Project: 2665 (Run 0, Clone 50, Gen 6)
Posted: Mon Jun 30, 2008 11:25 am
Just noticed this so posting log, not to worried as it wasted very little time.
Datsun 1600
Datsun 1600
Code: Select all
[09:11:09] Completed 500000 out of 500000 steps (100 percent)
[09:11:09] Writing final coordinates.
[09:11:10] Past main M.D. loop
[09:11:10] Will end MPI now
[09:12:10]
[09:12:10] Finished Work Unit:
[09:12:10] - Reading up to 3727488 from "work/wudata_01.arc": Read 3727488
[09:12:10] - Reading up to 1785388 from "work/wudata_01.xtc": Read 1785388
[09:12:10] goefile size: 0
[09:12:10] logfile size: 17309
[09:12:10] Leaving Run
[09:12:14] - Writing 5534585 bytes of core data to disk...
[09:12:14] ... Done.
[09:12:14] - Failed to delete work/wudata_01.sas
[09:12:14] - Failed to delete work/wudata_01.goe
[09:12:14] Warning: check for stray files
[09:12:14] - Shutting down core
[09:14:14]
[09:14:14] Folding@home Core Shutdown: FINISHED_UNIT
[09:14:14]
[09:14:14] Folding@home Core Shutdown: FINISHED_UNIT
[09:14:18] CoreStatus = 64 (100)
[09:14:18] Sending work to server
[09:14:18] + Attempting to send results
[09:17:29] + Results successfully sent
[09:17:29] Thank you for your contribution to Folding@Home.
[09:17:29] + Number of Units Completed: 236
[09:19:49] - Preparing to get new work unit...
[09:19:49] + Attempting to get work packet
[09:19:49] - Connecting to assignment server
[09:19:49] - Successful: assigned to (171.64.65.64).
[09:19:49] + News From Folding@Home: Welcome to Folding@Home
[09:19:50] Loaded queue successfully.
[09:20:51] + Closed connections
[09:20:51]
[09:20:51] + Processing work unit
[09:20:51] Core required: FahCore_a1.exe
[09:20:51] Core found.
[09:20:51] Working on Unit 02 [June 30 09:20:51]
[09:20:51] + Working ...
[09:20:51]
[09:20:51] *------------------------------*
[09:20:51] Folding@Home Gromacs SMP Core
[09:20:51] Version 1.74 (March 10, 2007)
[09:20:51]
[09:20:51] Preparing to commence simulation
[09:20:51] - Ensuring status. Please wait.
[09:21:08] - Assembly optimizations manually forced on.
[09:21:08] - Not checking prior termination.
[09:21:22] - Expanded 4825542 -> 24426905 (decompressed 506.2 percent)
[09:21:22] - Starting from initial work packet
[09:21:22]
[09:21:22] Project: 2665 (Run 0, Clone 50, Gen 6)
[09:21:22]
[09:21:24] Assembly optimizations on if available.
[09:21:24] Entering M.D.
[09:21:30] Rejecting checkpoint
[09:21:32] NaN detected: x[11415][0]=5.19565 v[11415][0]=NaN
[09:21:32] utdown: BAD_CORE_FILES
[09:21:32] Finalizing output
[09:23:32] ES
[09:23:32]
[09:23:32] Folding@home Core Shutdown: BAD_CORE_FILES
[09:23:32] aN
[09:23:32]
[09:23:32] Folding@home Core Shutdown: BAD_CORE_FILES
[09:23:32] Finalizing output
[09:25:35] CoreStatus = 1 (1)
[09:25:35] Client-core communications error: ERROR 0x1
[09:25:35] Deleting current work unit & continuing...
[09:27:57] - Preparing to get new work unit...
[09:27:57] + Attempting to get work packet
[09:27:57] - Connecting to assignment server
[09:27:58] - Successful: assigned to (171.64.65.64).
[09:27:58] + News From Folding@Home: Welcome to Folding@Home
[09:27:58] Loaded queue successfully.
[09:29:07] + Closed connections
[09:29:12]
[09:29:12] + Processing work unit
[09:29:12] Core required: FahCore_a1.exe
[09:29:12] Core found.
[09:29:12] Working on Unit 03 [June 30 09:29:12]
[09:29:12] + Working ...
[09:29:12]
[09:29:12] *------------------------------*
[09:29:12] Folding@Home Gromacs SMP Core
[09:29:12] Version 1.74 (March 10, 2007)
[09:29:12]
[09:29:12] Preparing to commence simulation
[09:29:12] - Ensuring status. Please wait.
[09:29:29] - Assembly optimizations manually forced on.
[09:29:29] - Not checking prior termination.
[09:29:43] - Expanded 4825542 -> 24426905 (decompressed 506.2 percent)
[09:29:43] - Starting from initial work packet
[09:29:43]
[09:29:43] Project: 2665 (Run 0, Clone 50, Gen 6)
[09:29:43]
[09:29:45] Assembly optimizations on if available.
[09:29:45] Entering M.D.
[09:29:51] Rejecting checkpoint
[09:29:53] NaN detected: x[11415][0]=5.19565 v[11415][0]=NaN
[09:29:53] utdown: BAD_CORE_FILES
[09:29:53] Finalizing output
[09:31:53] ES
[09:31:54]
[09:31:54] Folding@home Core Shutdown: BAD_CORE_FILES
[09:31:54] aN
[09:31:54]
[09:31:54] Folding@home Core Shutdown: BAD_CORE_FILES
[09:31:54] Finalizing output
[09:33:59] CoreStatus = 1 (1)
[09:33:59] Client-core communications error: ERROR 0x1
[09:33:59] Deleting current work unit & continuing...
[09:36:19] - Preparing to get new work unit...
[09:36:19] + Attempting to get work packet
[09:36:19] - Connecting to assignment server
[09:36:22] - Successful: assigned to (171.64.65.64).
[09:36:22] + News From Folding@Home: Welcome to Folding@Home
[09:36:22] Loaded queue successfully.
[09:37:17] + Closed connections
[09:37:22]
[09:37:22] + Processing work unit
[09:37:22] Core required: FahCore_a1.exe
[09:37:22] Core found.
[09:37:22] Working on Unit 04 [June 30 09:37:22]
[09:37:22] + Working ...
[09:37:22]
[09:37:22] *------------------------------*
[09:37:22] Folding@Home Gromacs SMP Core
[09:37:22] Version 1.74 (March 10, 2007)
[09:37:22]
[09:37:22] Preparing to commence simulation
[09:37:22] - Ensuring status. Please wait.
[09:37:39] - Assembly optimizations manually forced on.
[09:37:39] - Not checking prior termination.
[09:37:53] - Expanded 4825542 -> 24426905 (decompressed 506.2 percent)
[09:37:53] - Starting from initial work packet
[09:37:53]
[09:37:53] Project: 2665 (Run 0, Clone 50, Gen 6)
[09:37:53]
[09:37:55] Assembly optimizations on if available.
[09:37:55] Entering M.D.
[09:38:01] Rejecting checkpoint
[09:38:03] NaN detected: x[11415][0]=5.19565 v[11415][0]=NaN
[09:38:03] utdown: BAD_CORE_FILES
[09:38:03] Finalizing output
[09:40:03] ES
[09:40:04]
[09:40:04] Folding@home Core Shutdown: BAD_CORE_FILES
[09:40:04] aN
[09:40:04]
[09:40:04] Folding@home Core Shutdown: BAD_CORE_FILES
[09:40:04] Finalizing output
[09:42:06] CoreStatus = 1 (1)
[09:42:06] Client-core communications error: ERROR 0x1
[09:42:06] - Attempting to download new core...
[09:42:06] + Downloading new core: FahCore_a1.exe
[09:42:07] + 10240 bytes downloaded
[09:42:17] + 789667 bytes downloaded
[09:42:17] Verifying core Core_a1.fah...
[09:42:17] Signature is VALID
[09:42:17]
[09:42:17] Trying to unzip core FahCore_a1.exe
[09:42:18] Decompressed FahCore_a1.exe (2035712 bytes) successfully
[09:42:18] + Core successfully engaged
[09:42:18] Deleting current work unit & continuing...
[09:44:22] - Preparing to get new work unit...
[09:44:22] + Attempting to get work packet
[09:44:22] - Connecting to assignment server
[09:44:24] - Successful: assigned to (171.64.65.64).
[09:44:24] + News From Folding@Home: Welcome to Folding@Home
[09:44:24] Loaded queue successfully.
[09:44:27] - Error: Attempt #1 to get work failed, and no other work to do.
Waiting before retry.
[09:44:35] + Attempting to get work packet
[09:44:35] - Connecting to assignment server
[09:44:39] - Successful: assigned to (171.64.65.64).
[09:44:39] + News From Folding@Home: Welcome to Folding@Home
[09:44:39] Loaded queue successfully.
[09:49:03] + Closed connections
[09:49:08]
[09:49:08] + Processing work unit
[09:49:08] Core required: FahCore_a1.exe
[09:49:08] Core found.
[09:49:08] Working on Unit 05 [June 30 09:49:08]
[09:49:08] + Working ...
[09:49:09]
[09:49:09] *------------------------------*
[09:49:09] Folding@Home Gromacs SMP Core
[09:49:09] Version 1.74 (March 10, 2007)
[09:49:09]
[09:49:09] Preparing to commence simulation
[09:49:09] - Ensuring status. Please wait.
[09:49:26] - Assembly optimizations manually forced on.
[09:49:26] - Not checking prior termination.
[09:49:37] - Expanded 4734885 -> 24426905 (decompressed 515.8 percent)
[09:49:38] - Starting from initial work packet
[09:49:38]
[09:49:38] Project: 2665 (Run 0, Clone 495, Gen 22)
[09:49:38]
[09:49:41] Assembly optimizations on if available.
[09:49:41] Entering M.D.
[09:49:48] Rejecting checkpoint
[09:49:49] Protein: HGG in water
[09:49:49] Writing local files
[09:49:56] Extra SSE boost OK.
[09:49:56] Writing local files
[09:49:57] Completed 0 out of 250000 steps (0 percent)
[10:06:03] Writing local files
[10:06:04] Completed 2500 out of 250000 steps (1 percent)
[10:22:11] Writing local files
[10:22:12] Completed 5000 out of 250000 steps (2 percent)
[10:38:18] Writing local files
[10:38:19] Completed 7500 out of 250000 steps (3 percent)
[10:54:26] Writing local files
[10:54:26] Completed 10000 out of 250000 steps (4 percent)
[11:10:34] Writing local files
[11:10:35] Completed 12500 out of 250000 steps (5 percent)