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Poor Quadro Performance
Posted: Tue Jan 28, 2020 4:27 am
by ColonelRyzen
I am running an UnRAID server with the FAH docker installed. The system is a Threadripper 1920X w/ 32GB RAM and Quadro K4000(GK104), GT 730(GK208) and Quadro K2000(GK107) GPUs. I have 8C/16T dedicated to the docker. 13T are CPU slots and the other 3 are reserved for the 3 GPUs. The performance overall has been pretty bad, but the GPUs are the worst. The K4000 is getting 17.5K PPD, the GT 730 is getting 14K PPD and the K2000 is getting 31K PPD. Those numbers make no sense because the K4000 should be the highest performer there. Has anyone seen poor performance like this on UnRAID?
Note: I do have a key entered and it works fine.
Re: Poor Quadro Performance
Posted: Tue Jan 28, 2020 12:20 pm
by foldy
Can you post your FAH logfile?
Re: Poor Quadro Performance
Posted: Tue Jan 28, 2020 2:04 pm
by JimboPalmer
I have not seen the log, but I am betting the client software has simply confused the K4000 and K2000 for each other. It is prone to do that. If you paused one card and looks at which one quieted, you could confirm that.
Re: Poor Quadro Performance
Posted: Tue Jan 28, 2020 4:40 pm
by Nathan_P
You're staving the gpu's of threads. Try stopping the cpu threads completely and seeing what you get. A K4000 is similar to a GTX 670/770 which from memory gets around 60k.
Re: Poor Quadro Performance
Posted: Wed Jan 29, 2020 12:14 pm
by ColonelRyzen
Here are the most recent logs.
Code: Select all
*********************** Log Started 2020-01-28T12:17:54Z ***********************
12:17:54:************************* Folding@home Client *************************
12:17:54: Website: http://folding.stanford.edu/
12:17:54: Copyright: (c) 2009-2014 Stanford University
12:17:54: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
12:17:54: Args: --config /config/config.xml
12:17:54: Config: /config/config.xml
12:17:54:******************************** Build ********************************
12:17:54: Version: 7.4.4
12:17:54: Date: Mar 4 2014
12:17:54: Time: 12:02:38
12:17:54: SVN Rev: 4130
12:17:54: Branch: fah/trunk/client
12:17:54: Compiler: GNU 4.4.7
12:17:54: Options: -std=gnu++98 -O3 -funroll-loops -mfpmath=sse -ffast-math
12:17:54: -fno-unsafe-math-optimizations -msse2
12:17:54: Platform: linux2 3.2.0-1-amd64
12:17:54: Bits: 64
12:17:54: Mode: Release
12:17:54:******************************* System ********************************
12:17:54: CPU: AMD Ryzen Threadripper 1920X 12-Core Processor
12:17:54: CPU ID: AuthenticAMD Family 23 Model 1 Stepping 1
12:17:54: CPUs: 24
12:17:54: Memory: 31.35GiB
12:17:54:Free Memory: 280.42MiB
12:17:54: Threads: POSIX_THREADS
12:17:54: OS Version: 4.19
12:17:54:Has Battery: false
12:17:54: On Battery: false
12:17:54: UTC Offset: 0
12:17:54: PID: 30
12:17:54: CWD: /config
12:17:54: OS: Linux 4.19.94-Unraid x86_64
12:17:54: OS Arch: AMD64
12:17:54: GPUs: 3
12:17:54: GPU 0: NVIDIA:3 GK107 [Quadro K2000]
12:17:54: GPU 1: NVIDIA:3 GK208 [GeForce GT 730]
12:17:54: GPU 2: NVIDIA:3 GK104 [Quadro K4000]
12:17:54: CUDA: 3.0
12:17:54:CUDA Driver: 10020
12:17:54:***********************************************************************
12:17:54:<config>
12:17:54: <!-- HTTP Server -->
12:17:54: <allow v='10.10.0.1/24'/>
12:17:54:
12:17:54: <!-- Network -->
12:17:54: <proxy v=':8080'/>
12:17:54:
12:17:54: <!-- Remote Command Server -->
12:17:54: <password v='********'/>
12:17:54:
12:17:54: <!-- Slot Control -->
12:17:54: <power v='MEDIUM'/>
12:17:54:
12:17:54: <!-- User Information -->
12:17:54: <passkey v='********************************'/>
12:17:54: <team v='223518'/>
12:17:54: <user v='ColonelRyzen'/>
12:17:54:
12:17:54: <!-- Web Server -->
12:17:54: <web-allow v='10.10.0.1/24'/>
12:17:54:
12:17:54: <!-- Folding Slots -->
12:17:54: <slot id='0' type='CPU'>
12:17:54: <cpus v='13'/>
12:17:54: </slot>
12:17:54: <slot id='1' type='GPU'>
12:17:54: <gpu-index v='2'/>
12:17:54: </slot>
12:17:54: <slot id='2' type='GPU'>
12:17:54: <gpu-index v='1'/>
12:17:54: </slot>
12:17:54: <slot id='3' type='GPU'>
12:17:54: <gpu-index v='0'/>
12:17:54: </slot>
12:17:54:</config>
12:17:54:Trying to access database...
12:17:54:Successfully acquired database lock
12:17:54:Enabled folding slot 00: READY cpu:13
12:17:54:Enabled folding slot 01: READY gpu:2:GK104 [Quadro K4000]
12:17:54:Enabled folding slot 02: READY gpu:1:GK208 [GeForce GT 730]
12:17:54:Enabled folding slot 03: READY gpu:0:GK107 [Quadro K2000]
12:17:54:WU00:FS00:Starting
[93m12:17:54:WARNING:WU00:FS00:Changed SMP threads from 15 to 13 this can cause some work units to fail[0m
12:17:54:WU00:FS00:Running FahCore: /opt/fah/usr/bin/FAHCoreWrapper /config/cores/cores.foldingathome.org/v7/lin/64bit/avx/Core_a7.fah/FahCore_a7 -dir 00 -suffix 01 -version 704 -lifeline 30 -checkpoint 15 -np 13
12:17:54:WU00:FS00:Started FahCore on PID 40
12:17:54:WU00:FS00:Core PID:44
12:17:54:WU00:FS00:FahCore 0xa7 started
12:17:54:WU03:FS03:Starting
12:17:54:WU03:FS03:Running FahCore: /opt/fah/usr/bin/FAHCoreWrapper /config/cores/cores.foldingathome.org/v7/lin/64bit/Core_21.fah/FahCore_21 -dir 03 -suffix 01 -version 704 -lifeline 30 -checkpoint 15 -gpu 0 -gpu-vendor nvidia
12:17:54:WU03:FS03:Started FahCore on PID 48
12:17:54:WU03:FS03:Core PID:52
12:17:54:WU03:FS03:FahCore 0x21 started
12:17:54:WU01:FS01:Starting
12:17:54:WU01:FS01:Running FahCore: /opt/fah/usr/bin/FAHCoreWrapper /config/cores/cores.foldingathome.org/v7/lin/64bit/Core_21.fah/FahCore_21 -dir 01 -suffix 01 -version 704 -lifeline 30 -checkpoint 15 -gpu 2 -gpu-vendor nvidia
12:17:54:WU01:FS01:Started FahCore on PID 55
12:17:54:WU01:FS01:Core PID:59
12:17:54:WU01:FS01:FahCore 0x21 started
12:17:54:WU02:FS02:Starting
12:17:54:WU02:FS02:Running FahCore: /opt/fah/usr/bin/FAHCoreWrapper /config/cores/cores.foldingathome.org/v7/lin/64bit/Core_21.fah/FahCore_21 -dir 02 -suffix 01 -version 704 -lifeline 30 -checkpoint 15 -gpu 1 -gpu-vendor nvidia
12:17:54:WU02:FS02:Started FahCore on PID 62
12:17:54:WU02:FS02:Core PID:66
12:17:54:WU02:FS02:FahCore 0x21 started
12:17:54:WU00:FS00:0xa7:*********************** Log Started 2020-01-28T12:17:54Z ***********************
12:17:54:WU00:FS00:0xa7:************************** Gromacs Folding@home Core ***************************
12:17:54:WU00:FS00:0xa7: Type: 0xa7
12:17:54:WU00:FS00:0xa7: Core: Gromacs
12:17:54:WU00:FS00:0xa7: Args: -dir 00 -suffix 01 -version 704 -lifeline 40 -checkpoint 15 -np 13
12:17:54:WU00:FS00:0xa7:************************************ CBang *************************************
12:17:54:WU00:FS00:0xa7: Date: Nov 5 2019
12:17:54:WU00:FS00:0xa7: Time: 06:06:57
12:17:54:WU00:FS00:0xa7: Revision: 46c96f1aa8419571d83f3e63f9c99a0d602f6da9
12:17:54:WU00:FS00:0xa7: Branch: master
12:17:54:WU00:FS00:0xa7: Compiler: GNU 8.3.0
12:17:54:WU00:FS00:0xa7: Options: -std=c++11 -O3 -funroll-loops -fno-pie -fPIC
12:17:54:WU00:FS00:0xa7: Platform: linux2 4.19.0-5-amd64
12:17:54:WU00:FS00:0xa7: Bits: 64
12:17:54:WU00:FS00:0xa7: Mode: Release
12:17:54:WU00:FS00:0xa7:************************************ System ************************************
12:17:54:WU00:FS00:0xa7: CPU: AMD Ryzen Threadripper 1920X 12-Core Processor
12:17:54:WU00:FS00:0xa7: CPU ID: AuthenticAMD Family 23 Model 1 Stepping 1
12:17:54:WU00:FS00:0xa7: CPUs: 24
12:17:54:WU00:FS00:0xa7: Memory: 31.35GiB
12:17:54:WU00:FS00:0xa7:Free Memory: 247.32MiB
12:17:54:WU00:FS00:0xa7: Threads: POSIX_THREADS
12:17:54:WU00:FS00:0xa7: OS Version: 4.19
12:17:54:WU00:FS00:0xa7:Has Battery: false
12:17:54:WU00:FS00:0xa7: On Battery: false
12:17:54:WU00:FS00:0xa7: UTC Offset: 0
12:17:54:WU00:FS00:0xa7: PID: 44
12:17:54:WU00:FS00:0xa7: CWD: /config/work
12:17:54:WU00:FS00:0xa7:******************************** Build - libFAH ********************************
12:17:54:WU00:FS00:0xa7: Version: 0.0.18
12:17:54:WU00:FS00:0xa7: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
12:17:54:WU00:FS00:0xa7: Copyright: 2019 foldingathome.org
12:17:54:WU00:FS00:0xa7: Homepage: https://foldingathome.org/
12:17:54:WU00:FS00:0xa7: Date: Nov 5 2019
12:17:54:WU00:FS00:0xa7: Time: 06:13:26
12:17:54:WU00:FS00:0xa7: Revision: 490c9aa2957b725af319379424d5c5cb36efb656
12:17:54:WU00:FS00:0xa7: Branch: master
12:17:54:WU00:FS00:0xa7: Compiler: GNU 8.3.0
12:17:54:WU00:FS00:0xa7: Options: -std=c++11 -O3 -funroll-loops -fno-pie
12:17:54:WU00:FS00:0xa7: Platform: linux2 4.19.0-5-amd64
12:17:54:WU00:FS00:0xa7: Bits: 64
12:17:54:WU00:FS00:0xa7: Mode: Release
12:17:54:WU00:FS00:0xa7:************************************ Build *************************************
12:17:54:WU00:FS00:0xa7: SIMD: avx_256
12:17:54:WU00:FS00:0xa7:********************************************************************************
12:17:54:WU00:FS00:0xa7:Project: 14400 (Run 0, Clone 3710, Gen 48)
12:17:54:WU00:FS00:0xa7:Unit: 0x0000003780fccb095dcad76b33b13c34
12:17:54:WU00:FS00:0xa7:Digital signatures verified
12:17:54:WU00:FS00:0xa7:Reducing thread count from 13 to 12 to avoid domain decomposition by a prime number > 3
12:17:54:WU00:FS00:0xa7:Calling: mdrun -s frame48.tpr -o frame48.trr -x frame48.xtc -cpi state.cpt -cpt 15 -nt 12
12:17:54:WU00:FS00:0xa7:Steps: first=6000000 total=125000
12:17:55:WU03:FS03:0x21:*********************** Log Started 2020-01-28T12:17:54Z ***********************
12:17:55:WU03:FS03:0x21:Project: 14320 (Run 372, Clone 6, Gen 25)
12:17:55:WU03:FS03:0x21:Unit: 0x000000250002894c5dfebaf546273ad5
12:17:55:WU03:FS03:0x21:CPU: 0x00000000000000000000000000000000
12:17:55:WU03:FS03:0x21:Machine: 3
12:17:55:WU03:FS03:0x21:Digital signatures verified
12:17:55:WU03:FS03:0x21:Folding@home GPU Core21 Folding@home Core
12:17:55:WU03:FS03:0x21:Version 0.0.20
12:17:55:WU01:FS01:0x21:*********************** Log Started 2020-01-28T12:17:54Z ***********************
12:17:55:WU01:FS01:0x21:Project: 11714 (Run 0, Clone 12823, Gen 70)
12:17:55:WU01:FS01:0x21:Unit: 0x000000738ca304f15de0497d0fe55ec4
12:17:55:WU01:FS01:0x21:CPU: 0x00000000000000000000000000000000
12:17:55:WU01:FS01:0x21:Machine: 1
12:17:55:WU01:FS01:0x21:Digital signatures verified
12:17:55:WU01:FS01:0x21:Folding@home GPU Core21 Folding@home Core
12:17:55:WU01:FS01:0x21:Version 0.0.20
12:17:55:WU02:FS02:0x21:*********************** Log Started 2020-01-28T12:17:54Z ***********************
12:17:55:WU02:FS02:0x21:Project: 14196 (Run 14, Clone 94, Gen 205)
12:17:55:WU02:FS02:0x21:Unit: 0x000001320002894b5d92468b2ea51f1f
12:17:55:WU02:FS02:0x21:CPU: 0x00000000000000000000000000000000
12:17:55:WU02:FS02:0x21:Machine: 2
12:17:55:WU02:FS02:0x21:Digital signatures verified
12:17:55:WU02:FS02:0x21:Folding@home GPU Core21 Folding@home Core
12:17:55:WU02:FS02:0x21:Version 0.0.20
12:17:55:10:10.10.0.230:New Web connection
12:17:55:WU03:FS03:0x21:Completed 0 out of 25000000 steps (0%)
12:17:55:WU03:FS03:0x21:Temperature control disabled. Requirements: single Nvidia GPU, tmax must be < 110 and twait >= 900
12:17:56:WU00:FS00:0xa7:Completed 1232 out of 125000 steps (0%)
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12:17:58:WU01:FS01:0x21:Completed 0 out of 7500000 steps (0%)
12:17:58:WU01:FS01:0x21:Temperature control disabled. Requirements: single Nvidia GPU, tmax must be < 110 and twait >= 900
12:18:01:WU02:FS02:0x21:Completed 0 out of 5000000 steps (0%)
12:18:01:WU02:FS02:0x21:Temperature control disabled. Requirements: single Nvidia GPU, tmax must be < 110 and twait >= 900
12:18:53:WU00:FS00:0xa7:Completed 2500 out of 125000 steps (2%)
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13:47:18:WU00:FS00:0xa7:Completed 120000 out of 125000 steps (96%)
13:48:16:WU00:FS00:0xa7:Completed 121250 out of 125000 steps (97%)
13:49:13:WU00:FS00:0xa7:Completed 122500 out of 125000 steps (98%)
13:50:08:WU00:FS00:0xa7:Completed 123750 out of 125000 steps (99%)
13:50:09:WU04:FS00:Connecting to 65.254.110.245:8080
13:50:09:WU04:FS00:Assigned to work server 155.247.166.219
13:50:09:WU04:FS00:Requesting new work unit for slot 00: RUNNING cpu:13 from 155.247.166.219
13:50:09:WU04:FS00:Connecting to 155.247.166.219:8080
13:50:09:WU04:FS00:Downloading 15.62MiB
13:50:13:WU04:FS00:Download complete
13:50:13:WU04:FS00:Received Unit: id:04 state:DOWNLOAD error:NO_ERROR project:14175 run:0 clone:222 gen:118 core:0xa7 unit:0x000000940002894b5cabee5a6648ecce
13:51:04:WU00:FS00:0xa7:Completed 125000 out of 125000 steps (100%)
13:51:09:WU00:FS00:0xa7:Saving result file ../logfile_01.txt
13:51:09:WU00:FS00:0xa7:Saving result file frame48.trr
13:51:09:WU00:FS00:0xa7:Saving result file frame48.xtc
13:51:09:WU00:FS00:0xa7:Saving result file md.log
13:51:09:WU00:FS00:0xa7:Saving result file science.log
13:51:09:WU00:FS00:0xa7:Folding@home Core Shutdown: FINISHED_UNIT
13:51:09:WU00:FS00:FahCore returned: FINISHED_UNIT (100 = 0x64)
13:51:09:WU00:FS00:Sending unit results: id:00 state:SEND error:NO_ERROR project:14400 run:0 clone:3710 gen:48 core:0xa7 unit:0x0000003780fccb095dcad76b33b13c34
13:51:09:WU00:FS00:Uploading 9.83MiB to 128.252.203.9
13:51:09:WU00:FS00:Connecting to 128.252.203.9:8080
13:51:09:WU04:FS00:Starting
13:51:09:WU04:FS00:Running FahCore: /opt/fah/usr/bin/FAHCoreWrapper /config/cores/cores.foldingathome.org/v7/lin/64bit/avx/Core_a7.fah/FahCore_a7 -dir 04 -suffix 01 -version 704 -lifeline 30 -checkpoint 15 -np 13
13:51:09:WU04:FS00:Started FahCore on PID 184
13:51:09:WU04:FS00:Core PID:188
13:51:09:WU04:FS00:FahCore 0xa7 started
13:51:10:WU04:FS00:0xa7:*********************** Log Started 2020-01-28T13:51:09Z ***********************
13:51:10:WU04:FS00:0xa7:************************** Gromacs Folding@home Core ***************************
13:51:10:WU04:FS00:0xa7: Type: 0xa7
13:51:10:WU04:FS00:0xa7: Core: Gromacs
13:51:10:WU04:FS00:0xa7: Args: -dir 04 -suffix 01 -version 704 -lifeline 184 -checkpoint 15 -np 13
13:51:10:WU04:FS00:0xa7:************************************ CBang *************************************
13:51:10:WU04:FS00:0xa7: Date: Nov 5 2019
13:51:10:WU04:FS00:0xa7: Time: 06:06:57
13:51:10:WU04:FS00:0xa7: Revision: 46c96f1aa8419571d83f3e63f9c99a0d602f6da9
13:51:10:WU04:FS00:0xa7: Branch: master
13:51:10:WU04:FS00:0xa7: Compiler: GNU 8.3.0
13:51:10:WU04:FS00:0xa7: Options: -std=c++11 -O3 -funroll-loops -fno-pie -fPIC
13:51:10:WU04:FS00:0xa7: Platform: linux2 4.19.0-5-amd64
13:51:10:WU04:FS00:0xa7: Bits: 64
13:51:10:WU04:FS00:0xa7: Mode: Release
13:51:10:WU04:FS00:0xa7:************************************ System ************************************
13:51:10:WU04:FS00:0xa7: CPU: AMD Ryzen Threadripper 1920X 12-Core Processor
13:51:10:WU04:FS00:0xa7: CPU ID: AuthenticAMD Family 23 Model 1 Stepping 1
13:51:10:WU04:FS00:0xa7: CPUs: 24
13:51:10:WU04:FS00:0xa7: Memory: 31.35GiB
13:51:10:WU04:FS00:0xa7:Free Memory: 707.58MiB
13:51:10:WU04:FS00:0xa7: Threads: POSIX_THREADS
13:51:10:WU04:FS00:0xa7: OS Version: 4.19
13:51:10:WU04:FS00:0xa7:Has Battery: false
13:51:10:WU04:FS00:0xa7: On Battery: false
13:51:10:WU04:FS00:0xa7: UTC Offset: 0
13:51:10:WU04:FS00:0xa7: PID: 188
13:51:10:WU04:FS00:0xa7: CWD: /config/work
13:51:10:WU04:FS00:0xa7:******************************** Build - libFAH ********************************
13:51:10:WU04:FS00:0xa7: Version: 0.0.18
13:51:10:WU04:FS00:0xa7: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
13:51:10:WU04:FS00:0xa7: Copyright: 2019 foldingathome.org
13:51:10:WU04:FS00:0xa7: Homepage: https://foldingathome.org/
13:51:10:WU04:FS00:0xa7: Date: Nov 5 2019
13:51:10:WU04:FS00:0xa7: Time: 06:13:26
13:51:10:WU04:FS00:0xa7: Revision: 490c9aa2957b725af319379424d5c5cb36efb656
13:51:10:WU04:FS00:0xa7: Branch: master
13:51:10:WU04:FS00:0xa7: Compiler: GNU 8.3.0
13:51:10:WU04:FS00:0xa7: Options: -std=c++11 -O3 -funroll-loops -fno-pie
13:51:10:WU04:FS00:0xa7: Platform: linux2 4.19.0-5-amd64
13:51:10:WU04:FS00:0xa7: Bits: 64
13:51:10:WU04:FS00:0xa7: Mode: Release
13:51:10:WU04:FS00:0xa7:************************************ Build *************************************
13:51:10:WU04:FS00:0xa7: SIMD: avx_256
13:51:10:WU04:FS00:0xa7:********************************************************************************
13:51:10:WU04:FS00:0xa7:Project: 14175 (Run 0, Clone 222, Gen 118)
13:51:10:WU04:FS00:0xa7:Unit: 0x000000940002894b5cabee5a6648ecce
13:51:10:WU04:FS00:0xa7:Reading tar file core.xml
13:51:10:WU04:FS00:0xa7:Reading tar file frame118.tpr
13:51:10:WU04:FS00:0xa7:Digital signatures verified
13:51:10:WU04:FS00:0xa7:Reducing thread count from 13 to 12 to avoid domain decomposition by a prime number > 3
13:51:10:WU04:FS00:0xa7:Calling: mdrun -s frame118.tpr -o frame118.trr -cpt 15 -nt 12
13:51:10:WU04:FS00:0xa7:Steps: first=29500000 total=250000
13:51:15:WU00:FS00:Upload 74.42%
13:51:16:WU04:FS00:0xa7:Completed 1 out of 250000 steps (0%)
13:51:17:WU00:FS00:Upload complete
13:51:17:WU00:FS00:Server responded WORK_ACK (400)
13:51:17:WU00:FS00:Final credit estimate, 6237.00 points
13:51:17:WU00:FS00:Cleaning up
[91m13:51:17:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
13:51:17:WU00:FS00:Cleaning up
[91m13:51:17:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
13:52:17:WU00:FS00:Cleaning up
[91m13:52:17:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
13:53:54:WU00:FS00:Cleaning up
[91m13:53:54:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
13:54:57:WU04:FS00:0xa7:Completed 2500 out of 250000 steps (1%)
13:56:32:WU00:FS00:Cleaning up
[91m13:56:32:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
13:58:37:WU04:FS00:0xa7:Completed 5000 out of 250000 steps (2%)
14:00:46:WU00:FS00:Cleaning up
[91m14:00:46:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
14:02:17:WU04:FS00:0xa7:Completed 7500 out of 250000 steps (3%)
14:02:24:WU03:FS03:0x21:Completed 1000000 out of 25000000 steps (4%)
14:05:59:WU04:FS00:0xa7:Completed 10000 out of 250000 steps (4%)
14:07:38:WU00:FS00:Cleaning up
[91m14:07:38:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
14:09:43:WU04:FS00:0xa7:Completed 12500 out of 250000 steps (5%)
14:10:55:WU02:FS02:0x21:Completed 150000 out of 5000000 steps (3%)
14:13:27:WU04:FS00:0xa7:Completed 15000 out of 250000 steps (6%)
14:16:33:WU01:FS01:0x21:Completed 300000 out of 7500000 steps (4%)
14:17:09:WU04:FS00:0xa7:Completed 17500 out of 250000 steps (7%)
14:18:43:WU00:FS00:Cleaning up
[91m14:18:43:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
14:20:54:WU04:FS00:0xa7:Completed 20000 out of 250000 steps (8%)
14:24:42:WU04:FS00:0xa7:Completed 22500 out of 250000 steps (9%)
14:28:27:WU04:FS00:0xa7:Completed 25000 out of 250000 steps (10%)
14:28:32:WU03:FS03:0x21:Completed 1250000 out of 25000000 steps (5%)
14:32:10:WU04:FS00:0xa7:Completed 27500 out of 250000 steps (11%)
14:35:54:WU04:FS00:0xa7:Completed 30000 out of 250000 steps (12%)
14:36:40:WU00:FS00:Cleaning up
[91m14:36:40:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
14:39:37:WU04:FS00:0xa7:Completed 32500 out of 250000 steps (13%)
14:43:23:WU04:FS00:0xa7:Completed 35000 out of 250000 steps (14%)
14:46:14:WU01:FS01:0x21:Completed 375000 out of 7500000 steps (5%)
14:47:06:WU04:FS00:0xa7:Completed 37500 out of 250000 steps (15%)
14:48:36:WU02:FS02:0x21:Completed 200000 out of 5000000 steps (4%)
14:50:47:WU04:FS00:0xa7:Completed 40000 out of 250000 steps (16%)
14:54:34:WU04:FS00:0xa7:Completed 42500 out of 250000 steps (17%)
14:54:39:WU03:FS03:0x21:Completed 1500000 out of 25000000 steps (6%)
14:58:19:WU04:FS00:0xa7:Completed 45000 out of 250000 steps (18%)
15:02:05:WU04:FS00:0xa7:Completed 47500 out of 250000 steps (19%)
15:05:42:WU00:FS00:Cleaning up
[91m15:05:42:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
15:05:50:WU04:FS00:0xa7:Completed 50000 out of 250000 steps (20%)
15:09:37:WU04:FS00:0xa7:Completed 52500 out of 250000 steps (21%)
15:13:23:WU04:FS00:0xa7:Completed 55000 out of 250000 steps (22%)
15:15:55:WU01:FS01:0x21:Completed 450000 out of 7500000 steps (6%)
15:17:05:WU04:FS00:0xa7:Completed 57500 out of 250000 steps (23%)
15:20:47:WU03:FS03:0x21:Completed 1750000 out of 25000000 steps (7%)
15:20:48:WU04:FS00:0xa7:Completed 60000 out of 250000 steps (24%)
15:24:37:WU04:FS00:0xa7:Completed 62500 out of 250000 steps (25%)
15:26:14:WU02:FS02:0x21:Completed 250000 out of 5000000 steps (5%)
15:28:20:WU04:FS00:0xa7:Completed 65000 out of 250000 steps (26%)
15:32:07:WU04:FS00:0xa7:Completed 67500 out of 250000 steps (27%)
15:35:54:WU04:FS00:0xa7:Completed 70000 out of 250000 steps (28%)
15:39:41:WU04:FS00:0xa7:Completed 72500 out of 250000 steps (29%)
15:43:29:WU04:FS00:0xa7:Completed 75000 out of 250000 steps (30%)
15:45:36:WU01:FS01:0x21:Completed 525000 out of 7500000 steps (7%)
15:46:54:WU03:FS03:0x21:Completed 2000000 out of 25000000 steps (8%)
15:47:13:WU04:FS00:0xa7:Completed 77500 out of 250000 steps (31%)
15:50:56:WU04:FS00:0xa7:Completed 80000 out of 250000 steps (32%)
15:52:41:WU00:FS00:Cleaning up
[91m15:52:41:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
15:54:43:WU04:FS00:0xa7:Completed 82500 out of 250000 steps (33%)
15:58:26:WU04:FS00:0xa7:Completed 85000 out of 250000 steps (34%)
16:02:10:WU04:FS00:0xa7:Completed 87500 out of 250000 steps (35%)
16:03:56:WU02:FS02:0x21:Completed 300000 out of 5000000 steps (6%)
16:05:53:WU04:FS00:0xa7:Completed 90000 out of 250000 steps (36%)
16:09:43:WU04:FS00:0xa7:Completed 92500 out of 250000 steps (37%)
16:13:01:WU03:FS03:0x21:Completed 2250000 out of 25000000 steps (9%)
16:13:26:WU04:FS00:0xa7:Completed 95000 out of 250000 steps (38%)
16:15:16:WU01:FS01:0x21:Completed 600000 out of 7500000 steps (8%)
16:17:08:WU04:FS00:0xa7:Completed 97500 out of 250000 steps (39%)
16:20:50:WU04:FS00:0xa7:Completed 100000 out of 250000 steps (40%)
16:24:39:WU04:FS00:0xa7:Completed 102500 out of 250000 steps (41%)
16:28:24:WU04:FS00:0xa7:Completed 105000 out of 250000 steps (42%)
16:32:10:WU04:FS00:0xa7:Completed 107500 out of 250000 steps (43%)
16:35:54:WU04:FS00:0xa7:Completed 110000 out of 250000 steps (44%)
16:39:09:WU03:FS03:0x21:Completed 2500000 out of 25000000 steps (10%)
16:39:41:WU04:FS00:0xa7:Completed 112500 out of 250000 steps (45%)
16:41:36:WU02:FS02:0x21:Completed 350000 out of 5000000 steps (7%)
16:43:26:WU04:FS00:0xa7:Completed 115000 out of 250000 steps (46%)
16:44:57:WU01:FS01:0x21:Completed 675000 out of 7500000 steps (9%)
16:47:12:WU04:FS00:0xa7:Completed 117500 out of 250000 steps (47%)
16:50:56:WU04:FS00:0xa7:Completed 120000 out of 250000 steps (48%)
16:54:47:WU04:FS00:0xa7:Completed 122500 out of 250000 steps (49%)
16:58:32:WU04:FS00:0xa7:Completed 125000 out of 250000 steps (50%)
17:02:18:WU04:FS00:0xa7:Completed 127500 out of 250000 steps (51%)
17:05:11:WU03:FS03:0x21:Completed 2750000 out of 25000000 steps (11%)
17:06:01:WU04:FS00:0xa7:Completed 130000 out of 250000 steps (52%)
17:08:42:WU00:FS00:Cleaning up
[91m17:08:42:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
17:09:49:WU04:FS00:0xa7:Completed 132500 out of 250000 steps (53%)
17:13:35:WU04:FS00:0xa7:Completed 135000 out of 250000 steps (54%)
17:14:38:WU01:FS01:0x21:Completed 750000 out of 7500000 steps (10%)
17:17:17:WU04:FS00:0xa7:Completed 137500 out of 250000 steps (55%)
17:19:14:WU02:FS02:0x21:Completed 400000 out of 5000000 steps (8%)
17:21:04:WU04:FS00:0xa7:Completed 140000 out of 250000 steps (56%)
17:24:51:WU04:FS00:0xa7:Completed 142500 out of 250000 steps (57%)
17:28:36:WU04:FS00:0xa7:Completed 145000 out of 250000 steps (58%)
17:31:19:WU03:FS03:0x21:Completed 3000000 out of 25000000 steps (12%)
17:32:21:WU04:FS00:0xa7:Completed 147500 out of 250000 steps (59%)
17:36:09:WU04:FS00:0xa7:Completed 150000 out of 250000 steps (60%)
17:40:02:WU04:FS00:0xa7:Completed 152500 out of 250000 steps (61%)
17:43:47:WU04:FS00:0xa7:Completed 155000 out of 250000 steps (62%)
17:44:21:WU01:FS01:0x21:Completed 825000 out of 7500000 steps (11%)
17:47:31:WU04:FS00:0xa7:Completed 157500 out of 250000 steps (63%)
17:51:22:WU04:FS00:0xa7:Completed 160000 out of 250000 steps (64%)
17:55:03:WU04:FS00:0xa7:Completed 162500 out of 250000 steps (65%)
17:56:54:WU02:FS02:0x21:Completed 450000 out of 5000000 steps (9%)
17:57:28:WU03:FS03:0x21:Completed 3250000 out of 25000000 steps (13%)
17:58:46:WU04:FS00:0xa7:Completed 165000 out of 250000 steps (66%)
18:02:30:WU04:FS00:0xa7:Completed 167500 out of 250000 steps (67%)
18:06:19:WU04:FS00:0xa7:Completed 170000 out of 250000 steps (68%)
18:10:04:WU04:FS00:0xa7:Completed 172500 out of 250000 steps (69%)
18:13:49:WU04:FS00:0xa7:Completed 175000 out of 250000 steps (70%)
18:14:02:WU01:FS01:0x21:Completed 900000 out of 7500000 steps (12%)
18:17:38:WU04:FS00:0xa7:Completed 177500 out of 250000 steps (71%)
******************************* Date: 2020-01-28 *******************************
18:21:28:WU04:FS00:0xa7:Completed 180000 out of 250000 steps (72%)
18:23:36:WU03:FS03:0x21:Completed 3500000 out of 25000000 steps (14%)
18:25:12:WU04:FS00:0xa7:Completed 182500 out of 250000 steps (73%)
18:28:55:WU04:FS00:0xa7:Completed 185000 out of 250000 steps (74%)
18:32:41:WU04:FS00:0xa7:Completed 187500 out of 250000 steps (75%)
18:34:33:WU02:FS02:0x21:Completed 500000 out of 5000000 steps (10%)
18:36:30:WU04:FS00:0xa7:Completed 190000 out of 250000 steps (76%)
18:40:13:WU04:FS00:0xa7:Completed 192500 out of 250000 steps (77%)
18:43:42:WU01:FS01:0x21:Completed 975000 out of 7500000 steps (13%)
18:43:58:WU04:FS00:0xa7:Completed 195000 out of 250000 steps (78%)
18:47:45:WU04:FS00:0xa7:Completed 197500 out of 250000 steps (79%)
18:49:45:WU03:FS03:0x21:Completed 3750000 out of 25000000 steps (15%)
18:51:32:WU04:FS00:0xa7:Completed 200000 out of 250000 steps (80%)
18:55:15:WU04:FS00:0xa7:Completed 202500 out of 250000 steps (81%)
18:59:00:WU04:FS00:0xa7:Completed 205000 out of 250000 steps (82%)
19:02:46:WU04:FS00:0xa7:Completed 207500 out of 250000 steps (83%)
19:06:36:WU04:FS00:0xa7:Completed 210000 out of 250000 steps (84%)
19:10:23:WU04:FS00:0xa7:Completed 212500 out of 250000 steps (85%)
19:11:42:WU00:FS00:Cleaning up
[91m19:11:42:ERROR:WU00:FS00:Exception: Failed to remove directory './work/00': boost::filesystem::remove: Directory not empty: "./work/00"[0m
19:12:15:WU02:FS02:0x21:Completed 550000 out of 5000000 steps (11%)
19:13:24:WU01:FS01:0x21:Completed 1050000 out of 7500000 steps (14%)
19:14:11:WU04:FS00:0xa7:Completed 215000 out of 250000 steps (86%)
19:15:53:WU03:FS03:0x21:Completed 4000000 out of 25000000 steps (16%)
19:17:56:WU04:FS00:0xa7:Completed 217500 out of 250000 steps (87%)
19:21:45:WU04:FS00:0xa7:Completed 220000 out of 250000 steps (88%)
19:25:28:WU04:FS00:0xa7:Completed 222500 out of 250000 steps (89%)
19:29:09:WU04:FS00:0xa7:Completed 225000 out of 250000 steps (90%)
19:32:56:WU04:FS00:0xa7:Completed 227500 out of 250000 steps (91%)
19:36:44:WU04:FS00:0xa7:Completed 230000 out of 250000 steps (92%)
19:40:29:WU04:FS00:0xa7:Completed 232500 out of 250000 steps (93%)
19:41:58:WU03:FS03:0x21:Completed 4250000 out of 25000000 steps (17%)
19:43:05:WU01:FS01:0x21:Completed 1125000 out of 7500000 steps (15%)
19:44:14:WU04:FS00:0xa7:Completed 235000 out of 250000 steps (94%)
19:48:01:WU04:FS00:0xa7:Completed 237500 out of 250000 steps (95%)
19:49:54:WU02:FS02:0x21:Completed 600000 out of 5000000 steps (12%)
19:51:51:WU04:FS00:0xa7:Completed 240000 out of 250000 steps (96%)
19:55:38:WU04:FS00:0xa7:Completed 242500 out of 250000 steps (97%)
19:59:25:WU04:FS00:0xa7:Completed 245000 out of 250000 steps (98%)
20:03:11:WU04:FS00:0xa7:Completed 247500 out of 250000 steps (99%)
20:03:11:WU05:FS00:Connecting to 65.254.110.245:8080
20:03:11:WU05:FS00:Assigned to work server 155.247.166.219
20:03:11:WU05:FS00:Requesting new work unit for slot 00: RUNNING cpu:13 from 155.247.166.219
20:03:11:WU05:FS00:Connecting to 155.247.166.219:8080
20:03:12:WU05:FS00:Downloading 1.83MiB
20:03:13:WU05:FS00:Download complete
20:03:13:WU05:FS00:Received Unit: id:05 state:DOWNLOAD error:NO_ERROR project:14051 run:11 clone:22 gen:67 core:0xa7 unit:0x000000550002894b5b2c03aa6336ae44
20:07:04:WU04:FS00:0xa7:Completed 250000 out of 250000 steps (100%)
20:07:15:WU04:FS00:0xa7:Saving result file ../logfile_01.txt
20:07:15:WU04:FS00:0xa7:Saving result file ener.edr
20:07:15:WU04:FS00:0xa7:Saving result file frame118.trr
20:07:16:WU04:FS00:0xa7:Saving result file md.log
20:07:16:WU04:FS00:0xa7:Saving result file science.log
20:07:16:WU04:FS00:0xa7:Saving result file traj_comp.xtc
20:07:16:WU04:FS00:0xa7:Folding@home Core Shutdown: FINISHED_UNIT
20:07:16:WU04:FS00:FahCore returned: FINISHED_UNIT (100 = 0x64)
20:07:16:WU04:FS00:Sending unit results: id:04 state:SEND error:NO_ERROR project:14175 run:0 clone:222 gen:118 core:0xa7 unit:0x000000940002894b5cabee5a6648ecce
20:07:16:WU04:FS00:Uploading 18.35MiB to 155.247.166.219
20:07:16:WU04:FS00:Connecting to 155.247.166.219:8080
20:07:16:WU05:FS00:Starting
20:07:16:WU05:FS00:Running FahCore: /opt/fah/usr/bin/FAHCoreWrapper /config/cores/cores.foldingathome.org/v7/lin/64bit/avx/Core_a7.fah/FahCore_a7 -dir 05 -suffix 01 -version 704 -lifeline 30 -checkpoint 15 -np 13
20:07:16:WU05:FS00:Started FahCore on PID 233
20:07:16:WU05:FS00:Core PID:237
20:07:16:WU05:FS00:FahCore 0xa7 started
20:07:17:WU05:FS00:0xa7:*********************** Log Started 2020-01-28T20:07:16Z ***********************
20:07:17:WU05:FS00:0xa7:************************** Gromacs Folding@home Core ***************************
20:07:17:WU05:FS00:0xa7: Type: 0xa7
20:07:17:WU05:FS00:0xa7: Core: Gromacs
20:07:17:WU05:FS00:0xa7: Args: -dir 05 -suffix 01 -version 704 -lifeline 233 -checkpoint 15 -np 13
20:07:17:WU05:FS00:0xa7:************************************ CBang *************************************
20:07:17:WU05:FS00:0xa7: Date: Nov 5 2019
20:07:17:WU05:FS00:0xa7: Time: 06:06:57
20:07:17:WU05:FS00:0xa7: Revision: 46c96f1aa8419571d83f3e63f9c99a0d602f6da9
20:07:17:WU05:FS00:0xa7: Branch: master
20:07:17:WU05:FS00:0xa7: Compiler: GNU 8.3.0
20:07:17:WU05:FS00:0xa7: Options: -std=c++11 -O3 -funroll-loops -fno-pie -fPIC
20:07:17:WU05:FS00:0xa7: Platform: linux2 4.19.0-5-amd64
20:07:17:WU05:FS00:0xa7: Bits: 64
20:07:17:WU05:FS00:0xa7: Mode: Release
20:07:17:WU05:FS00:0xa7:************************************ System ************************************
20:07:17:WU05:FS00:0xa7: CPU: AMD Ryzen Threadripper 1920X 12-Core Processor
20:07:17:WU05:FS00:0xa7: CPU ID: AuthenticAMD Family 23 Model 1 Stepping 1
20:07:17:WU05:FS00:0xa7: CPUs: 24
20:07:17:WU05:FS00:0xa7: Memory: 31.35GiB
20:07:17:WU05:FS00:0xa7:Free Memory: 879.40MiB
20:07:17:WU05:FS00:0xa7: Threads: POSIX_THREADS
20:07:17:WU05:FS00:0xa7: OS Version: 4.19
20:07:17:WU05:FS00:0xa7:Has Battery: false
20:07:17:WU05:FS00:0xa7: On Battery: false
20:07:17:WU05:FS00:0xa7: UTC Offset: 0
20:07:17:WU05:FS00:0xa7: PID: 237
20:07:17:WU05:FS00:0xa7: CWD: /config/work
20:07:17:WU05:FS00:0xa7:******************************** Build - libFAH ********************************
20:07:17:WU05:FS00:0xa7: Version: 0.0.18
20:07:17:WU05:FS00:0xa7: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
20:07:17:WU05:FS00:0xa7: Copyright: 2019 foldingathome.org
20:07:17:WU05:FS00:0xa7: Homepage: https://foldingathome.org/
20:07:17:WU05:FS00:0xa7: Date: Nov 5 2019
20:07:17:WU05:FS00:0xa7: Time: 06:13:26
20:07:17:WU05:FS00:0xa7: Revision: 490c9aa2957b725af319379424d5c5cb36efb656
20:07:17:WU05:FS00:0xa7: Branch: master
20:07:17:WU05:FS00:0xa7: Compiler: GNU 8.3.0
20:07:17:WU05:FS00:0xa7: Options: -std=c++11 -O3 -funroll-loops -fno-pie
20:07:17:WU05:FS00:0xa7: Platform: linux2 4.19.0-5-amd64
20:07:17:WU05:FS00:0xa7: Bits: 64
20:07:17:WU05:FS00:0xa7: Mode: Release
20:07:17:WU05:FS00:0xa7:************************************ Build *************************************
20:07:17:WU05:FS00:0xa7: SIMD: avx_256
20:07:17:WU05:FS00:0xa7:********************************************************************************
20:07:17:WU05:FS00:0xa7:Project: 14051 (Run 11, Clone 22, Gen 67)
20:07:17:WU05:FS00:0xa7:Unit: 0x000000550002894b5b2c03aa6336ae44
20:07:17:WU05:FS00:0xa7:Reading tar file core.xml
20:07:17:WU05:FS00:0xa7:Reading tar file frame67.tpr
20:07:17:WU05:FS00:0xa7:Digital signatures verified
20:07:17:WU05:FS00:0xa7:Reducing thread count from 13 to 12 to avoid domain decomposition by a prime number > 3
20:07:17:WU05:FS00:0xa7:Calling: mdrun -s frame67.tpr -o frame67.trr -cpt 15 -nt 12
20:07:17:WU05:FS00:0xa7:Steps: first=167500000 total=2500000
20:07:17:WU05:FS00:0xa7:Completed 1 out of 2500000 steps (0%)
20:07:22:WU04:FS00:Upload 35.43%
20:07:28:WU04:FS00:Upload 69.49%
20:07:34:WU04:FS00:Upload complete
20:07:34:WU04:FS00:Server responded WORK_ACK (400)
20:07:34:WU04:FS00:Final credit estimate, 25942.00 points
20:07:34:WU04:FS00:Cleaning up
[91m20:07:34:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
20:07:34:WU04:FS00:Cleaning up
[91m20:07:34:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
20:08:05:WU03:FS03:0x21:Completed 4500000 out of 25000000 steps (18%)
20:08:34:WU04:FS00:Cleaning up
[91m20:08:34:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
20:10:09:WU05:FS00:0xa7:Completed 25000 out of 2500000 steps (1%)
20:10:11:WU04:FS00:Cleaning up
[91m20:10:11:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
20:12:46:WU01:FS01:0x21:Completed 1200000 out of 7500000 steps (16%)
20:12:49:WU04:FS00:Cleaning up
[91m20:12:49:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
20:13:01:WU05:FS00:0xa7:Completed 50000 out of 2500000 steps (2%)
20:15:54:WU05:FS00:0xa7:Completed 75000 out of 2500000 steps (3%)
20:17:03:WU04:FS00:Cleaning up
[91m20:17:03:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
20:18:49:WU05:FS00:0xa7:Completed 100000 out of 2500000 steps (4%)
20:21:41:WU05:FS00:0xa7:Completed 125000 out of 2500000 steps (5%)
20:23:55:WU04:FS00:Cleaning up
[91m20:23:55:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
20:24:34:WU05:FS00:0xa7:Completed 150000 out of 2500000 steps (6%)
20:27:29:WU05:FS00:0xa7:Completed 175000 out of 2500000 steps (7%)
20:27:33:WU02:FS02:0x21:Completed 650000 out of 5000000 steps (13%)
20:30:22:WU05:FS00:0xa7:Completed 200000 out of 2500000 steps (8%)
20:33:16:WU05:FS00:0xa7:Completed 225000 out of 2500000 steps (9%)
20:34:12:WU03:FS03:0x21:Completed 4750000 out of 25000000 steps (19%)
20:35:00:WU04:FS00:Cleaning up
[91m20:35:00:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
20:36:08:WU05:FS00:0xa7:Completed 250000 out of 2500000 steps (10%)
20:39:04:WU05:FS00:0xa7:Completed 275000 out of 2500000 steps (11%)
20:41:57:WU05:FS00:0xa7:Completed 300000 out of 2500000 steps (12%)
20:42:24:WU01:FS01:0x21:Completed 1275000 out of 7500000 steps (17%)
20:44:50:WU05:FS00:0xa7:Completed 325000 out of 2500000 steps (13%)
20:47:43:WU05:FS00:0xa7:Completed 350000 out of 2500000 steps (14%)
20:50:35:WU05:FS00:0xa7:Completed 375000 out of 2500000 steps (15%)
20:52:57:WU04:FS00:Cleaning up
[91m20:52:57:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
20:53:26:WU05:FS00:0xa7:Completed 400000 out of 2500000 steps (16%)
20:56:22:WU05:FS00:0xa7:Completed 425000 out of 2500000 steps (17%)
20:59:16:WU05:FS00:0xa7:Completed 450000 out of 2500000 steps (18%)
21:00:18:WU03:FS03:0x21:Completed 5000000 out of 25000000 steps (20%)
21:02:11:WU05:FS00:0xa7:Completed 475000 out of 2500000 steps (19%)
21:05:07:WU05:FS00:0xa7:Completed 500000 out of 2500000 steps (20%)
21:05:10:WU02:FS02:0x21:Completed 700000 out of 5000000 steps (14%)
21:08:00:WU05:FS00:0xa7:Completed 525000 out of 2500000 steps (21%)
21:10:55:WU05:FS00:0xa7:Completed 550000 out of 2500000 steps (22%)
21:12:03:WU01:FS01:0x21:Completed 1350000 out of 7500000 steps (18%)
21:13:50:WU05:FS00:0xa7:Completed 575000 out of 2500000 steps (23%)
21:16:45:WU05:FS00:0xa7:Completed 600000 out of 2500000 steps (24%)
21:19:39:WU05:FS00:0xa7:Completed 625000 out of 2500000 steps (25%)
21:21:59:WU04:FS00:Cleaning up
[91m21:21:59:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
21:22:35:WU05:FS00:0xa7:Completed 650000 out of 2500000 steps (26%)
21:25:27:WU05:FS00:0xa7:Completed 675000 out of 2500000 steps (27%)
21:26:22:WU03:FS03:0x21:Completed 5250000 out of 25000000 steps (21%)
21:28:18:WU05:FS00:0xa7:Completed 700000 out of 2500000 steps (28%)
21:31:09:WU05:FS00:0xa7:Completed 725000 out of 2500000 steps (29%)
21:34:01:WU05:FS00:0xa7:Completed 750000 out of 2500000 steps (30%)
21:36:54:WU05:FS00:0xa7:Completed 775000 out of 2500000 steps (31%)
21:39:48:WU05:FS00:0xa7:Completed 800000 out of 2500000 steps (32%)
21:41:39:WU01:FS01:0x21:Completed 1425000 out of 7500000 steps (19%)
21:42:39:WU05:FS00:0xa7:Completed 825000 out of 2500000 steps (33%)
21:42:47:WU02:FS02:0x21:Completed 750000 out of 5000000 steps (15%)
21:45:33:WU05:FS00:0xa7:Completed 850000 out of 2500000 steps (34%)
21:48:25:WU05:FS00:0xa7:Completed 875000 out of 2500000 steps (35%)
21:51:16:WU05:FS00:0xa7:Completed 900000 out of 2500000 steps (36%)
21:52:27:WU03:FS03:0x21:Completed 5500000 out of 25000000 steps (22%)
21:54:08:WU05:FS00:0xa7:Completed 925000 out of 2500000 steps (37%)
21:57:01:WU05:FS00:0xa7:Completed 950000 out of 2500000 steps (38%)
21:59:54:WU05:FS00:0xa7:Completed 975000 out of 2500000 steps (39%)
22:02:49:WU05:FS00:0xa7:Completed 1000000 out of 2500000 steps (40%)
22:05:43:WU05:FS00:0xa7:Completed 1025000 out of 2500000 steps (41%)
22:08:35:WU05:FS00:0xa7:Completed 1050000 out of 2500000 steps (42%)
22:08:58:WU04:FS00:Cleaning up
[91m22:08:58:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
22:11:17:WU01:FS01:0x21:Completed 1500000 out of 7500000 steps (20%)
22:11:29:WU05:FS00:0xa7:Completed 1075000 out of 2500000 steps (43%)
22:14:21:WU05:FS00:0xa7:Completed 1100000 out of 2500000 steps (44%)
22:17:13:WU05:FS00:0xa7:Completed 1125000 out of 2500000 steps (45%)
22:18:31:WU03:FS03:0x21:Completed 5750000 out of 25000000 steps (23%)
22:20:05:WU05:FS00:0xa7:Completed 1150000 out of 2500000 steps (46%)
22:20:28:WU02:FS02:0x21:Completed 800000 out of 5000000 steps (16%)
22:22:58:WU05:FS00:0xa7:Completed 1175000 out of 2500000 steps (47%)
22:25:16:37:10.10.0.230:New Web connection
22:25:48:WU05:FS00:0xa7:Completed 1200000 out of 2500000 steps (48%)
22:28:38:WU05:FS00:0xa7:Completed 1225000 out of 2500000 steps (49%)
22:30:42:WU00:FS00:Cleaning up
22:31:33:WU05:FS00:0xa7:Completed 1250000 out of 2500000 steps (50%)
22:34:25:WU05:FS00:0xa7:Completed 1275000 out of 2500000 steps (51%)
22:37:16:WU05:FS00:0xa7:Completed 1300000 out of 2500000 steps (52%)
22:40:09:WU05:FS00:0xa7:Completed 1325000 out of 2500000 steps (53%)
22:40:55:WU01:FS01:0x21:Completed 1575000 out of 7500000 steps (21%)
22:43:02:WU05:FS00:0xa7:Completed 1350000 out of 2500000 steps (54%)
22:44:35:WU03:FS03:0x21:Completed 6000000 out of 25000000 steps (24%)
22:45:52:WU05:FS00:0xa7:Completed 1375000 out of 2500000 steps (55%)
22:48:44:WU05:FS00:0xa7:Completed 1400000 out of 2500000 steps (56%)
22:51:36:WU05:FS00:0xa7:Completed 1425000 out of 2500000 steps (57%)
22:54:29:WU05:FS00:0xa7:Completed 1450000 out of 2500000 steps (58%)
22:57:20:WU05:FS00:0xa7:Completed 1475000 out of 2500000 steps (59%)
22:58:06:WU02:FS02:0x21:Completed 850000 out of 5000000 steps (17%)
23:00:14:WU05:FS00:0xa7:Completed 1500000 out of 2500000 steps (60%)
23:03:08:WU05:FS00:0xa7:Completed 1525000 out of 2500000 steps (61%)
23:06:00:WU05:FS00:0xa7:Completed 1550000 out of 2500000 steps (62%)
23:08:53:WU05:FS00:0xa7:Completed 1575000 out of 2500000 steps (63%)
23:10:32:WU01:FS01:0x21:Completed 1650000 out of 7500000 steps (22%)
23:10:43:WU03:FS03:0x21:Completed 6250000 out of 25000000 steps (25%)
23:11:45:WU05:FS00:0xa7:Completed 1600000 out of 2500000 steps (64%)
23:14:35:WU05:FS00:0xa7:Completed 1625000 out of 2500000 steps (65%)
23:17:26:WU05:FS00:0xa7:Completed 1650000 out of 2500000 steps (66%)
23:20:17:WU05:FS00:0xa7:Completed 1675000 out of 2500000 steps (67%)
23:23:10:WU05:FS00:0xa7:Completed 1700000 out of 2500000 steps (68%)
23:24:59:WU04:FS00:Cleaning up
[91m23:24:59:ERROR:WU04:FS00:Exception: Failed to remove directory './work/04': boost::filesystem::remove: Directory not empty: "./work/04"[0m
23:26:01:WU05:FS00:0xa7:Completed 1725000 out of 2500000 steps (69%)
23:28:56:WU05:FS00:0xa7:Completed 1750000 out of 2500000 steps (70%)
23:31:49:WU05:FS00:0xa7:Completed 1775000 out of 2500000 steps (71%)
23:34:43:WU05:FS00:0xa7:Completed 1800000 out of 2500000 steps (72%)
23:35:44:WU02:FS02:0x21:Completed 900000 out of 5000000 steps (18%)
23:36:47:WU03:FS03:0x21:Completed 6500000 out of 25000000 steps (26%)
23:37:36:WU05:FS00:0xa7:Completed 1825000 out of 2500000 steps (73%)
23:40:08:WU01:FS01:0x21:Completed 1725000 out of 7500000 steps (23%)
23:40:28:WU05:FS00:0xa7:Completed 1850000 out of 2500000 steps (74%)
23:43:18:WU05:FS00:0xa7:Completed 1875000 out of 2500000 steps (75%)
23:46:10:WU05:FS00:0xa7:Completed 1900000 out of 2500000 steps (76%)
23:49:01:WU05:FS00:0xa7:Completed 1925000 out of 2500000 steps (77%)
23:51:52:WU05:FS00:0xa7:Completed 1950000 out of 2500000 steps (78%)
23:54:46:WU05:FS00:0xa7:Completed 1975000 out of 2500000 steps (79%)
23:57:41:WU05:FS00:0xa7:Completed 2000000 out of 2500000 steps (80%)
00:00:34:WU05:FS00:0xa7:Completed 2025000 out of 2500000 steps (81%)
00:02:54:WU03:FS03:0x21:Completed 6750000 out of 25000000 steps (27%)
00:03:26:WU05:FS00:0xa7:Completed 2050000 out of 2500000 steps (82%)
00:06:18:WU05:FS00:0xa7:Completed 2075000 out of 2500000 steps (83%)
00:09:10:WU05:FS00:0xa7:Completed 2100000 out of 2500000 steps (84%)
00:09:46:WU01:FS01:0x21:Completed 1800000 out of 7500000 steps (24%)
00:12:03:WU05:FS00:0xa7:Completed 2125000 out of 2500000 steps (85%)
00:13:21:WU02:FS02:0x21:Completed 950000 out of 5000000 steps (19%)
00:14:56:WU05:FS00:0xa7:Completed 2150000 out of 2500000 steps (86%)
00:17:48:WU05:FS00:0xa7:Completed 2175000 out of 2500000 steps (87%)
00:20:41:WU05:FS00:0xa7:Completed 2200000 out of 2500000 steps (88%)
******************************* Date: 2020-01-29 *******************************
00:23:34:WU05:FS00:0xa7:Completed 2225000 out of 2500000 steps (89%)
00:26:28:WU05:FS00:0xa7:Completed 2250000 out of 2500000 steps (90%)
00:29:02:WU03:FS03:0x21:Completed 7000000 out of 25000000 steps (28%)
00:29:21:WU05:FS00:0xa7:Completed 2275000 out of 2500000 steps (91%)
00:32:15:WU05:FS00:0xa7:Completed 2300000 out of 2500000 steps (92%)
00:35:10:WU05:FS00:0xa7:Completed 2325000 out of 2500000 steps (93%)
00:38:08:WU05:FS00:0xa7:Completed 2350000 out of 2500000 steps (94%)
00:39:25:WU01:FS01:0x21:Completed 1875000 out of 7500000 steps (25%)
00:41:03:WU05:FS00:0xa7:Completed 2375000 out of 2500000 steps (95%)
00:43:58:WU05:FS00:0xa7:Completed 2400000 out of 2500000 steps (96%)
00:46:52:WU05:FS00:0xa7:Completed 2425000 out of 2500000 steps (97%)
00:49:46:WU05:FS00:0xa7:Completed 2450000 out of 2500000 steps (98%)
00:50:58:WU02:FS02:0x21:Completed 1000000 out of 5000000 steps (20%)
00:52:42:WU05:FS00:0xa7:Completed 2475000 out of 2500000 steps (99%)
00:52:43:WU00:FS00:Connecting to 65.254.110.245:8080
00:52:43:WU00:FS00:Assigned to work server 128.252.203.9
00:52:43:WU00:FS00:Requesting new work unit for slot 00: RUNNING cpu:13 from 128.252.203.9
00:52:43:WU00:FS00:Connecting to 128.252.203.9:8080
00:52:43:WU00:FS00:Downloading 7.72MiB
00:52:44:WU00:FS00:Download complete
00:52:44:WU00:FS00:Received Unit: id:00 state:DOWNLOAD error:NO_ERROR project:14401 run:0 clone:3135 gen:13 core:0xa7 unit:0x0000001080fccb095dcb2ee314ea943d
00:55:10:WU03:FS03:0x21:Completed 7250000 out of 25000000 steps (29%)
00:55:37:WU05:FS00:0xa7:Completed 2500000 out of 2500000 steps (100%)
00:55:38:WU05:FS00:0xa7:Saving result file ../logfile_01.txt
00:55:38:WU05:FS00:0xa7:Saving result file ener.edr
00:55:38:WU05:FS00:0xa7:Saving result file frame67.trr
00:55:38:WU05:FS00:0xa7:Saving result file md.log
00:55:38:WU05:FS00:0xa7:Saving result file science.log
00:55:38:WU05:FS00:0xa7:Saving result file traj_comp.xtc
00:55:38:WU05:FS00:0xa7:Folding@home Core Shutdown: FINISHED_UNIT
00:55:39:WU05:FS00:FahCore returned: FINISHED_UNIT (100 = 0x64)
00:55:39:WU05:FS00:Sending unit results: id:05 state:SEND error:NO_ERROR project:14051 run:11 clone:22 gen:67 core:0xa7 unit:0x000000550002894b5b2c03aa6336ae44
00:55:39:WU05:FS00:Uploading 7.48MiB to 155.247.166.219
00:55:39:WU05:FS00:Connecting to 155.247.166.219:8080
00:55:39:WU00:FS00:Starting
00:55:39:WU00:FS00:Running FahCore: /opt/fah/usr/bin/FAHCoreWrapper /config/cores/cores.foldingathome.org/v7/lin/64bit/avx/Core_a7.fah/FahCore_a7 -dir 00 -suffix 01 -version 704 -lifeline 30 -checkpoint 15 -np 13
00:55:39:WU00:FS00:Started FahCore on PID 277
00:55:39:WU00:FS00:Core PID:281
00:55:39:WU00:FS00:FahCore 0xa7 started
00:55:39:WU00:FS00:0xa7:*********************** Log Started 2020-01-29T00:55:39Z ***********************
00:55:39:WU00:FS00:0xa7:************************** Gromacs Folding@home Core ***************************
00:55:39:WU00:FS00:0xa7: Type: 0xa7
00:55:39:WU00:FS00:0xa7: Core: Gromacs
00:55:39:WU00:FS00:0xa7: Args: -dir 00 -suffix 01 -version 704 -lifeline 277 -checkpoint 15 -np 13
00:55:39:WU00:FS00:0xa7:************************************ CBang *************************************
00:55:39:WU00:FS00:0xa7: Date: Nov 5 2019
00:55:39:WU00:FS00:0xa7: Time: 06:06:57
00:55:39:WU00:FS00:0xa7: Revision: 46c96f1aa8419571d83f3e63f9c99a0d602f6da9
00:55:39:WU00:FS00:0xa7: Branch: master
00:55:39:WU00:FS00:0xa7: Compiler: GNU 8.3.0
00:55:39:WU00:FS00:0xa7: Options: -std=c++11 -O3 -funroll-loops -fno-pie -fPIC
00:55:39:WU00:FS00:0xa7: Platform: linux2 4.19.0-5-amd64
00:55:39:WU00:FS00:0xa7: Bits: 64
00:55:39:WU00:FS00:0xa7: Mode: Release
00:55:39:WU00:FS00:0xa7:************************************ System ************************************
00:55:39:WU00:FS00:0xa7: CPU: AMD Ryzen Threadripper 1920X 12-Core Processor
00:55:39:WU00:FS00:0xa7: CPU ID: AuthenticAMD Family 23 Model 1 Stepping 1
00:55:39:WU00:FS00:0xa7: CPUs: 24
00:55:39:WU00:FS00:0xa7: Memory: 31.35GiB
00:55:39:WU00:FS00:0xa7:Free Memory: 240.45MiB
00:55:39:WU00:FS00:0xa7: Threads: POSIX_THREADS
00:55:39:WU00:FS00:0xa7: OS Version: 4.19
00:55:39:WU00:FS00:0xa7:Has Battery: false
00:55:39:WU00:FS00:0xa7: On Battery: false
00:55:39:WU00:FS00:0xa7: UTC Offset: 0
00:55:39:WU00:FS00:0xa7: PID: 281
00:55:39:WU00:FS00:0xa7: CWD: /config/work
00:55:39:WU00:FS00:0xa7:******************************** Build - libFAH ********************************
00:55:39:WU00:FS00:0xa7: Version: 0.0.18
00:55:39:WU00:FS00:0xa7: Author: Joseph Coffland <joseph@cauldrondevelopment.com>
00:55:39:WU00:FS00:0xa7: Copyright: 2019 foldingathome.org
00:55:39:WU00:FS00:0xa7: Homepage: https://foldingathome.org/
00:55:39:WU00:FS00:0xa7: Date: Nov 5 2019
00:55:39:WU00:FS00:0xa7: Time: 06:13:26
00:55:39:WU00:FS00:0xa7: Revision: 490c9aa2957b725af319379424d5c5cb36efb656
00:55:39:WU00:FS00:0xa7: Branch: master
00:55:39:WU00:FS00:0xa7: Compiler: GNU 8.3.0
00:55:39:WU00:FS00:0xa7: Options: -std=c++11 -O3 -funroll-loops -fno-pie
00:55:39:WU00:FS00:0xa7: Platform: linux2 4.19.0-5-amd64
00:55:39:WU00:FS00:0xa7: Bits: 64
00:55:39:WU00:FS00:0xa7: Mode: Release
00:55:39:WU00:FS00:0xa7:************************************ Build *************************************
00:55:39:WU00:FS00:0xa7: SIMD: avx_256
00:55:39:WU00:FS00:0xa7:********************************************************************************
Re: Poor Quadro Performance
Posted: Wed Jan 29, 2020 3:14 pm
by JimboPalmer
You are not using the latest client, so it handles the number of CPU clients poorly.
https://foldingathome.org/alternative-downloads/
Once on 7.5.1, I would set power to full and CPUs to 18 (or 20) To avoid 'large primes', you are using 12 of the 24 CPU Threads.
If you do a clean install of 7.5.1 it will have the best chance to detect all the GPUs correctly.
If as I suspect, the CPUs are just misrepresented, you will not get more points, it will just allocate the points to the right CPU.
Good news, the CPU is using the best algorithm, 'avx_256'
You may wish to do a test with CPUs = 24 and no GPUs active. your rig may make more Points Per Day that way. Very new CPU versus very old, entry level, GPUs.
Re: Poor Quadro Performance
Posted: Wed Jan 29, 2020 11:09 pm
by ColonelRyzen
JimboPalmer wrote:You are not using the latest client, so it handles the number of CPU clients poorly.
https://foldingathome.org/alternative-downloads/
Once on 7.5.1, I would set power to full and CPUs to 18 (or 20) To avoid 'large primes', you are using 12 of the 24 CPU Threads.
If you do a clean install of 7.5.1 it will have the best chance to detect all the GPUs correctly.
If as I suspect, the CPUs are just misrepresented, you will not get more points, it will just allocate the points to the right CPU.
Good news, the CPU is using the best algorithm, 'avx_256'
You may wish to do a test with CPUs = 24 and no GPUs active. your rig may make more Points Per Day that way. Very new CPU versus very old, entry level, GPUs.
I am on UnRAID and this is the docker container for it. They haven't updated the version yet. I am reserving 8 of my threads for general server tasks so I can't max it out. I got the GPUs for free so I am trying to make use of them the best I can. I'll see if I can find a way to update the FAH version. Thanks!
Re: Poor Quadro Performance
Posted: Thu Jan 30, 2020 8:35 am
by bruce
The GT 730 (Fermi) with 96 cores @ 700 GHz ... or
... the GT 730 (Kepler) with 384 cores @ 902 to 993 GHz is getting 14K PPD
The K2000 (Kepler) with 384 cores @ 625 Ghz is getting 31K PPD
The K4000 (Kepler) with 768 cores @ 800 GHz is getting 17.5K PPD
Your GPUs are pretty limited, but for free at least they're working.
I'd guess that your GT730 is the Fermi model.
I's also concur with JimboPalmer that your system has confused the K4000 and K2000 for each other
Re: Poor Quadro Performance
Posted: Thu Jan 30, 2020 3:57 pm
by JimboPalmer
So long as you are OK with the confusion of the K2000 and the K4000, I think 7.4.4 is fine.
As I read the log, you are using 12 of the 24 CPU threads.
12:17:54:WU00:FS00:0xa7:Reducing thread count from 13 to 12 to avoid domain decomposition by a prime number > 3
In Configuration, then Slots CPUs is most likely -1 (let F@H decide) you may wish to set it to 16.