.
[11:28:08] Writing local files
[11:28:08] Completed 45000 out of 250000 steps (18 percent)
[11:43:09] Timered checkpoint triggered.
[11:58:09] Timered checkpoint triggered.
[11:58:36] Writing local files
[11:58:37] Completed 47500 out of 250000 steps (19 percent)
[12:13:37] Timered checkpoint triggered.
[12:28:37] Timered checkpoint triggered.
[12:29:04] Writing local files
[12:29:04] Completed 50000 out of 250000 steps (20 percent)
[12:44:05] Timered checkpoint triggered.
[12:59:06] Timered checkpoint triggered.
[12:59:27] Writing local files
[12:59:27] Completed 52500 out of 250000 steps (21 percent)
[13:14:28] Timered checkpoint triggered.
[13:29:28] Timered checkpoint triggered.
[13:29:33] Writing local files
[13:29:33] Completed 55000 out of 250000 steps (22 percent)
[13:44:34] Timered checkpoint triggered.
[13:59:34] Timered checkpoint triggered.
[13:59:52] Writing local files
[13:59:53] Completed 57500 out of 250000 steps (23 percent)
[14:14:54] Timered checkpoint triggered.
[14:29:54] Timered checkpoint triggered.
[14:30:05] Writing local files
[14:30:05] Completed 60000 out of 250000 steps (24 percent)
[14:45:06] Timered checkpoint triggered.
[15:00:07] Timered checkpoint triggered.
[15:00:31] Writing local files
[15:00:31] Completed 62500 out of 250000 steps (25 percent)
[15:15:32] Timered checkpoint triggered.
[15:30:32] Timered checkpoint triggered.
[15:31:08] Writing local files
[15:31:08] Completed 65000 out of 250000 steps (26 percent)
[15:34:40] - Autosending finished units... [September 28 15:34:40 UTC]
[15:34:40] Trying to send all finished work units
[15:34:40] + No unsent completed units remaining.
[15:34:40] - Autosend completed
[15:46:08] Timered checkpoint triggered.
[16:01:08] Timered checkpoint triggered.
[16:01:40] Writing local files
[16:01:40] Completed 67500 out of 250000 steps (27 percent)
[16:16:41] Timered checkpoint triggered.
[16:31:43] Timered checkpoint triggered.
[16:32:06] Writing local files
[16:32:07] Completed 70000 out of 250000 steps (28 percent)
[16:47:07] Timered checkpoint triggered.
[17:02:08] Timered checkpoint triggered.
[17:02:32] Writing local files
[17:02:32] Completed 72500 out of 250000 steps (29 percent)
[17:17:33] Timered checkpoint triggered.
[17:32:34] Timered checkpoint triggered.
[17:32:56] Writing local files
[17:32:56] Completed 75000 out of 250000 steps (30 percent)
[17:47:57] Timered checkpoint triggered.
[18:02:58] Timered checkpoint triggered.
[18:03:19] Writing local files
[18:03:20] Completed 77500 out of 250000 steps (31 percent)
[18:18:21] Timered checkpoint triggered.
[18:33:23] Timered checkpoint triggered.
[18:33:45] Writing local files
[18:33:45] Completed 80000 out of 250000 steps (32 percent)
[18:48:47] Timered checkpoint triggered.
[18:49:33] Warning: long 1-4 interactions
[18:49:34] Gromacs cannot continue further.
[18:49:34] Going to send back what have done.
[18:49:34] logfile size: 70353
[18:49:34] - Writing 70889 bytes of core data to disk...
[18:49:34] ... Done.
[18:49:34] - Failed to delete work/wudata_07.sas
[18:49:34] - Failed to delete work/wudata_07.goe
[18:49:34] Warning: check for stray files
[18:49:34]
[18:49:34] Folding@home Core Shutdown: EARLY_UNIT_END
[18:49:34]
[18:49:34] Folding@home Core Shutdown: EARLY_UNIT_END
[18:49:41] CoreStatus = 63 (99)
[18:49:41] + Error starting Folding@Home core.
[18:49:46]
[18:49:46] + Processing work unit
[18:49:46] Work type a1 not eligible for variable processors
[18:49:46] Core required: FahCore_a1.exe
[18:49:46] Core found.
[18:49:46] Working on queue slot 07 [September 28 18:49:46 UTC]
[18:49:46] + Working ...
[18:49:46] - Calling 'mpiexec -np 4 -channel shm -env MPICH_USE_SMP_OPTIMIZATIONS 1 -host 127.0.0.1 FahCore_a1.exe -dir work/ -suffix 07 -cpu 98 -checkpoint 15 -forceasm -verbose -lifeline 5912 -version 622'
[18:49:48]
[18:49:48] *------------------------------*
[18:49:48] Folding@Home Gromacs SMP Core
[18:49:48] Version 1.76 (February 23, 2008)
[18:49:48]
[18:49:48] Preparing to commence simulation
[18:49:48] - Assembly optimizations manually forced on.
[18:49:48] - Not checking prior termination.
[18:49:48]
[18:49:48] Folding@home Core Shutdown: MISSING_WORK_FILES
[18:49:48] Finalizing output
[18:51:52] CoreStatus = 1 (1)
[18:51:52] Client-core communications error: ERROR 0x1
[18:51:52] Deleting current work unit & continuing...
[18:54:14] - Warning: Could not delete all work unit files (7): Core returned invalid code
[18:54:14] Trying to send all finished work units
[18:54:14] + No unsent completed units remaining.
[18:54:14] - Preparing to get new work unit...
[18:54:14] + Attempting to get work packet
[18:54:14] - Will indicate memory of 2046 MB
[18:54:14] - Connecting to assignment server
[18:54:14] Connecting to http://assign.stanford.edu:8080/
[18:54:15] Posted data.
[18:54:15] Initial: 40AB; - Successful: assigned to (171.64.65.64).
[18:54:15] + News From Folding@Home: Welcome to Folding@Home
[18:54:15] Loaded queue successfully.
[18:54:15] Connecting to http://171.64.65.64:8080/
[18:54:20] Posted data.
[18:54:20] Initial: 0000; - Receiving payload (expected size: 4749128)
[18:54:24] - Downloaded at ~1159 kB/s
[18:54:24] - Averaged speed for that direction ~1098 kB/s
[18:54:24] + Received work.
[18:54:24] + Closed connections
[18:54:29]
[18:54:29] + Processing work unit
[18:54:29] Work type a1 not eligible for variable processors
[18:54:29] Core required: FahCore_a1.exe
[18:54:29] Core found.
[18:54:29] Working on queue slot 08 [September 28 18:54:29 UTC]
[18:54:29] + Working ...
[18:54:29] - Calling 'mpiexec -np 4 -channel shm -env MPICH_USE_SMP_OPTIMIZATIONS 1 -host 127.0.0.1 FahCore_a1.exe -dir work/ -suffix 08 -cpu 98 -checkpoint 15 -forceasm -verbose -lifeline 5912 -version 622'
[18:54:33]
[18:54:33] *------------------------------*
[18:54:33] Folding@Home Gromacs SMP Core
[18:54:33] Version 1.76 (February 23, 2008)
[18:54:33]
[18:54:33] Preparing to commence simulation
[18:54:33] - Ensuring status. Please wait.
[18:54:50] - Assembly optimizations manually forced on.
[18:54:50] - Not checking prior termination.
[18:55:02] - Expanded 4748616 -> 24426905 (decompressed 514.4 percent)
[18:55:03] - Starting from initial work packet
[18:55:03]
[18:55:03] Project: 2665 (Run 3, Clone 403, Gen 44)
[18:55:03]
[18:55:19] ning: check for stray files
[18:55:19] - Starting from initial work packet
[18:55:19]
[18:55:19] Project: 2665 (Run 3, Clone 403, Gen 44)
[18:55:19]
[18:55:19] l work packet
[18:55:19]
[18:55:19] Project: 2665 (Run 3, Clone 403, Gen 44)
[18:55:19]
[18:55:22] Assembly optimizations on if available.
[18:55:22] Entering M.D.
[18:55:28] Rejecting checkpoint
[18:55:31] Protein: HGG in water
[18:55:31] Writing local files
[18:55:46] Extra SSE boost OK.
[18:55:46] Writing local files
[18:55:47] Completed 0 out of 250000 steps (0 percent)
[19:10:49] Timered checkpoint triggered.
[19:25:51] Timered checkpoint triggered.
[19:27:31] Writing local files
[19:27:32] Completed 2500 out of 250000 steps (1 percent)
[19:42:33] Timered checkpoint triggered.
[19:57:33] Timered checkpoint triggered.
[19:59:14] Writing local files
[19:59:14] Completed 5000 out of 250000 steps (2 percent)
[20:14:16] Timered checkpoint triggered.
[20:29:16] Timered checkpoint triggered.
[20:30:54] Writing local files
[20:30:54] Completed 7500 out of 250000 steps (3 percent)
[20:45:55] Timered checkpoint triggered.
[21:00:56] Timered checkpoint triggered.
[21:02:26] Writing local files
[21:02:26] Completed 10000 out of 250000 steps (4 percent)
[21:17:27] Timered checkpoint triggered.
[21:32:28] Timered checkpoint triggered.
[21:34:03] Writing local files
[21:34:03] Completed 12500 out of 250000 steps (5 percent)
[21:34:41] - Autosending finished units... [September 28 21:34:41 UTC]
[21:34:41] Trying to send all finished work units
[21:34:41] + No unsent completed units remaining.
[21:34:41] - Autosend completed
[21:49:05] Timered checkpoint triggered.
[22:04:05] Timered checkpoint triggered.
[22:05:38] Writing local files
[22:05:39] Completed 15000 out of 250000 steps (6 percent)
[22:20:40] Timered checkpoint triggered.
[22:35:43] Timered checkpoint triggered.
[22:37:14] Writing local files
[22:37:14] Completed 17500 out of 250000 steps (7 percent)
[22:52:16] Timered checkpoint triggered.
[23:07:17] Timered checkpoint triggered.
[23:08:50] Writing local files
[23:08:50] Completed 20000 out of 250000 steps (8 percent)
[23:23:51] Timered checkpoint triggered.
[23:38:51] Timered checkpoint triggered.
[23:40:25] Writing local files
[23:40:25] Completed 22500 out of 250000 steps (9 percent)
[23:55:26] Timered checkpoint triggered.
[00:10:27] Timered checkpoint triggered.
[00:12:04] Writing local files
[00:12:04] Completed 25000 out of 250000 steps (10 percent)
[00:27:05] Timered checkpoint triggered.
[00:42:05] Timered checkpoint triggered.
[00:43:41] Writing local files
[00:43:42] Completed 27500 out of 250000 steps (11 percent)
[00:58:44] Timered checkpoint triggered.
[01:13:45] Timered checkpoint triggered.
[01:15:18] Writing local files
[01:15:19] Completed 30000 out of 250000 steps (12 percent)
[01:30:20] Timered checkpoint triggered.
[01:45:21] Timered checkpoint triggered.
[01:46:53] Writing local files
[01:46:53] Completed 32500 out of 250000 steps (13 percent)
[02:01:54] Timered checkpoint triggered.
[02:16:54] Timered checkpoint triggered.
[02:18:30] Writing local files
[02:18:30] Completed 35000 out of 250000 steps (14 percent)
[02:33:31] Timered checkpoint triggered.
[02:48:31] Timered checkpoint triggered.
[02:50:12] Writing local files
[02:50:12] Completed 37500 out of 250000 steps (15 percent)
[03:05:13] Timered checkpoint triggered.
[03:20:12] Timered checkpoint triggered.
[03:21:46] Writing local files
[03:21:47] Completed 40000 out of 250000 steps (16 percent)
[03:34:41] - Autosending finished units... [September 29 03:34:41 UTC]
[03:34:41] Trying to send all finished work units
[03:34:41] + No unsent completed units remaining.
[03:34:41] - Autosend completed
[03:36:47] Timered checkpoint triggered.
[03:51:46] Timered checkpoint triggered.
[03:53:29] Writing local files
[03:53:29] Completed 42500 out of 250000 steps (17 percent)
[04:08:30] Timered checkpoint triggered.
[04:23:30] Timered checkpoint triggered.
[04:25:07] Writing local files
[04:25:08] Completed 45000 out of 250000 steps (18 percent)
[04:40:09] Timered checkpoint triggered.
[04:55:09] Timered checkpoint triggered.
[04:56:45] Writing local files
[04:56:45] Completed 47500 out of 250000 steps (19 percent)
[05:11:46] Timered checkpoint triggered.
[05:26:46] Timered checkpoint triggered.
[05:28:22] Writing local files
[05:28:22] Completed 50000 out of 250000 steps (20 percent)
[05:43:23] Timered checkpoint triggered.
[05:58:22] Timered checkpoint triggered.
[05:59:57] Writing local files
[05:59:58] Completed 52500 out of 250000 steps (21 percent)
[06:14:58] Timered checkpoint triggered.
[06:29:58] Timered checkpoint triggered.
[06:31:29] Writing local files
[06:31:29] Completed 55000 out of 250000 steps (22 percent)
[06:46:29] Timered checkpoint triggered.
[07:01:31] Timered checkpoint triggered.
[07:03:01] Writing local files
[07:03:01] Completed 57500 out of 250000 steps (23 percent)
[07:18:03] Timered checkpoint triggered.
[07:33:03] Timered checkpoint triggered.
[07:34:31] Writing local files
[07:34:32] Completed 60000 out of 250000 steps (24 percent)
[07:49:34] Timered checkpoint triggered.
[08:04:35] Timered checkpoint triggered.
[08:06:05] Writing local files
[08:06:05] Completed 62500 out of 250000 steps (25 percent)
[08:21:06] Timered checkpoint triggered.
[08:36:06] Timered checkpoint triggered.
[08:37:45] Writing local files
[08:37:45] Completed 65000 out of 250000 steps (26 percent)
[08:52:46] Timered checkpoint triggered.
[09:07:47] Timered checkpoint triggered.
[09:09:23] Writing local files
[09:09:23] Completed 67500 out of 250000 steps (27 percent)
[09:24:25] Timered checkpoint triggered.
[09:34:41] - Autosending finished units... [September 29 09:34:41 UTC]
[09:34:41] Trying to send all finished work units
[09:34:41] + No unsent completed units remaining.
[09:34:41] - Autosend completed
[09:39:25] Timered checkpoint triggered.
[09:40:58] Writing local files
[09:40:58] Completed 70000 out of 250000 steps (28 percent)
[09:55:58] Timered checkpoint triggered.
[10:11:00] Timered checkpoint triggered.
[10:12:38] Writing local files
[10:12:38] Completed 72500 out of 250000 steps (29 percent)
[10:27:40] Timered checkpoint triggered.
[10:42:40] Timered checkpoint triggered.
[10:44:14] Writing local files
[10:44:14] Completed 75000 out of 250000 steps (30 percent)
[10:59:15] Timered checkpoint triggered.
[11:14:16] Timered checkpoint triggered.
[11:15:51] Writing local files
[11:15:52] Completed 77500 out of 250000 steps (31 percent)
[11:30:52] Timered checkpoint triggered.
[11:45:52] Timered checkpoint triggered.
[11:47:30] Writing local files
[11:47:31] Completed 80000 out of 250000 steps (32 percent)
[12:02:31] Timered checkpoint triggered.
[12:03:48] Warning: long 1-4 interactions
[12:03:49] Gromacs cannot continue further.
[12:03:49] Going to send back what have done.
[12:03:49] logfile size: 70353
[12:03:49] - Writing 70889 bytes of core data to disk...
[12:03:49] ... Done.
[12:03:49] - Failed to delete work/wudata_08.sas
[12:03:49] - Failed to delete work/wudata_08.goe
[12:03:49] Warning: check for stray files
[12:03:49]
[12:03:49] Folding@home Core Shutdown: EARLY_UNIT_END
[12:03:49]
[12:03:49] Folding@home Core Shutdown: EARLY_UNIT_END
[12:03:56] CoreStatus = 63 (99)
[12:03:56] + Error starting Folding@Home core.
[12:03:56] - Attempting to download new core...
[12:03:56] + Downloading new core: FahCore_a1.exe
[12:03:56] Downloading core (/~pande/Win32/x86_Deino/Core_a1.fah from www.stanford.edu)
[12:03:57] Initial: AFDE; + 10240 bytes downloaded
[12:03:57] Initial: 10F0; + 20480 bytes downloaded
[12:03:57] Initial: DB70; + 30720 bytes downloaded
[12:03:57] Initial: 865E; + 40960 bytes downloaded
[12:03:57] Initial: 8F87; + 51200 bytes downloaded
[12:03:57] Initial: C48B; + 61440 bytes downloaded
[12:03:57] Initial: 92B3; + 71680 bytes downloaded
[12:03:57] Initial: C102; + 81920 bytes downloaded
[12:03:57] Initial: 1996; + 92160 bytes downloaded
[12:03:57] Initial: BFFE; + 102400 bytes downloaded
[12:03:57] Initial: 1810; + 112640 bytes downloaded
[12:03:57] Initial: 0626; + 122880 bytes downloaded
[12:03:57] Initial: 7B53; + 133120 bytes downloaded
[12:03:57] Initial: 0441; + 143360 bytes downloaded
[12:03:58] Initial: FECE; + 153600 bytes downloaded
[12:03:58] Initial: D346; + 163840 bytes downloaded
[12:03:58] Initial: 2DE8; + 174080 bytes downloaded
[12:03:58] Initial: B3F0; + 184320 bytes downloaded
[12:03:58] Initial: 2881; + 194560 bytes downloaded
[12:03:58] Initial: 9507; + 204800 bytes downloaded
[12:03:58] Initial: 1BAF; + 215040 bytes downloaded
[12:03:58] Initial: 717C; + 225280 bytes downloaded
[12:03:58] Initial: 23FD; + 235520 bytes downloaded
[12:03:58] Initial: 915F; + 245760 bytes downloaded
[12:03:58] Initial: CE52; + 256000 bytes downloaded
[12:03:58] Initial: ED88; + 266240 bytes downloaded
[12:03:58] Initial: 2579; + 276480 bytes downloaded
[12:03:58] Initial: 3396; + 286720 bytes downloaded
[12:03:58] Initial: 410C; + 296960 bytes downloaded
[12:03:58] Initial: 56D1; + 307200 bytes downloaded
[12:03:58] Initial: 1EBD; + 317440 bytes downloaded
[12:03:58] Initial: 6AD9; + 327680 bytes downloaded
[12:03:58] Initial: F931; + 337920 bytes downloaded
[12:03:58] Initial: 1C40; + 348160 bytes downloaded
[12:03:58] Initial: C4AE; + 358400 bytes downloaded
[12:03:58] Initial: 57E4; + 368640 bytes downloaded
[12:03:58] Initial: 1843; + 378880 bytes downloaded
[12:03:58] Initial: B0C0; + 389120 bytes downloaded
[12:03:58] Initial: AAAA; + 399360 bytes downloaded
[12:03:58] Initial: D737; + 409600 bytes downloaded
[12:03:58] Initial: 762A; + 419840 bytes downloaded
[12:03:58] Initial: 8685; + 430080 bytes downloaded
[12:03:58] Initial: 25B1; + 440320 bytes downloaded
[12:03:58] Initial: 44F1; + 450560 bytes downloaded
[12:03:58] Initial: EF81; + 460800 bytes downloaded
[12:03:58] Initial: 900E; + 471040 bytes downloaded
[12:03:58] Initial: 906E; + 481280 bytes downloaded
[12:03:58] Initial: D59F; + 491520 bytes downloaded
[12:03:58] Initial: 2406; + 501760 bytes downloaded
[12:03:58] Initial: 9777; + 512000 bytes downloaded
[12:03:58] Initial: 7783; + 522240 bytes downloaded
[12:03:58] Initial: AEC5; + 532480 bytes downloaded
[12:03:58] Initial: B8A1; + 542720 bytes downloaded
[12:03:58] Initial: D50E; + 552960 bytes downloaded
[12:03:58] Initial: BDEE; + 563200 bytes downloaded
[12:03:58] Initial: E433; + 573440 bytes downloaded
[12:03:58] Initial: 667A; + 583680 bytes downloaded
[12:03:58] Initial: C413; + 593920 bytes downloaded
[12:03:58] Initial: DB64; + 604160 bytes downloaded
[12:03:58] Initial: 313C; + 614400 bytes downloaded
[12:03:58] Initial: 4B8A; + 624640 bytes downloaded
[12:03:58] Initial: 1B3A; + 634880 bytes downloaded
[12:03:58] Initial: E39B; + 645120 bytes downloaded
[12:03:58] Initial: F9FD; + 655360 bytes downloaded
[12:03:58] Initial: BFF6; + 665600 bytes downloaded
[12:03:58] Initial: 0552; + 675840 bytes downloaded
[12:03:58] Initial: 14A7; + 686080 bytes downloaded
[12:03:58] Initial: 99A6; + 696320 bytes downloaded
[12:03:58] Initial: 06B2; + 706560 bytes downloaded
[12:03:58] Initial: 445D; + 716800 bytes downloaded
[12:03:58] Initial: 62C1; + 727040 bytes downloaded
[12:03:58] Initial: 0E27; + 737280 bytes downloaded
[12:03:58] Initial: EF9A; + 747520 bytes downloaded
[12:03:58] Initial: C105; + 757760 bytes downloaded
[12:03:58] Initial: 46D3; + 768000 bytes downloaded
[12:03:58] Initial: 33C7; + 778240 bytes downloaded
[12:03:58] Initial: 7E92; + 788480 bytes downloaded
[12:03:58] Initial: 24B3; + 795847 bytes downloaded
[12:03:58] Verifying core Core_a1.fah...
[12:03:58] Signature is VALID
[12:03:58]
[12:03:58] Trying to unzip core FahCore_a1.exe
[12:03:58] Decompressed FahCore_a1.exe (2117632 bytes) successfully
[12:04:03] + Core successfully engaged
[12:04:08]
[12:04:08] + Processing work unit
[12:04:08] Work type a1 not eligible for variable processors
[12:04:08] Core required: FahCore_a1.exe
[12:04:08] Core found.
[12:04:08] Working on queue slot 08 [September 29 12:04:08 UTC]
[12:04:08] + Working ...
[12:04:08] - Calling 'mpiexec -np 4 -channel shm -env MPICH_USE_SMP_OPTIMIZATIONS 1 -host 127.0.0.1 FahCore_a1.exe -dir work/ -suffix 08 -cpu 98 -checkpoint 15 -forceasm -verbose -lifeline 5912 -version 622'
[12:04:12]
[12:04:12] *------------------------------*
[12:04:12] Folding@Home Gromacs SMP Core
[12:04:12] Version 1.76 (February 23, 2008)
[12:04:12]
[12:04:12] Preparing to commence simulation
[12:04:12] - Ensuring status. Please wait.
[12:04:29] - Assembly optimizations manually forced on.
[12:04:29] - Not checking prior termination.
[12:06:29]
[12:06:29] Folding@home Core Shutdown: MISSING_WORK_FILES
[12:06:29] Finalizing output
[12:06:33] CoreStatus = 1 (1)
[12:06:33] Client-core communications error: ERROR 0x1
[12:06:33] Deleting current work unit & continuing...
[12:08:55] - Warning: Could not delete all work unit files (8): Core returned invalid code
[12:08:55] Trying to send all finished work units
[12:08:55] + No unsent completed units remaining.
[12:08:55] - Preparing to get new work unit...
[12:08:55] + Attempting to get work packet
[12:08:55] - Will indicate memory of 2046 MB
[12:08:55] - Connecting to assignment server
[12:08:55] Connecting to http://assign.stanford.edu:8080/
[12:08:55] Posted data.
[12:08:55] Initial: 40AB; - Successful: assigned to (171.64.65.64).
[12:08:55] + News From Folding@Home: Welcome to Folding@Home
[12:08:56] Loaded queue successfully.
[12:08:56] Connecting to http://171.64.65.64:8080/
[12:09:01] Posted data.
[12:09:01] Initial: 0000; - Receiving payload (expected size: 4749128)
[12:09:05] - Downloaded at ~1159 kB/s
[12:09:05] - Averaged speed for that direction ~1110 kB/s
[12:09:05] + Received work.
[12:09:05] + Closed connections
[12:09:10]
[12:09:10] + Processing work unit
[12:09:10] Work type a1 not eligible for variable processors
[12:09:10] Core required: FahCore_a1.exe
[12:09:10] Core found.
[12:09:10] Working on queue slot 09 [September 29 12:09:10 UTC]
[12:09:10] + Working ...
[12:09:10] - Calling 'mpiexec -np 4 -channel shm -env MPICH_USE_SMP_OPTIMIZATIONS 1 -host 127.0.0.1 FahCore_a1.exe -dir work/ -suffix 09 -cpu 98 -checkpoint 15 -forceasm -verbose -lifeline 5912 -version 622'
[12:09:11]
[12:09:11] *------------------------------*
[12:09:11] Folding@Home Gromacs SMP Core
[12:09:11] Version 1.76 (February 23, 2008)
[12:09:11]
[12:09:11] Preparing to commence simulation
[12:09:11] - Ensuring status. Please wait.
[12:09:28] - Assembly optimizations manually forced on.
[12:09:28] - Not checking prior termination.
[12:09:57] - Expanded 4748616 -> 24426905 (decompressed 514.4 percent)
[12:09:57] - Starting from initial work packet
[12:09:57]
[12:09:57] Project: 2665 (Run 3, Clone 403, Gen 44)
[12:09:57]
[12:10:00] ailed to delete - Failed to delete Warning: check for stray files
[12:10:00] - Starting from initial work packet
[12:10:00]
[12:10:00] Project: 2665 (Run 3, Clone 403, Gen 44)
[12:10:00]
[12:10:00] lone 403, Gen 44)
[12:10:00]
[12:10:03] Assembly optimizations on if available.
[12:10:03] Entering M.D.
[12:10:10] Rejecting checkpoint
[12:10:13] Protein: HGG in water
[12:10:13] Writing local files
[12:10:26] Extra SSE boost OK.
[12:10:27] Writing local files
[12:10:28] Completed 0 out of 250000 steps (0 percent)
