Code: Select all
@linuxfolding-preemptive:~$ sudo docker run --gpus all --name fah0 --volume $HOME/fah:/fah foldingathome/fah-gpu
16:11:39:Downloading GPUs.txt from assign1.foldingathome.org:80
16:11:39:Connecting to assign1.foldingathome.org:80
16:11:39:Read GPUs.txt
16:11:40:******************************* libFAH ********************************
16:11:40: Date: Oct 20 2020
16:11:40: Time: 20:36:39
16:11:40: Revision: 5ca109d295a6245e2a2f590b3d0085ad5e567aeb
16:11:40: Branch: master
16:11:40: Compiler: GNU 8.3.0
16:11:40: Options: -faligned-new -std=c++11 -fsigned-char -ffunction-sections
16:11:40: -fdata-sections -O3 -funroll-loops -fno-pie
16:11:40: Platform: linux2 5.8.0-1-amd64
16:11:40: Bits: 64
16:11:40: Mode: Release
16:11:40:****************************** FAHClient ******************************
16:11:40: Version: 7.6.21
16:11:40: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
16:11:40: Copyright: 2020 foldingathome.org
16:11:40: Homepage: https://foldingathome.org/
16:11:40: Date: Oct 20 2020
16:11:40: Time: 20:39:00
16:11:40: Revision: 6efbf0e138e22d3963e6a291f78dcb9c6422a278
16:11:40: Branch: master
16:11:40: Compiler: GNU 8.3.0
16:11:40: Options: -faligned-new -std=c++11 -fsigned-char -ffunction-sections
16:11:40: -fdata-sections -O3 -funroll-loops -fno-pie
16:11:40: Platform: linux2 5.8.0-1-amd64
16:11:40: Bits: 64
16:11:40: Mode: Release
16:11:40: Args: --chdir /fah
16:11:40: Config: /fah/config.xml
16:11:40:******************************** CBang ********************************
16:11:40: Date: Oct 20 2020
16:11:40: Time: 18:37:59
16:11:40: Revision: 7e4ce85225d7eaeb775e87c31740181ca603de60
16:11:40: Branch: master
16:11:40: Compiler: GNU 8.3.0
16:11:40: Options: -faligned-new -std=c++11 -fsigned-char -ffunction-sections
16:11:40: -fdata-sections -O3 -funroll-loops -fno-pie -fPIC
16:11:40: Platform: linux2 5.8.0-1-amd64
16:11:40: Bits: 64
16:11:40: Mode: Release
16:11:40:******************************* System ********************************
16:11:40: CPU: Intel(R) Xeon(R) CPU @ 2.30GHz
16:11:40: CPU ID: GenuineIntel Family 6 Model 63 Stepping 0
16:11:40: CPUs: 2
16:11:40: Memory: 1.74GiB
16:11:40: Free Memory: 876.16MiB
16:11:40: Threads: POSIX_THREADS
16:11:40: OS Version: 5.4
16:11:40: Has Battery: false
16:11:40: On Battery: false
16:11:40: UTC Offset: 0
16:11:40: PID: 1
16:11:40: CWD: /fah
16:11:40: OS: Linux 5.4.0-1032-gcp x86_64
16:11:40: OS Arch: AMD64
16:11:40: GPUs: 1
16:11:40: GPU 0: Bus:0 Slot:4 Func:0 NVIDIA:7 GP100GL [Tesla P100 16GB] 9340
16:11:40: CUDA Device 0: Platform:0 Device:0 Bus:0 Slot:4 Compute:6.0 Driver:11.0
16:11:40:OpenCL Device 0: Platform:0 Device:0 Bus:0 Slot:0 Compute:1.2 Driver:450.80
16:11:40:***********************************************************************
16:11:40:<config>
16:11:40: <!-- Folding Slot Configuration -->
16:11:40: <disable-viz v='true'/>
16:11:40:
16:11:40: <!-- GUI -->
16:11:40: <gui-enabled v='false'/>
16:11:40:
16:11:40: <!-- User Information -->
16:11:40: <passkey v='*****'/>
16:11:40: <team v='**'/>
16:11:40: <user v='**'/>
16:11:40:
16:11:40: <!-- Web Server -->
16:11:40: <web-enable v='false'/>
16:11:40:
16:11:40: <!-- Folding Slots -->
16:11:40: <slot id='0' type='GPU'/>
16:11:40: <slot id='1' type='CPU'>
16:11:40: <cpus v='2'/>
16:11:40: </slot>
16:11:40:</config>
16:11:40:Trying to access database...
16:11:40:Successfully acquired database lock
16:11:40:WARNING:FS00:Guessing ambiguous GPU to OpenCL device mapping for 00: gpu:0:4 GP100GL [Tesla P100 16GB] 9340. Consider upgrading your graphics driver or manually setting ``opencl-index`` in this slot's configuration.
16:11:40:FS00:Set client configured
16:11:40:FS00:Initialized folding slot 00: gpu:0:4 GP100GL [Tesla P100 16GB] 9340
16:11:40:FS01:Initialized folding slot 01: cpu:2
16:11:40:WU00:FS00:Connecting to assign1.foldingathome.org:80
16:11:40:WU01:FS01:Connecting to assign1.foldingathome.org:80
16:11:40:WU01:FS01:Connecting to assign1.foldingathome.org:80
16:11:40:WU00:FS00:Connecting to assign1.foldingathome.org:80
16:11:40:WU01:FS01:Assigned to work server 69.94.66.6
16:11:40:WU01:FS01:Requesting new work unit for slot 01: cpu:2 from 69.94.66.6
16:11:40:WU01:FS01:Connecting to 69.94.66.6:8080
16:11:40:WU00:FS00:Assigned to work server 206.223.170.146
16:11:40:WU00:FS00:Requesting new work unit for slot 00: gpu:0:4 GP100GL [Tesla P100 16GB] 9340 from 206.223.170.146
16:11:40:WU00:FS00:Connecting to 206.223.170.146:8080
16:11:41:WU00:FS00:Downloading 13.78MiB
16:11:41:WU01:FS01:Downloading 2.83MiB
16:11:42:WU00:FS00:Download complete
16:11:42:WU00:FS00:Received Unit: id:00 state:DOWNLOAD error:NO_ERROR project:17427 run:0 clone:1030 gen:114 core:0x22 unit:0x00000095cedfaa920000000000000406
16:11:42:WU00:FS00:Downloading core from http://cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah
16:11:42:WU00:FS00:Connecting to cores.foldingathome.org:80
16:11:42:WU00:FS00:FahCore 22: Downloading 79.02MiB
16:11:43:WU01:FS01:Download complete
16:11:43:WU01:FS01:Received Unit: id:01 state:DOWNLOAD error:NO_ERROR project:14814 run:2135 clone:1 gen:89 core:0xa7 unit:0x00000064455e42060000000008570001
16:11:43:WU01:FS01:Downloading core from http://cores.foldingathome.org/lin/64bit-avx-256/a7-0.0.19/Core_a7.fah
16:11:43:WU01:FS01:Connecting to cores.foldingathome.org:80
16:11:43:WU01:FS01:FahCore a7: Downloading 8.17MiB
16:11:45:WU01:FS01:FahCore a7: Download complete
16:11:45:WU01:FS01:Valid core signature
16:11:45:WU01:FS01:Unpacked 18.52MiB to cores/cores.foldingathome.org/lin/64bit-avx-256/a7-0.0.19/Core_a7.fah/FahCore_a7
16:11:45:WU01:FS01:Starting
16:11:45:WU01:FS01:Running FahCore: /usr/bin/FAHCoreWrapper /fah/cores/cores.foldingathome.org/lin/64bit-avx-256/a7-0.0.19/Core_a7.fah/FahCore_a7 -dir 01 -suffix 01 -version 706 -lifeline 1 -checkpoint 15 -np 2
16:11:45:WU01:FS01:Started FahCore on PID 15
16:11:45:WU01:FS01:Core PID:19
16:11:45:WU01:FS01:FahCore 0xa7 started
16:11:45:WU01:FS01:0xa7:*********************** Log Started 2020-12-14T16:11:45Z ***********************
16:11:45:WU01:FS01:0xa7:************************** Gromacs Folding@home Core ***************************
16:11:45:WU01:FS01:0xa7: Type: 0xa7
16:11:45:WU01:FS01:0xa7: Core: Gromacs
16:11:45:WU01:FS01:0xa7: Args: -dir 01 -suffix 01 -version 706 -lifeline 15 -checkpoint 15 -np 2
16:11:45:WU01:FS01:0xa7:************************************ CBang *************************************
16:11:45:WU01:FS01:0xa7: Date: Nov 27 2019
16:11:45:WU01:FS01:0xa7: Time: 11:26:54
16:11:45:WU01:FS01:0xa7: Revision: d25803215b59272441049dfa05a0a9bf7a6e3c48
16:11:45:WU01:FS01:0xa7: Branch: master
16:11:45:WU01:FS01:0xa7: Compiler: GNU 8.3.0
16:11:45:WU01:FS01:0xa7: Options: -std=c++11 -ffunction-sections -fdata-sections -O3 -funroll-loops
16:11:45:WU01:FS01:0xa7: -fno-pie -fPIC
16:11:45:WU01:FS01:0xa7: Platform: linux2 4.19.0-5-amd64
16:11:45:WU01:FS01:0xa7: Bits: 64
16:11:45:WU01:FS01:0xa7: Mode: Release
16:11:45:WU01:FS01:0xa7:************************************ System ************************************
16:11:45:WU01:FS01:0xa7: CPU: Intel(R) Xeon(R) CPU @ 2.30GHz
16:11:45:WU01:FS01:0xa7: CPU ID: GenuineIntel Family 6 Model 63 Stepping 0
16:11:45:WU01:FS01:0xa7: CPUs: 2
16:11:45:WU01:FS01:0xa7: Memory: 1.74GiB
16:11:45:WU01:FS01:0xa7:Free Memory: 779.97MiB
16:11:45:WU01:FS01:0xa7: Threads: POSIX_THREADS
16:11:45:WU01:FS01:0xa7: OS Version: 5.4
16:11:45:WU01:FS01:0xa7:Has Battery: false
16:11:45:WU01:FS01:0xa7: On Battery: false
16:11:45:WU01:FS01:0xa7: UTC Offset: 0
16:11:45:WU01:FS01:0xa7: PID: 19
16:11:45:WU01:FS01:0xa7: CWD: /fah/work
16:11:45:WU01:FS01:0xa7:******************************** Build - libFAH ********************************
16:11:45:WU01:FS01:0xa7: Version: 0.0.19
16:11:45:WU01:FS01:0xa7: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
16:11:45:WU01:FS01:0xa7: Copyright: 2019 foldingathome.org
16:11:45:WU01:FS01:0xa7: Homepage: https://foldingathome.org/
16:11:45:WU01:FS01:0xa7: Date: Nov 26 2019
16:11:45:WU01:FS01:0xa7: Time: 00:41:42
16:11:45:WU01:FS01:0xa7: Revision: d5b5c747532224f986b7cd02c968ed9a20c16d6e
16:11:45:WU01:FS01:0xa7: Branch: master
16:11:45:WU01:FS01:0xa7: Compiler: GNU 8.3.0
16:11:45:WU01:FS01:0xa7: Options: -std=c++11 -ffunction-sections -fdata-sections -O3 -funroll-loops
16:11:45:WU01:FS01:0xa7: -fno-pie
16:11:45:WU01:FS01:0xa7: Platform: linux2 4.19.0-5-amd64
16:11:45:WU01:FS01:0xa7: Bits: 64
16:11:45:WU01:FS01:0xa7: Mode: Release
16:11:45:WU01:FS01:0xa7:************************************ Build *************************************
16:11:45:WU01:FS01:0xa7: SIMD: avx_256
16:11:45:WU01:FS01:0xa7:********************************************************************************
16:11:45:WU01:FS01:0xa7:Project: 14814 (Run 2135, Clone 1, Gen 89)
16:11:45:WU01:FS01:0xa7:Unit: 0x00000064455e42060000000008570001
16:11:45:WU01:FS01:0xa7:Reading tar file core.xml
16:11:45:WU01:FS01:0xa7:Reading tar file frame89.tpr
16:11:45:WU01:FS01:0xa7:Digital signatures verified
16:11:45:WU01:FS01:0xa7:Calling: mdrun -s frame89.tpr -o frame89.trr -cpt 15 -nt 2
16:11:45:WU01:FS01:0xa7:Steps: first=0 total=250000
16:11:48:WU00:FS00:FahCore 22: 45.48%
16:11:52:WU01:FS01:0xa7:Completed 1 out of 250000 steps (0%)
16:11:54:WU00:FS00:FahCore 22: 91.20%
16:11:55:WU00:FS00:FahCore 22: Download complete
16:11:55:WU00:FS00:Valid core signature
16:11:55:WU00:FS00:Unpacked 5.21MiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/FahCore_22
16:11:55:WU00:FS00:Unpacked 65.05KiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/libOpenMMPME.so
16:11:55:WU00:FS00:Unpacked 2.72MiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/libOpenMMOpenCL.so
16:11:55:WU00:FS00:Unpacked 32.98KiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/libOpenMMCudaCompiler.so
16:11:55:WU00:FS00:Unpacked 2.54MiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/libOpenMMCUDA.so
16:11:55:WU00:FS00:Unpacked 84.05MiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/libcufft.so.9.2
16:11:55:WU00:FS00:Unpacked 570.08KiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/libOpenMMCPU.so
16:11:55:WU00:FS00:Unpacked 3.21MiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/libnvrtc-builtins.so
16:11:55:WU00:FS00:Unpacked 3.22MiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/libOpenMM.so
16:11:55:WU00:FS00:Unpacked 30.73KiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/libfftw3f_threads.so.3
16:11:55:WU00:FS00:Unpacked 1.57MiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/libfftw3f.so.3
16:11:55:WU00:FS00:Unpacked 19.32MiB to cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/libnvrtc.so.9.2
16:11:56:WU00:FS00:Starting
16:11:56:WU00:FS00:Running FahCore: /usr/bin/FAHCoreWrapper /fah/cores/cores.foldingathome.org/lin/64bit/22-0.0.13/Core_22.fah/FahCore_22 -dir 00 -suffix 01 -version 706 -lifeline 1 -checkpoint 15 -opencl-platform 0 -opencl-device 0 -cuda-device 0 -gpu-vendor nvidia -gpu 0 -gpu-usage 100
16:11:56:WU00:FS00:Started FahCore on PID 24
16:11:56:WU00:FS00:Core PID:28
16:11:56:WU00:FS00:FahCore 0x22 started
16:11:56:WU00:FS00:0x22:*********************** Log Started 2020-12-14T16:11:56Z ***********************
16:11:56:WU00:FS00:0x22:*************************** Core22 Folding@home Core ***************************
16:11:56:WU00:FS00:0x22: Core: Core22
16:11:56:WU00:FS00:0x22: Type: 0x22
16:11:56:WU00:FS00:0x22: Version: 0.0.13
16:11:56:WU00:FS00:0x22: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
16:11:56:WU00:FS00:0x22: Copyright: 2020 foldingathome.org
16:11:56:WU00:FS00:0x22: Homepage: https://foldingathome.org/
16:11:56:WU00:FS00:0x22: Date: Sep 19 2020
16:11:56:WU00:FS00:0x22: Time: 01:10:35
16:11:56:WU00:FS00:0x22: Revision: 571cf95de6de2c592c7c3ed48fcfb2e33e9ea7d3
16:11:56:WU00:FS00:0x22: Branch: core22-0.0.13
16:11:56:WU00:FS00:0x22: Compiler: GNU 4.8.2 20140120 (Red Hat 4.8.2-15)
16:11:56:WU00:FS00:0x22: Options: -std=c++11 -fsigned-char -ffunction-sections -fdata-sections -O3
16:11:56:WU00:FS00:0x22: -funroll-loops -DOPENMM_GIT_HASH="\"189320d0\""
16:11:56:WU00:FS00:0x22: Platform: linux2 4.19.76-linuxkit
16:11:56:WU00:FS00:0x22: Bits: 64
16:11:56:WU00:FS00:0x22: Mode: Release
16:11:56:WU00:FS00:0x22:Maintainers: John Chodera <john.chodera@choderalab.org> and Peter Eastman
16:11:56:WU00:FS00:0x22: <peastman@stanford.edu>
16:11:56:WU00:FS00:0x22: Args: -dir 00 -suffix 01 -version 706 -lifeline 24 -checkpoint 15
16:11:56:WU00:FS00:0x22: -opencl-platform 0 -opencl-device 0 -cuda-device 0 -gpu-vendor
16:11:56:WU00:FS00:0x22: nvidia -gpu 0 -gpu-usage 100
16:11:56:WU00:FS00:0x22:************************************ libFAH ************************************
16:11:56:WU00:FS00:0x22: Date: Sep 15 2020
16:11:56:WU00:FS00:0x22: Time: 05:14:43
16:11:56:WU00:FS00:0x22: Revision: 44301ed97b996b63fe736bb8073f22209cb2b603
16:11:56:WU00:FS00:0x22: Branch: HEAD
16:11:56:WU00:FS00:0x22: Compiler: GNU 4.8.2 20140120 (Red Hat 4.8.2-15)
16:11:56:WU00:FS00:0x22: Options: -std=c++11 -fsigned-char -ffunction-sections -fdata-sections -O3
16:11:56:WU00:FS00:0x22: -funroll-loops
16:11:56:WU00:FS00:0x22: Platform: linux2 4.19.76-linuxkit
16:11:56:WU00:FS00:0x22: Bits: 64
16:11:56:WU00:FS00:0x22: Mode: Release
16:11:56:WU00:FS00:0x22:************************************ CBang *************************************
16:11:56:WU00:FS00:0x22: Date: Sep 15 2020
16:11:56:WU00:FS00:0x22: Time: 05:11:04
16:11:56:WU00:FS00:0x22: Revision: 33fcfc2b3ed2195a423606a264718e31e6b3903f
16:11:56:WU00:FS00:0x22: Branch: HEAD
16:11:56:WU00:FS00:0x22: Compiler: GNU 4.8.2 20140120 (Red Hat 4.8.2-15)
16:11:56:WU00:FS00:0x22: Options: -std=c++11 -fsigned-char -ffunction-sections -fdata-sections -O3
16:11:56:WU00:FS00:0x22: -funroll-loops -fPIC
16:11:56:WU00:FS00:0x22: Platform: linux2 4.19.76-linuxkit
16:11:56:WU00:FS00:0x22: Bits: 64
16:11:56:WU00:FS00:0x22: Mode: Release
16:11:56:WU00:FS00:0x22:************************************ System ************************************
16:11:56:WU00:FS00:0x22: CPU: Intel(R) Xeon(R) CPU @ 2.30GHz
16:11:56:WU00:FS00:0x22: CPU ID: GenuineIntel Family 6 Model 63 Stepping 0
16:11:56:WU00:FS00:0x22: CPUs: 2
16:11:56:WU00:FS00:0x22: Memory: 1.74GiB
16:11:56:WU00:FS00:0x22:Free Memory: 617.92MiB
16:11:56:WU00:FS00:0x22: Threads: POSIX_THREADS
16:11:56:WU00:FS00:0x22: OS Version: 5.4
16:11:56:WU00:FS00:0x22:Has Battery: false
16:11:56:WU00:FS00:0x22: On Battery: false
16:11:56:WU00:FS00:0x22: UTC Offset: 0
16:11:56:WU00:FS00:0x22: PID: 28
16:11:56:WU00:FS00:0x22: CWD: /fah/work
16:11:56:WU00:FS00:0x22:************************************ OpenMM ************************************
16:11:56:WU00:FS00:0x22: Revision: 189320d0
16:11:56:WU00:FS00:0x22:********************************************************************************
16:11:56:WU00:FS00:0x22:Project: 17427 (Run 0, Clone 1030, Gen 114)
16:11:56:WU00:FS00:0x22:Unit: 0x00000095cedfaa920000000000000406
16:11:56:WU00:FS00:0x22:Reading tar file core.xml
16:11:56:WU00:FS00:0x22:Reading tar file integrator.xml.bz2
16:11:56:WU00:FS00:0x22:Reading tar file state.xml.bz2
16:11:56:WU00:FS00:0x22:Reading tar file system.xml.bz2
16:11:56:WU00:FS00:0x22:Digital signatures verified
16:11:56:WU00:FS00:0x22:Folding@home GPU Core22 Folding@home Core
16:11:56:WU00:FS00:0x22:Version 0.0.13
16:11:56:WU00:FS00:0x22: Checkpoint write interval: 25000 steps (2%) [50 total]
16:11:56:WU00:FS00:0x22: JSON viewer frame write interval: 12500 steps (1%) [100 total]
16:11:56:WU00:FS00:0x22: XTC frame write interval: 10000 steps (0.8%) [125 total]
16:11:56:WU00:FS00:0x22: Global context and integrator variables write interval: disabled
16:11:56:WU00:FS00:0x22:There are 4 platforms available.
16:11:56:WU00:FS00:0x22:Platform 0: Reference
16:11:56:WU00:FS00:0x22:Platform 1: CPU
16:11:56:WU00:FS00:0x22:Platform 2: OpenCL
16:11:56:WU00:FS00:0x22: opencl-device 0 specified
16:11:56:WU00:FS00:0x22:Platform 3: CUDA
16:11:56:WU00:FS00:0x22: cuda-device 0 specified
16:12:36:WU00:FS00:0x22:Attempting to create CUDA context:
16:12:36:WU00:FS00:0x22: Configuring platform CUDA
16:12:41:Saving configuration to config.xml
16:12:41:<config>
16:12:41: <!-- Folding Slot Configuration -->
16:12:41: <disable-viz v='true'/>
16:12:41:
16:12:41: <!-- GUI -->
16:12:41: <gui-enabled v='false'/>
16:12:41:
16:12:41: <!-- User Information -->
16:12:41: <passkey v='*****'/>
16:12:41: <team v='33'/>
16:12:41: <user v='DonatedFolding'/>
16:12:41:
16:12:41: <!-- Web Server -->
16:12:41: <web-enable v='false'/>
16:12:41:
16:12:41: <!-- Folding Slots -->
16:12:41: <slot id='0' type='GPU'>
16:12:41: <pci-bus v='0'/>
16:12:41: <pci-slot v='4'/>
16:12:41: </slot>
16:12:41: <slot id='1' type='CPU'>
16:12:41: <cpus v='2'/>
16:12:41: </slot>
16:12:41:</config>
16:13:05:WU00:FS00:0x22: Using CUDA and gpu 0