Project 14125 (GPU, OpenMM21) to ADVANCED
Posted: Sat Dec 29, 2018 9:20 pm
Releasing OpenMM21 project to ADVANCED
These simulations are designed to test our understanding the folding mechanism of alpha-helical hairpins. We are trying to study how disulfide cross-linkers and sequence variants affect the folding thermodynamics and kinetics of these proteins, to learn how we might better use molecular simulation methods to design effective protein binder scaffolds, for use as "affibody" cancer therapeutics, for example.
project number: 14125
stats credit: 31800
timeout: 7
deadline 10
k-factor =0.75
number of atoms: 13791
These simulations are designed to test our understanding the folding mechanism of alpha-helical hairpins. We are trying to study how disulfide cross-linkers and sequence variants affect the folding thermodynamics and kinetics of these proteins, to learn how we might better use molecular simulation methods to design effective protein binder scaffolds, for use as "affibody" cancer therapeutics, for example.
project number: 14125
stats credit: 31800
timeout: 7
deadline 10
k-factor =0.75
number of atoms: 13791