Folding Forum

Posted: **Thu Sep 16, 2010 7:16 am**

Simply reporting a problem with this WU. It quit after 47%. Running Linux Console Edition Folding@Home Client Version 6.02, Slackware 13.1

Code: Select all

[04:57:04] - Preparing to get new work unit...
[04:57:04] + Attempting to get work packet
[04:57:04] - Will indicate memory of 1008 MB
[04:57:04] - Connecting to assignment server
[04:57:04] Connecting to http://assign.stanford.edu:8080/
[04:57:05] Posted data.
[04:57:05] Initial: 43AB; - Successful: assigned to (171.67.108.33).
[04:57:05] + News From Folding@Home: Welcome to Folding@Home
[04:57:06] Loaded queue successfully.
[04:57:06] Connecting to http://171.67.108.33:8080/
[04:57:08] Posted data.
[04:57:08] Initial: 0000; - Receiving payload (expected size: 766929)
[04:57:22] - Downloaded at ~53 kB/s
[04:57:22] - Averaged speed for that direction ~51 kB/s
[04:57:22] + Received work.
[04:57:22] Trying to send all finished work units
[04:57:22] + No unsent completed units remaining.
[04:57:22] + Closed connections
[04:57:22] 
[04:57:22] + Processing work unit
[04:57:22] Core required: FahCore_78.exe
[04:57:22] Core found.
[04:57:22] Working on Unit 08 [September 15 04:57:22]
[04:57:22] + Working ...
[04:57:22] - Calling './FahCore_78.exe -dir work/ -suffix 08 -checkpoint 15 -verbose -lifeline 1424 -version 602'

[04:57:22] 
[04:57:22] *------------------------------*
[04:57:22] Folding@Home Gromacs Core
[04:57:22] Version 1.90 (March 8, 2006)
[04:57:22] 
[04:57:22] Preparing to commence simulation
[04:57:22] - Looking at optimizations...
[04:57:22] - Created dyn
[04:57:22] - Files status OK
[04:57:23] - Expanded 766417 -> 4777964 (decompressed 623.4 percent)
[04:57:23] - Starting from initial work packet
[04:57:23] 
[04:57:23] Project: 11278 (Run 1, Clone 26, Gen 0)
[04:57:23] 
[04:57:23] Assembly optimizations on if available.
[04:57:23] Entering M.D.

  Gromacs is Copyright (c) 1991-2003, University of Groningen, The Netherlands
        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[04:57:29] Protein: ALZHEIMERS DISEASE AMYLOID
[04:57:29] 
[04:57:29] Writing local files
[04:58:05] Extra SSE boost OK.
[04:58:05] Writing local files
[04:58:06] Completed 0 out of 250000 steps  (0%)
[05:13:05] Timered checkpoint triggered.
[05:28:05] Timered checkpoint triggered.
[05:28:43] Writing local files
[05:28:43] Completed 2500 out of 250000 steps  (1%)
<<<<< SNIP >>>>>>
[05:26:40] Completed 115000 out of 250000 steps  (46%)
[05:41:41] Timered checkpoint triggered.
[05:56:42] Timered checkpoint triggered.
[05:59:06] Writing local files
[05:59:06] Completed 117500 out of 250000 steps  (47%)
[06:10:38] CoreStatus = 0 (0)
[06:10:38] Client-core communications error: ERROR 0x0
[06:10:38] Deleting current work unit & continuing...

Downloaded and started processing new work unit with same project info; Project: 11278 (Run 1, Clone 26, Gen 0)

Code: Select all

[06:11:14] - Preparing to get new work unit...
[06:11:14] + Attempting to get work packet
[06:11:14] - Will indicate memory of 1008 MB
[06:11:14] - Connecting to assignment server
[06:11:14] Connecting to http://assign.stanford.edu:8080/
[06:11:15] Posted data.
[06:11:15] Initial: 43AB; - Successful: assigned to (171.67.108.33).
[06:11:15] + News From Folding@Home: Welcome to Folding@Home
[06:11:15] Loaded queue successfully.
[06:11:15] Connecting to http://171.67.108.33:8080/
[06:11:17] Posted data.
[06:11:17] Initial: 0000; - Receiving payload (expected size: 766929)
[06:11:32] - Downloaded at ~49 kB/s
[06:11:32] - Averaged speed for that direction ~51 kB/s
[06:11:32] + Received work.
[06:11:32] + Closed connections
[06:11:37] 
[06:11:37] + Processing work unit
[06:11:37] Core required: FahCore_78.exe
[06:11:37] Core found.
[06:11:37] Working on Unit 09 [September 16 06:11:37]
[06:11:37] + Working ...
[06:11:37] - Calling './FahCore_78.exe -dir work/ -suffix 09 -checkpoint 15 -verbose -lifeline 1424 -version 602'

[06:11:37] 
[06:11:37] *------------------------------*
[06:11:37] Folding@Home Gromacs Core
[06:11:37] Version 1.90 (March 8, 2006)
[06:11:37] 
[06:11:37] Preparing to commence simulation
[06:11:37] - Looking at optimizations...
[06:11:37] - Created dyn
[06:11:37] - Files status OK
[06:11:37] - Expanded 766417 -> 4777964 (decompressed 623.4 percent)
[06:11:37] - Starting from initial work packet
[06:11:37] 
[06:11:37] Project: 11278 (Run 1, Clone 26, Gen 0)
[06:11:37] 
[06:11:37] Assembly optimizations on if available.
[06:11:37] Entering M.D.

  Gromacs is Copyright (c) 1991-2003, University of Groningen, The Netherlands
        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[06:11:44] Protein: ALZHEIMERS DISEASE AMYLOID
[06:11:44] 
[06:11:44] Writing local files
[06:12:19] Extra SSE boost OK.
[06:12:20] Writing local files
[06:12:20] Completed 0 out of 250000 steps  (0%)
[06:27:20] Timered checkpoint triggered.
[06:42:21] Timered checkpoint triggered.
[06:42:53] Writing local files
[06:42:53] Completed 2500 out of 250000 steps  (1%)
[06:57:53] Timered checkpoint triggered.

Posted: **Thu Sep 16, 2010 4:47 pm**

No data back from anyone yet on this one, but I will mark it so the moderators will know to check back on it.

Thanks for the reports.

Posted: **Thu Sep 16, 2010 11:41 pm**

The new WU is currently at 32%, I am keeping a close eye on it. I will report back the results. Hopefully completion to 100%

Posted: **Sat Sep 18, 2010 5:36 pm**

I still see no results from anyone on this WU. It seems it has had time to complete by now given your last report.

Posted: **Sat Sep 18, 2010 10:06 pm**

The WU completed last night. Here are the log results. I got a whopping 209 points for this one. Not bad for a Gromacs WU!

It took a while because there was two interruptions during the running of the WU one of which was a several hour long power failure (normal around here). The new WU is Project: 11277 (Run 6, Clone 65, Gen 1), it's at 11%. also worth 209 points.

Code: Select all

[06:11:37] Project: 11278 (Run 1, Clone 26, Gen 0)
[06:11:37] 
[06:11:37] Assembly optimizations on if available.
[06:11:37] Entering M.D.

  Gromacs is Copyright (c) 1991-2003, University of Groningen, The Netherlands
        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[06:11:44] Protein: ALZHEIMERS DISEASE AMYLOID
[06:11:44] 
[06:11:44] Writing local files
[06:12:19] Extra SSE boost OK.
[06:12:20] Writing local files
[06:12:20] Completed 0 out of 250000 steps  (0%)
===== SNIP ======
[14:27:50] Completed 250000 out of 250000 steps  (100%)
[14:27:50] Writing final coordinates.


[14:27:50] Past main M.D. loop
[14:28:50] 
[14:28:50] Finished Work Unit:
[14:28:50] - Reading up to 823824 from "work/wudata_09.arc": Read 823824
[14:28:50] - Reading up to 739220 from "work/wudata_09.xtc": Read 739220
[14:28:50] goefile size: 0
[14:28:50] logfile size: 31493
[14:28:50] Leaving Run
[14:28:53] - Writing 1600445 bytes of core data to disk...
[14:28:54] Done: 1599933 -> 1505948 (compressed to 94.1 percent)
[14:28:54]   ... Done.
[14:29:03] - Shutting down core
[14:29:03] 
[14:29:03] Folding@home Core Shutdown: FINISHED_UNIT
[14:29:20] CoreStatus = 64 (100)
[14:29:20] Unit 9 finished with 96 percent of time to deadline remaining.
[14:29:20] Updated performance fraction: 0.956048
[14:29:20] Sending work to server
[14:29:20] - Read packet limit of 540015616... Set to 524286976.


[14:29:20] + Attempting to send results
[14:29:20] - Reading file work/wuresults_09.dat from core
[14:29:20]   (Read 1506460 bytes from disk)
[14:29:20] Connecting to http://171.67.108.33:8080/
[14:30:36] Posted data.
[14:30:36] Initial: 0000; - Uploaded at ~19 kB/s
[14:30:36] - Averaged speed for that direction ~19 kB/s
[14:30:36] + Results successfully sent
[14:30:36] Thank you for your contribution to Folding@Home.

Posted: **Sat Sep 18, 2010 10:34 pm**

I'm glad to hear it completed and went home, but I'm still not seeing anything in the database.

I am not seeing the 209 points for Project: 11278 (Run 1, Clone 26, Gen 0), but I do see the latest WU returned for one of your clients, Project: 11278 (Run 1, Clone 26, Gen 1) (notice this is a different Gen number) did receive 209 points .

From the mod database:

Hi chrisretusn (team 2291),
Your WU (P11278 R1 C26 G1) was added to the stats database on 2010-09-18 08:08:24 for 209 points of credit.

Posted: **Sun Sep 19, 2010 12:27 am**

The server is showing in Reject status and that project doesn't appear on the project list. I notified the appropriate Pande Group personnel about this, so somebody will take a look. Since it is the weekend, no guarantees that will happen before Monday.

Posted: **Sun Sep 19, 2010 12:36 am**

It would be interesting to see the logs you snipped out.

[06:12:20] Completed 0 out of 250000 steps (0%)
===== SNIP ======
[14:27:50] Completed 250000 out of 250000 steps (100%)

I can't see what WU you actually sent back.

Posted: **Sun Sep 19, 2010 11:47 am**

Ask and you share receive.

Code: Select all

[06:12:20] Completed 0 out of 250000 steps  (0%)
[06:27:20] Timered checkpoint triggered.
[06:42:21] Timered checkpoint triggered.
[06:42:53] Writing local files
[06:42:53] Completed 2500 out of 250000 steps  (1%)
[06:57:53] Timered checkpoint triggered.
[07:12:54] Timered checkpoint triggered.
[07:13:37] Writing local files
[07:13:37] Completed 5000 out of 250000 steps  (2%)
[07:28:37] Timered checkpoint triggered.
[07:43:38] Timered checkpoint triggered.
[07:44:26] Writing local files
[07:44:26] Completed 7500 out of 250000 steps  (3%)
[07:59:27] Timered checkpoint triggered.
[08:14:28] Timered checkpoint triggered.
[08:15:17] Writing local files
[08:15:17] Completed 10000 out of 250000 steps  (4%)
[08:30:16] Timered checkpoint triggered.
[08:45:17] Timered checkpoint triggered.
[08:46:15] Writing local files
[08:46:15] Completed 12500 out of 250000 steps  (5%)
[09:01:14] Timered checkpoint triggered.
[09:03:37] - Autosending finished units...
[09:03:37] Trying to send all finished work units
[09:03:37] + No unsent completed units remaining.
[09:03:37] - Autosend completed
[09:16:14] Timered checkpoint triggered.
[09:17:12] Writing local files
[09:17:12] Completed 15000 out of 250000 steps  (6%)
[09:32:13] Timered checkpoint triggered.
[09:47:12] Timered checkpoint triggered.
[09:48:19] Writing local files
[09:48:19] Completed 17500 out of 250000 steps  (7%)
[10:03:20] Timered checkpoint triggered.
[10:18:19] Timered checkpoint triggered.
[10:19:24] Writing local files
[10:19:24] Completed 20000 out of 250000 steps  (8%)
[10:34:25] Timered checkpoint triggered.
[10:49:25] Timered checkpoint triggered.
[10:50:36] Writing local files
[10:50:36] Completed 22500 out of 250000 steps  (9%)
[11:05:37] Timered checkpoint triggered.
[11:20:37] Timered checkpoint triggered.
[11:21:49] Writing local files
[11:21:49] Completed 25000 out of 250000 steps  (10%)
[11:36:50] Timered checkpoint triggered.
[11:51:51] Timered checkpoint triggered.
[11:53:04] Writing local files
[11:53:04] Completed 27500 out of 250000 steps  (11%)
[12:08:05] Timered checkpoint triggered.
[12:23:06] Timered checkpoint triggered.
[12:24:24] Writing local files
[12:24:24] Completed 30000 out of 250000 steps  (12%)
[12:39:25] Timered checkpoint triggered.
[12:54:24] Timered checkpoint triggered.
[12:56:01] Writing local files
[12:56:01] Completed 32500 out of 250000 steps  (13%)
[13:11:02] Timered checkpoint triggered.
[13:26:03] Timered checkpoint triggered.
[13:32:23] Writing local files
[13:32:23] Completed 35000 out of 250000 steps  (14%)
[13:47:22] Timered checkpoint triggered.
[14:02:23] Timered checkpoint triggered.
[14:04:57] Writing local files
[14:04:57] Completed 37500 out of 250000 steps  (15%)
[14:19:57] Timered checkpoint triggered.
[14:34:58] Timered checkpoint triggered.
[14:36:29] Writing local files
[14:36:29] Completed 40000 out of 250000 steps  (16%)
[14:51:29] Timered checkpoint triggered.
[15:03:37] - Autosending finished units...
[15:03:37] Trying to send all finished work units
[15:03:37] + No unsent completed units remaining.
[15:03:37] - Autosend completed
[15:06:30] Timered checkpoint triggered.
[15:08:05] Writing local files
[15:08:05] Completed 42500 out of 250000 steps  (17%)
[15:23:05] Timered checkpoint triggered.
[15:38:06] Timered checkpoint triggered.
[15:39:42] Writing local files
[15:39:42] Completed 45000 out of 250000 steps  (18%)
[15:54:43] Timered checkpoint triggered.
[16:09:44] Timered checkpoint triggered.
[16:11:21] Writing local files
[16:11:21] Completed 47500 out of 250000 steps  (19%)
[16:26:22] Timered checkpoint triggered.
[16:41:23] Timered checkpoint triggered.
[16:43:05] Writing local files
[16:43:05] Completed 50000 out of 250000 steps  (20%)
[16:58:06] Timered checkpoint triggered.
[17:13:06] Timered checkpoint triggered.
[17:14:49] Writing local files
[17:14:49] Completed 52500 out of 250000 steps  (21%)
[17:29:50] Timered checkpoint triggered.
[17:44:50] Timered checkpoint triggered.
[17:46:35] Writing local files
[17:46:35] Completed 55000 out of 250000 steps  (22%)
[18:01:36] Timered checkpoint triggered.
[18:16:37] Timered checkpoint triggered.
[18:18:24] Writing local files
[18:18:24] Completed 57500 out of 250000 steps  (23%)
[18:33:25] Timered checkpoint triggered.
[18:48:25] Timered checkpoint triggered.
[18:50:15] Writing local files
[18:50:15] Completed 60000 out of 250000 steps  (24%)
[19:05:16] Timered checkpoint triggered.
[19:20:16] Timered checkpoint triggered.
[19:22:06] Writing local files
[19:22:06] Completed 62500 out of 250000 steps  (25%)
[19:37:07] Timered checkpoint triggered.
[19:52:07] Timered checkpoint triggered.
[19:53:58] Writing local files
[19:53:58] Completed 65000 out of 250000 steps  (26%)
[20:08:59] Timered checkpoint triggered.
[20:24:00] Timered checkpoint triggered.
[20:25:52] Writing local files
[20:25:52] Completed 67500 out of 250000 steps  (27%)
[20:40:52] Timered checkpoint triggered.
[20:55:53] Timered checkpoint triggered.
[20:57:54] Writing local files
[20:57:54] Completed 70000 out of 250000 steps  (28%)
[21:03:37] - Autosending finished units...
[21:03:37] Trying to send all finished work units
[21:03:37] + No unsent completed units remaining.
[21:03:37] - Autosend completed
[21:12:55] Timered checkpoint triggered.
[21:27:56] Timered checkpoint triggered.
[21:38:53] Writing local files
[21:38:53] Completed 72500 out of 250000 steps  (29%)
[21:53:54] Timered checkpoint triggered.
[22:08:55] Timered checkpoint triggered.
[22:10:50] Writing local files
[22:10:50] Completed 75000 out of 250000 steps  (30%)
[22:25:51] Timered checkpoint triggered.
[22:40:52] Timered checkpoint triggered.
[22:42:48] Writing local files
[22:42:48] Completed 77500 out of 250000 steps  (31%)
[22:57:49] Timered checkpoint triggered.
[23:12:50] Timered checkpoint triggered.
[23:14:50] Writing local files
[23:14:50] Completed 80000 out of 250000 steps  (32%)
[23:29:51] Timered checkpoint triggered.
[23:44:52] Timered checkpoint triggered.
[23:46:49] Writing local files
[23:46:50] Completed 82500 out of 250000 steps  (33%)
[00:01:50] Timered checkpoint triggered.
[00:16:25] ***** Got a SIGTERM signal (15)
[00:16:25] Killing all core threads

Folding@Home Client Shutdown.

Note: Please read the license agreement (fah6 -license). Further 
use of this software requires that you have read and accepted this agreement.



--- Opening Log file [September 17 01:58:51] 


# Linux Console Edition #######################################################
###############################################################################

                       Folding@Home Client Version 6.02

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: /home/folding/fah
Executable: ./fah6
Arguments: -verbosity 9 

[01:58:51] - Ask before connecting: No
[01:58:51] - User name: chrisretusn (Team 2291)
[01:58:51] - User ID: xxx
[01:58:51] - Machine ID: 1
[01:58:51] 
[01:58:51] Loaded queue successfully.
[01:58:51] 
[01:58:51] + Processing work unit
[01:58:51] Core required: FahCore_78.exe
[01:58:51] Core found.
[01:58:51] - Autosending finished units...
[01:58:51] Trying to send all finished work units
[01:58:51] + No unsent completed units remaining.
[01:58:51] - Autosend completed
[01:58:51] Working on Unit 09 [September 17 01:58:51]
[01:58:51] + Working ...
[01:58:51] - Calling './FahCore_78.exe -dir work/ -suffix 09 -checkpoint 15 -verbose -lifeline 1428 -version 602'

[01:58:52] 
[01:58:52] *------------------------------*
[01:58:52] Folding@Home Gromacs Core
[01:58:52] Version 1.90 (March 8, 2006)
[01:58:52] 
[01:58:52] Preparing to commence simulation
[01:58:52] - Looking at optimizations...
[01:58:52] - Files status OK
[01:58:53] - Expanded 766417 -> 4777964 (decompressed 623.4 percent)
[01:58:53] 
[01:58:53] Project: 11278 (Run 1, Clone 26, Gen 0)
[01:58:53] 
[01:58:53] Assembly optimizations on if available.
[01:58:53] Entering M.D.

  Gromacs is Copyright (c) 1991-2003, University of Groningen, The Netherlands
        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[01:59:14] (Starting from checkpoint)
[01:59:14] Protein: ALZHEIMERS DISEASE AMYLOID
[01:59:14] 
[01:59:14] Writing local files
[01:59:49] Completed 83670 out of 250000 steps  (33%)
[01:59:49] Extra SSE boost OK.
[02:14:50] Timered checkpoint triggered.
[02:17:04] Writing local files
[02:17:04] Completed 85000 out of 250000 steps  (34%)
[02:32:05] Timered checkpoint triggered.
[02:47:06] Timered checkpoint triggered.
[02:49:47] Writing local files
[02:49:47] Completed 87500 out of 250000 steps  (35%)
[03:04:48] Timered checkpoint triggered.
[03:19:48] Timered checkpoint triggered.
[03:28:33] Writing local files
[03:28:33] Completed 90000 out of 250000 steps  (36%)
[03:43:33] Timered checkpoint triggered.
[03:58:34] Timered checkpoint triggered.
[04:00:57] Writing local files
[04:00:57] Completed 92500 out of 250000 steps  (37%)
[04:15:58] Timered checkpoint triggered.
[04:30:59] Timered checkpoint triggered.
[04:33:23] Writing local files
[04:33:23] Completed 95000 out of 250000 steps  (38%)
[04:48:23] Timered checkpoint triggered.
[05:03:23] Timered checkpoint triggered.
[05:05:49] Writing local files
[05:05:49] Completed 97500 out of 250000 steps  (39%)
[05:20:49] Timered checkpoint triggered.
[05:35:49] Timered checkpoint triggered.
[05:38:16] Writing local files
[05:38:16] Completed 100000 out of 250000 steps  (40%)
[05:53:16] Timered checkpoint triggered.
[06:08:16] Timered checkpoint triggered.
[06:10:45] Writing local files
[06:10:45] Completed 102500 out of 250000 steps  (41%)
[06:25:45] Timered checkpoint triggered.
[06:40:45] Timered checkpoint triggered.
[06:43:15] Writing local files
[06:43:16] Completed 105000 out of 250000 steps  (42%)
[06:58:15] Timered checkpoint triggered.
[07:13:15] Timered checkpoint triggered.
[07:15:43] Writing local files
[07:15:43] Completed 107500 out of 250000 steps  (43%)
[07:30:43] Timered checkpoint triggered.
[07:45:43] Timered checkpoint triggered.
[07:48:12] Writing local files
[07:48:12] Completed 110000 out of 250000 steps  (44%)
[07:58:51] - Autosending finished units...
[07:58:51] Trying to send all finished work units
[07:58:51] + No unsent completed units remaining.
[07:58:51] - Autosend completed
[08:03:13] Timered checkpoint triggered.
[08:18:13] Timered checkpoint triggered.
[08:20:46] Writing local files
[08:20:46] Completed 112500 out of 250000 steps  (45%)
[08:35:47] Timered checkpoint triggered.
[08:50:46] Timered checkpoint triggered.
[08:53:20] Writing local files
[08:53:20] Completed 115000 out of 250000 steps  (46%)
[09:08:20] Timered checkpoint triggered.
[09:23:20] Timered checkpoint triggered.
[09:25:52] Writing local files
[09:25:52] Completed 117500 out of 250000 steps  (47%)
[09:40:53] Timered checkpoint triggered.
[09:55:52] Timered checkpoint triggered.
[09:58:25] Writing local files
[09:58:25] Completed 120000 out of 250000 steps  (48%)
[10:13:25] Timered checkpoint triggered.
[10:28:25] Timered checkpoint triggered.
[10:30:59] Writing local files
[10:30:59] Completed 122500 out of 250000 steps  (49%)
[10:45:59] Timered checkpoint triggered.
[11:00:59] Timered checkpoint triggered.
[11:03:34] Writing local files
[11:03:34] Completed 125000 out of 250000 steps  (50%)
[11:18:35] Timered checkpoint triggered.
[11:33:34] Timered checkpoint triggered.
[11:36:11] Writing local files
[11:36:11] Completed 127500 out of 250000 steps  (51%)
[11:51:11] Timered checkpoint triggered.
[12:06:11] Timered checkpoint triggered.
[12:08:47] Writing local files
[12:08:47] Completed 130000 out of 250000 steps  (52%)
[12:23:47] Timered checkpoint triggered.
[12:38:47] Timered checkpoint triggered.
[12:41:23] Writing local files
[12:41:23] Completed 132500 out of 250000 steps  (53%)
[12:56:23] Timered checkpoint triggered.
[13:11:24] Timered checkpoint triggered.
[13:13:57] Writing local files
[13:13:57] Completed 135000 out of 250000 steps  (54%)
[13:28:57] Timered checkpoint triggered.
[13:43:58] Timered checkpoint triggered.
[13:46:33] Writing local files
[13:46:33] Completed 137500 out of 250000 steps  (55%)
[13:58:51] - Autosending finished units...
[13:58:51] Trying to send all finished work units
[13:58:51] + No unsent completed units remaining.
[13:58:51] - Autosend completed
[14:01:32] Timered checkpoint triggered.
[14:16:33] Timered checkpoint triggered.
[14:19:05] Writing local files
[14:19:05] Completed 140000 out of 250000 steps  (56%)
[14:34:05] Timered checkpoint triggered.
[14:49:05] Timered checkpoint triggered.
[14:51:39] Writing local files
[14:51:39] Completed 142500 out of 250000 steps  (57%)
[15:06:39] Timered checkpoint triggered.
[15:21:40] Timered checkpoint triggered.
[15:24:13] Writing local files
[15:24:13] Completed 145000 out of 250000 steps  (58%)
[15:39:14] Timered checkpoint triggered.
[15:54:15] Timered checkpoint triggered.
[15:56:50] Writing local files
[15:56:50] Completed 147500 out of 250000 steps  (59%)
[16:11:50] Timered checkpoint triggered.
[16:26:50] Timered checkpoint triggered.
[16:29:25] Writing local files
[16:29:25] Completed 150000 out of 250000 steps  (60%)
[16:44:26] Timered checkpoint triggered.
[16:59:25] Timered checkpoint triggered.
[17:02:00] Writing local files
[17:02:00] Completed 152500 out of 250000 steps  (61%)
[17:17:00] Timered checkpoint triggered.
[17:32:00] Timered checkpoint triggered.
[17:34:35] Writing local files
[17:34:36] Completed 155000 out of 250000 steps  (62%)
[17:49:36] Timered checkpoint triggered.
[18:04:35] Timered checkpoint triggered.
[18:07:12] Writing local files
[18:07:12] Completed 157500 out of 250000 steps  (63%)
[18:22:12] Timered checkpoint triggered.
[18:37:12] Timered checkpoint triggered.
[18:39:50] Writing local files
[18:39:50] Completed 160000 out of 250000 steps  (64%)
[18:54:50] Timered checkpoint triggered.
[19:09:50] Timered checkpoint triggered.
[19:12:26] Writing local files
[19:12:26] Completed 162500 out of 250000 steps  (65%)
[19:27:26] Timered checkpoint triggered.
[19:42:26] Timered checkpoint triggered.
[19:45:04] Writing local files
[19:45:04] Completed 165000 out of 250000 steps  (66%)
[19:58:51] - Autosending finished units...
[19:58:51] Trying to send all finished work units
[19:58:51] + No unsent completed units remaining.
[19:58:51] - Autosend completed
[20:00:04] Timered checkpoint triggered.
[20:15:04] Timered checkpoint triggered.
[20:17:39] Writing local files
[20:17:39] Completed 167500 out of 250000 steps  (67%)
[20:32:40] Timered checkpoint triggered.
[20:47:39] Timered checkpoint triggered.
[20:50:29] Writing local files
[20:50:29] Completed 170000 out of 250000 steps  (68%)
[21:05:30] Timered checkpoint triggered.
[21:20:29] Timered checkpoint triggered.
[21:23:09] Writing local files
[21:23:09] Completed 172500 out of 250000 steps  (69%)
[21:38:09] Timered checkpoint triggered.
[21:53:09] Timered checkpoint triggered.
[21:55:50] Writing local files
[21:55:50] Completed 175000 out of 250000 steps  (70%)
[22:10:50] Timered checkpoint triggered.
[22:25:50] Timered checkpoint triggered.
[22:28:27] Writing local files
[22:28:27] Completed 177500 out of 250000 steps  (71%)
[22:43:27] Timered checkpoint triggered.
[22:58:27] Timered checkpoint triggered.
[23:01:06] Writing local files
[23:01:06] Completed 180000 out of 250000 steps  (72%)
[23:16:07] Timered checkpoint triggered.
[23:31:06] Timered checkpoint triggered.
[23:33:46] Writing local files
[23:33:46] Completed 182500 out of 250000 steps  (73%)
[23:48:46] Timered checkpoint triggered.
[00:03:46] Timered checkpoint triggered.
[00:06:26] Writing local files
[00:06:26] Completed 185000 out of 250000 steps  (74%)
[00:21:25] Timered checkpoint triggered.
[00:36:26] Timered checkpoint triggered.
[00:39:05] Writing local files
[00:39:05] Completed 187500 out of 250000 steps  (75%)
[00:54:05] Timered checkpoint triggered.
[01:09:05] Timered checkpoint triggered.
[01:11:46] Writing local files
[01:11:46] Completed 190000 out of 250000 steps  (76%)
[01:26:46] Timered checkpoint triggered.
[01:41:47] Timered checkpoint triggered.
[01:44:25] Writing local files
[01:44:25] Completed 192500 out of 250000 steps  (77%)
[01:58:51] - Autosending finished units...
[01:58:51] Trying to send all finished work units
[01:58:51] + No unsent completed units remaining.
[01:58:51] - Autosend completed
[01:59:24] Timered checkpoint triggered.
[02:14:25] Timered checkpoint triggered.
[02:17:04] Writing local files
[02:17:04] Completed 195000 out of 250000 steps  (78%)
[02:32:05] Timered checkpoint triggered.
[02:47:06] Timered checkpoint triggered.
[02:49:40] Writing local files
[02:49:40] Completed 197500 out of 250000 steps  (79%)
[03:04:40] Timered checkpoint triggered.
[03:19:40] Timered checkpoint triggered.
[03:22:17] Writing local files
[03:22:17] Completed 200000 out of 250000 steps  (80%)
[03:37:18] Timered checkpoint triggered.
[03:52:18] Timered checkpoint triggered.
[03:54:52] Writing local files
[03:54:53] Completed 202500 out of 250000 steps  (81%)
[04:09:53] Timered checkpoint triggered.
[04:24:53] Timered checkpoint triggered.
[04:27:29] Writing local files
[04:27:30] Completed 205000 out of 250000 steps  (82%)
[04:42:30] Timered checkpoint triggered.
[04:57:30] Timered checkpoint triggered.
[05:00:07] Writing local files
[05:00:08] Completed 207500 out of 250000 steps  (83%)
[05:15:08] Timered checkpoint triggered.
[05:30:08] Timered checkpoint triggered.
[05:32:46] Writing local files
[05:32:46] Completed 210000 out of 250000 steps  (84%)
[05:47:47] Timered checkpoint triggered.
[06:02:46] Timered checkpoint triggered.
[06:05:24] Writing local files
[06:05:25] Completed 212500 out of 250000 steps  (85%)
[06:20:25] Timered checkpoint triggered.
[06:35:24] Timered checkpoint triggered.
[06:38:07] Writing local files
[06:38:07] Completed 215000 out of 250000 steps  (86%)
[06:46:40] ***** Got a SIGTERM signal (15)
[06:46:40] Killing all core threads

Folding@Home Client Shutdown.
[06:46:40] 
[06:46:40] Folding@home Core Shutdown: INTERRUPTED

Note: Please read the license agreement (fah6 -license). Further 
use of this software requires that you have read and accepted this agreement.



--- Opening Log file [September 18 06:48:17] 


# Linux Console Edition #######################################################
###############################################################################

                       Folding@Home Client Version 6.02

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: /home/folding/fah
Executable: ./fah6
Arguments: -verbosity 9 

[06:48:17] - Ask before connecting: No
[06:48:17] - User name: chrisretusn (Team 2291)
[06:48:17] - User ID: xxx
[06:48:17] - Machine ID: 1
[06:48:17] 
[06:48:18] Loaded queue successfully.
[06:48:18] 
[06:48:18] + Processing work unit
[06:48:18] Core required: FahCore_78.exe
[06:48:18] Core found.
[06:48:18] - Autosending finished units...
[06:48:18] Trying to send all finished work units
[06:48:18] + No unsent completed units remaining.
[06:48:18] - Autosend completed
[06:48:18] Working on Unit 09 [September 18 06:48:18]
[06:48:18] + Working ...
[06:48:18] - Calling './FahCore_78.exe -dir work/ -suffix 09 -checkpoint 15 -verbose -lifeline 1427 -version 602'

[06:48:18] 
[06:48:18] *------------------------------*
[06:48:18] Folding@Home Gromacs Core
[06:48:18] Version 1.90 (March 8, 2006)
[06:48:18] 
[06:48:18] Preparing to commence simulation
[06:48:18] - Looking at optimizations...
[06:48:18] - Files status OK
[06:48:19] - Expanded 766417 -> 4777964 (decompressed 623.4 percent)
[06:48:19] 
[06:48:19] Project: 11278 (Run 1, Clone 26, Gen 0)
[06:48:19] 
[06:48:19] Assembly optimizations on if available.
[06:48:19] Entering M.D.

  Gromacs is Copyright (c) 1991-2003, University of Groningen, The Netherlands
        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[06:48:40] (Starting from checkpoint)
[06:48:40] Protein: ALZHEIMERS DISEASE AMYLOID
[06:48:40] 
[06:48:40] Writing local files
[06:49:15] Completed 215000 out of 250000 steps  (86%)
[06:49:15] Extra SSE boost OK.
[07:04:17] Timered checkpoint triggered.
[07:19:17] Timered checkpoint triggered.
[07:22:06] Writing local files
[07:22:06] Completed 217500 out of 250000 steps  (87%)
[07:37:07] Timered checkpoint triggered.
[07:52:06] Timered checkpoint triggered.
[07:54:51] Writing local files
[07:54:52] Completed 220000 out of 250000 steps  (88%)
[08:09:53] Timered checkpoint triggered.
[08:24:52] Timered checkpoint triggered.
[08:27:40] Writing local files
[08:27:41] Completed 222500 out of 250000 steps  (89%)
[08:42:41] Timered checkpoint triggered.
[08:57:42] Timered checkpoint triggered.
[09:00:25] Writing local files
[09:00:25] Completed 225000 out of 250000 steps  (90%)
[09:15:25] Timered checkpoint triggered.
[09:30:26] Timered checkpoint triggered.
[09:33:11] Writing local files
[09:33:11] Completed 227500 out of 250000 steps  (91%)
[09:48:11] Timered checkpoint triggered.
[10:03:11] Timered checkpoint triggered.
[10:05:55] Writing local files
[10:05:55] Completed 230000 out of 250000 steps  (92%)
[10:20:56] Timered checkpoint triggered.
[10:35:56] Timered checkpoint triggered.
[10:38:40] Writing local files
[10:38:41] Completed 232500 out of 250000 steps  (93%)
[10:53:41] Timered checkpoint triggered.
[11:08:41] Timered checkpoint triggered.
[11:11:24] Writing local files
[11:11:24] Completed 235000 out of 250000 steps  (94%)
[11:26:24] Timered checkpoint triggered.
[11:41:25] Timered checkpoint triggered.
[11:44:10] Writing local files
[11:44:10] Completed 237500 out of 250000 steps  (95%)
[11:59:11] Timered checkpoint triggered.
[12:14:11] Timered checkpoint triggered.
[12:16:54] Writing local files
[12:16:55] Completed 240000 out of 250000 steps  (96%)
[12:31:56] Timered checkpoint triggered.
[12:46:55] Timered checkpoint triggered.
[12:48:18] - Autosending finished units...
[12:48:18] Trying to send all finished work units
[12:48:18] + No unsent completed units remaining.
[12:48:18] - Autosend completed
[12:49:41] Writing local files
[12:49:41] Completed 242500 out of 250000 steps  (97%)
[13:04:42] Timered checkpoint triggered.
[13:19:42] Timered checkpoint triggered.
[13:22:25] Writing local files
[13:22:25] Completed 245000 out of 250000 steps  (98%)
[13:37:25] Timered checkpoint triggered.
[13:52:26] Timered checkpoint triggered.
[13:55:09] Writing local files
[13:55:09] Completed 247500 out of 250000 steps  (99%)
[14:10:09] Timered checkpoint triggered.
[14:25:10] Timered checkpoint triggered.
[14:27:50] Writing local files
[14:27:50] Completed 250000 out of 250000 steps  (100%)

Posted: **Sun Sep 19, 2010 11:51 am**

On the off chance you might what to see the log(s) from the start of Project: 11278 (Run 1, Clone 26, Gen 0). This includes the one that failed and the one that completed. Also included is the current running WU, Project: 11277 (Run 6, Clone 65, Gen 1) to present.

Code: Select all

[04:57:04] - Preparing to get new work unit...
[04:57:04] + Attempting to get work packet
[04:57:04] - Will indicate memory of 1008 MB
[04:57:04] - Connecting to assignment server
[04:57:04] Connecting to http://assign.stanford.edu:8080/
[04:57:05] Posted data.
[04:57:05] Initial: 43AB; - Successful: assigned to (171.67.108.33).
[04:57:05] + News From Folding@Home: Welcome to Folding@Home
[04:57:06] Loaded queue successfully.
[04:57:06] Connecting to http://171.67.108.33:8080/
[04:57:08] Posted data.
[04:57:08] Initial: 0000; - Receiving payload (expected size: 766929)
[04:57:22] - Downloaded at ~53 kB/s
[04:57:22] - Averaged speed for that direction ~51 kB/s
[04:57:22] + Received work.
[04:57:22] Trying to send all finished work units
[04:57:22] + No unsent completed units remaining.
[04:57:22] + Closed connections
[04:57:22] 
[04:57:22] + Processing work unit
[04:57:22] Core required: FahCore_78.exe
[04:57:22] Core found.
[04:57:22] Working on Unit 08 [September 15 04:57:22]
[04:57:22] + Working ...
[04:57:22] - Calling './FahCore_78.exe -dir work/ -suffix 08 -checkpoint 15 -verbose -lifeline 1424 -version 602'

[04:57:22] 
[04:57:22] *------------------------------*
[04:57:22] Folding@Home Gromacs Core
[04:57:22] Version 1.90 (March 8, 2006)
[04:57:22] 
[04:57:22] Preparing to commence simulation
[04:57:22] - Looking at optimizations...
[04:57:22] - Created dyn
[04:57:22] - Files status OK
[04:57:23] - Expanded 766417 -> 4777964 (decompressed 623.4 percent)
[04:57:23] - Starting from initial work packet
[04:57:23] 
[04:57:23] Project: 11278 (Run 1, Clone 26, Gen 0)
[04:57:23] 
[04:57:23] Assembly optimizations on if available.
[04:57:23] Entering M.D.

  Gromacs is Copyright (c) 1991-2003, University of Groningen, The Netherlands
        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[04:57:29] Protein: ALZHEIMERS DISEASE AMYLOID
[04:57:29] 
[04:57:29] Writing local files
[04:58:05] Extra SSE boost OK.
[04:58:05] Writing local files
[04:58:06] Completed 0 out of 250000 steps  (0%)
[05:13:05] Timered checkpoint triggered.
[05:28:05] Timered checkpoint triggered.
[05:28:43] Writing local files
[05:28:43] Completed 2500 out of 250000 steps  (1%)
[05:43:43] Timered checkpoint triggered.
[05:58:43] Timered checkpoint triggered.
[05:59:33] Writing local files
[05:59:33] Completed 5000 out of 250000 steps  (2%)
[06:14:33] Timered checkpoint triggered.
[06:29:34] Timered checkpoint triggered.
[06:30:28] Writing local files
[06:30:28] Completed 7500 out of 250000 steps  (3%)
[06:45:28] Timered checkpoint triggered.
[07:00:28] Timered checkpoint triggered.
[07:01:24] Writing local files
[07:01:24] Completed 10000 out of 250000 steps  (4%)
[07:16:24] Timered checkpoint triggered.
[07:31:25] Timered checkpoint triggered.
[07:32:28] Writing local files
[07:32:28] Completed 12500 out of 250000 steps  (5%)
[07:47:27] Timered checkpoint triggered.
[08:02:27] Timered checkpoint triggered.
[08:03:31] Writing local files
[08:03:31] Completed 15000 out of 250000 steps  (6%)
[08:18:31] Timered checkpoint triggered.
[08:33:32] Timered checkpoint triggered.
[08:34:44] Writing local files
[08:34:44] Completed 17500 out of 250000 steps  (7%)
[08:49:43] Timered checkpoint triggered.
[09:03:37] - Autosending finished units...
[09:03:37] Trying to send all finished work units
[09:03:37] + No unsent completed units remaining.
[09:03:37] - Autosend completed
[09:04:44] Timered checkpoint triggered.
[09:05:54] Writing local files
[09:05:54] Completed 20000 out of 250000 steps  (8%)
[09:20:55] Timered checkpoint triggered.
[09:35:56] Timered checkpoint triggered.
[09:37:28] Writing local files
[09:37:28] Completed 22500 out of 250000 steps  (9%)
[09:52:29] Timered checkpoint triggered.
[10:08:14] Timered checkpoint triggered.
[10:14:33] Writing local files
[10:14:34] Completed 25000 out of 250000 steps  (10%)
[10:29:33] Timered checkpoint triggered.
[10:44:34] Timered checkpoint triggered.
[10:45:56] Writing local files
[10:45:56] Completed 27500 out of 250000 steps  (11%)
[11:00:55] Timered checkpoint triggered.
[11:15:55] Timered checkpoint triggered.
[11:17:21] Writing local files
[11:17:21] Completed 30000 out of 250000 steps  (12%)
[11:32:21] Timered checkpoint triggered.
[11:47:21] Timered checkpoint triggered.
[11:48:51] Writing local files
[11:48:51] Completed 32500 out of 250000 steps  (13%)
[12:03:51] Timered checkpoint triggered.
[12:18:51] Timered checkpoint triggered.
[12:20:24] Writing local files
[12:20:24] Completed 35000 out of 250000 steps  (14%)
[12:35:25] Timered checkpoint triggered.
[12:50:24] Timered checkpoint triggered.
[12:52:20] Writing local files
[12:52:20] Completed 37500 out of 250000 steps  (15%)
[13:07:20] Timered checkpoint triggered.
[13:22:20] Timered checkpoint triggered.
[13:23:59] Writing local files
[13:23:59] Completed 40000 out of 250000 steps  (16%)
[13:39:00] Timered checkpoint triggered.
[13:53:59] Timered checkpoint triggered.
[13:55:41] Writing local files
[13:55:41] Completed 42500 out of 250000 steps  (17%)
[14:10:42] Timered checkpoint triggered.
[14:25:41] Timered checkpoint triggered.
[14:27:25] Writing local files
[14:27:25] Completed 45000 out of 250000 steps  (18%)
[14:42:25] Timered checkpoint triggered.
[14:57:25] Timered checkpoint triggered.
[14:59:11] Writing local files
[14:59:11] Completed 47500 out of 250000 steps  (19%)
[15:03:37] - Autosending finished units...
[15:03:37] Trying to send all finished work units
[15:03:37] + No unsent completed units remaining.
[15:03:37] - Autosend completed
[15:14:11] Timered checkpoint triggered.
[15:29:11] Timered checkpoint triggered.
[15:31:03] Writing local files
[15:31:03] Completed 50000 out of 250000 steps  (20%)
[15:46:03] Timered checkpoint triggered.
[16:01:04] Timered checkpoint triggered.
[16:02:53] Writing local files
[16:02:53] Completed 52500 out of 250000 steps  (21%)
[16:17:54] Timered checkpoint triggered.
[16:32:54] Timered checkpoint triggered.
[16:34:46] Writing local files
[16:34:46] Completed 55000 out of 250000 steps  (22%)
[16:49:46] Timered checkpoint triggered.
[17:04:48] Timered checkpoint triggered.
[17:06:44] Writing local files
[17:06:44] Completed 57500 out of 250000 steps  (23%)
[17:21:45] Timered checkpoint triggered.
[17:36:45] Timered checkpoint triggered.
[17:38:42] Writing local files
[17:38:43] Completed 60000 out of 250000 steps  (24%)
[17:53:42] Timered checkpoint triggered.
[18:08:42] Timered checkpoint triggered.
[18:10:40] Writing local files
[18:10:40] Completed 62500 out of 250000 steps  (25%)
[18:25:40] Timered checkpoint triggered.
[18:40:40] Timered checkpoint triggered.
[18:42:40] Writing local files
[18:42:40] Completed 65000 out of 250000 steps  (26%)
[18:57:40] Timered checkpoint triggered.
[19:12:40] Timered checkpoint triggered.
[19:14:41] Writing local files
[19:14:41] Completed 67500 out of 250000 steps  (27%)
[19:29:41] Timered checkpoint triggered.
[19:44:41] Timered checkpoint triggered.
[19:46:46] Writing local files
[19:46:46] Completed 70000 out of 250000 steps  (28%)
[20:01:45] Timered checkpoint triggered.
[20:16:45] Timered checkpoint triggered.
[20:18:51] Writing local files
[20:18:51] Completed 72500 out of 250000 steps  (29%)
[20:33:51] Timered checkpoint triggered.
[20:48:52] Timered checkpoint triggered.
[20:50:58] Writing local files
[20:50:58] Completed 75000 out of 250000 steps  (30%)
[21:03:37] - Autosending finished units...
[21:03:37] Trying to send all finished work units
[21:03:37] + No unsent completed units remaining.
[21:03:37] - Autosend completed
[21:05:58] Timered checkpoint triggered.
[21:20:59] Timered checkpoint triggered.
[21:23:03] Writing local files
[21:23:03] Completed 77500 out of 250000 steps  (31%)
[21:38:02] Timered checkpoint triggered.
[21:53:03] Timered checkpoint triggered.
[21:55:12] Writing local files
[21:55:12] Completed 80000 out of 250000 steps  (32%)
[22:10:11] Timered checkpoint triggered.
[22:25:12] Timered checkpoint triggered.
[22:27:18] Writing local files
[22:27:18] Completed 82500 out of 250000 steps  (33%)
[22:42:18] Timered checkpoint triggered.
[22:57:19] Timered checkpoint triggered.
[22:59:28] Writing local files
[22:59:28] Completed 85000 out of 250000 steps  (34%)
[23:14:28] Timered checkpoint triggered.
[23:29:29] Timered checkpoint triggered.
[23:31:40] Writing local files
[23:31:40] Completed 87500 out of 250000 steps  (35%)
[23:46:40] Timered checkpoint triggered.
[00:01:41] Timered checkpoint triggered.
[00:03:51] Writing local files
[00:03:51] Completed 90000 out of 250000 steps  (36%)
[00:18:51] Timered checkpoint triggered.
[00:33:52] Timered checkpoint triggered.
[00:36:03] Writing local files
[00:36:03] Completed 92500 out of 250000 steps  (37%)
[00:51:04] Timered checkpoint triggered.
[01:06:04] Timered checkpoint triggered.
[01:08:14] Writing local files
[01:08:14] Completed 95000 out of 250000 steps  (38%)
[01:23:14] Timered checkpoint triggered.
[01:38:15] Timered checkpoint triggered.
[01:40:29] Writing local files
[01:40:29] Completed 97500 out of 250000 steps  (39%)
[01:55:28] Timered checkpoint triggered.
[02:10:29] Timered checkpoint triggered.
[02:12:44] Writing local files
[02:12:44] Completed 100000 out of 250000 steps  (40%)
[02:27:44] Timered checkpoint triggered.
[02:42:44] Timered checkpoint triggered.
[02:45:01] Writing local files
[02:45:01] Completed 102500 out of 250000 steps  (41%)
[03:00:01] Timered checkpoint triggered.
[03:03:37] - Autosending finished units...
[03:03:37] Trying to send all finished work units
[03:03:37] + No unsent completed units remaining.
[03:03:37] - Autosend completed
[03:15:01] Timered checkpoint triggered.
[03:17:17] Writing local files
[03:17:17] Completed 105000 out of 250000 steps  (42%)
[03:32:17] Timered checkpoint triggered.
[03:47:18] Timered checkpoint triggered.
[03:49:36] Writing local files
[03:49:36] Completed 107500 out of 250000 steps  (43%)
[04:04:35] Timered checkpoint triggered.
[04:19:36] Timered checkpoint triggered.
[04:21:57] Writing local files
[04:21:57] Completed 110000 out of 250000 steps  (44%)
[04:36:57] Timered checkpoint triggered.
[04:51:58] Timered checkpoint triggered.
[04:54:18] Writing local files
[04:54:18] Completed 112500 out of 250000 steps  (45%)
[05:09:19] Timered checkpoint triggered.
[05:24:20] Timered checkpoint triggered.
[05:26:40] Writing local files
[05:26:40] Completed 115000 out of 250000 steps  (46%)
[05:41:41] Timered checkpoint triggered.
[05:56:42] Timered checkpoint triggered.
[05:59:06] Writing local files
[05:59:06] Completed 117500 out of 250000 steps  (47%)
[06:10:38] CoreStatus = 0 (0)
[06:10:38] Client-core communications error: ERROR 0x0
[06:10:38] Deleting current work unit & continuing...
[06:11:14] Trying to send all finished work units
[06:11:14] + No unsent completed units remaining.
[06:11:14] - Preparing to get new work unit...
[06:11:14] + Attempting to get work packet
[06:11:14] - Will indicate memory of 1008 MB
[06:11:14] - Connecting to assignment server
[06:11:14] Connecting to http://assign.stanford.edu:8080/
[06:11:15] Posted data.
[06:11:15] Initial: 43AB; - Successful: assigned to (171.67.108.33).
[06:11:15] + News From Folding@Home: Welcome to Folding@Home
[06:11:15] Loaded queue successfully.
[06:11:15] Connecting to http://171.67.108.33:8080/
[06:11:17] Posted data.
[06:11:17] Initial: 0000; - Receiving payload (expected size: 766929)
[06:11:32] - Downloaded at ~49 kB/s
[06:11:32] - Averaged speed for that direction ~51 kB/s
[06:11:32] + Received work.
[06:11:32] + Closed connections
[06:11:37] 
[06:11:37] + Processing work unit
[06:11:37] Core required: FahCore_78.exe
[06:11:37] Core found.
[06:11:37] Working on Unit 09 [September 16 06:11:37]
[06:11:37] + Working ...
[06:11:37] - Calling './FahCore_78.exe -dir work/ -suffix 09 -checkpoint 15 -verbose -lifeline 1424 -version 602'

[06:11:37] 
[06:11:37] *------------------------------*
[06:11:37] Folding@Home Gromacs Core
[06:11:37] Version 1.90 (March 8, 2006)
[06:11:37] 
[06:11:37] Preparing to commence simulation
[06:11:37] - Looking at optimizations...
[06:11:37] - Created dyn
[06:11:37] - Files status OK
[06:11:37] - Expanded 766417 -> 4777964 (decompressed 623.4 percent)
[06:11:37] - Starting from initial work packet
[06:11:37] 
[06:11:37] Project: 11278 (Run 1, Clone 26, Gen 0)
[06:11:37] 
[06:11:37] Assembly optimizations on if available.
[06:11:37] Entering M.D.

  Gromacs is Copyright (c) 1991-2003, University of Groningen, The Netherlands
        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[06:11:44] Protein: ALZHEIMERS DISEASE AMYLOID
[06:11:44] 
[06:11:44] Writing local files
[06:12:19] Extra SSE boost OK.
[06:12:20] Writing local files
[06:12:20] Completed 0 out of 250000 steps  (0%)
[06:27:20] Timered checkpoint triggered.
[06:42:21] Timered checkpoint triggered.
[06:42:53] Writing local files
[06:42:53] Completed 2500 out of 250000 steps  (1%)
[06:57:53] Timered checkpoint triggered.
[07:12:54] Timered checkpoint triggered.
[07:13:37] Writing local files
[07:13:37] Completed 5000 out of 250000 steps  (2%)
[07:28:37] Timered checkpoint triggered.
[07:43:38] Timered checkpoint triggered.
[07:44:26] Writing local files
[07:44:26] Completed 7500 out of 250000 steps  (3%)
[07:59:27] Timered checkpoint triggered.
[08:14:28] Timered checkpoint triggered.
[08:15:17] Writing local files
[08:15:17] Completed 10000 out of 250000 steps  (4%)
[08:30:16] Timered checkpoint triggered.
[08:45:17] Timered checkpoint triggered.
[08:46:15] Writing local files
[08:46:15] Completed 12500 out of 250000 steps  (5%)
[09:01:14] Timered checkpoint triggered.
[09:03:37] - Autosending finished units...
[09:03:37] Trying to send all finished work units
[09:03:37] + No unsent completed units remaining.
[09:03:37] - Autosend completed
[09:16:14] Timered checkpoint triggered.
[09:17:12] Writing local files
[09:17:12] Completed 15000 out of 250000 steps  (6%)
[09:32:13] Timered checkpoint triggered.
[09:47:12] Timered checkpoint triggered.
[09:48:19] Writing local files
[09:48:19] Completed 17500 out of 250000 steps  (7%)
[10:03:20] Timered checkpoint triggered.
[10:18:19] Timered checkpoint triggered.
[10:19:24] Writing local files
[10:19:24] Completed 20000 out of 250000 steps  (8%)
[10:34:25] Timered checkpoint triggered.
[10:49:25] Timered checkpoint triggered.
[10:50:36] Writing local files
[10:50:36] Completed 22500 out of 250000 steps  (9%)
[11:05:37] Timered checkpoint triggered.
[11:20:37] Timered checkpoint triggered.
[11:21:49] Writing local files
[11:21:49] Completed 25000 out of 250000 steps  (10%)
[11:36:50] Timered checkpoint triggered.
[11:51:51] Timered checkpoint triggered.
[11:53:04] Writing local files
[11:53:04] Completed 27500 out of 250000 steps  (11%)
[12:08:05] Timered checkpoint triggered.
[12:23:06] Timered checkpoint triggered.
[12:24:24] Writing local files
[12:24:24] Completed 30000 out of 250000 steps  (12%)
[12:39:25] Timered checkpoint triggered.
[12:54:24] Timered checkpoint triggered.
[12:56:01] Writing local files
[12:56:01] Completed 32500 out of 250000 steps  (13%)
[13:11:02] Timered checkpoint triggered.
[13:26:03] Timered checkpoint triggered.
[13:32:23] Writing local files
[13:32:23] Completed 35000 out of 250000 steps  (14%)
[13:47:22] Timered checkpoint triggered.
[14:02:23] Timered checkpoint triggered.
[14:04:57] Writing local files
[14:04:57] Completed 37500 out of 250000 steps  (15%)
[14:19:57] Timered checkpoint triggered.
[14:34:58] Timered checkpoint triggered.
[14:36:29] Writing local files
[14:36:29] Completed 40000 out of 250000 steps  (16%)
[14:51:29] Timered checkpoint triggered.
[15:03:37] - Autosending finished units...
[15:03:37] Trying to send all finished work units
[15:03:37] + No unsent completed units remaining.
[15:03:37] - Autosend completed
[15:06:30] Timered checkpoint triggered.
[15:08:05] Writing local files
[15:08:05] Completed 42500 out of 250000 steps  (17%)
[15:23:05] Timered checkpoint triggered.
[15:38:06] Timered checkpoint triggered.
[15:39:42] Writing local files
[15:39:42] Completed 45000 out of 250000 steps  (18%)
[15:54:43] Timered checkpoint triggered.
[16:09:44] Timered checkpoint triggered.
[16:11:21] Writing local files
[16:11:21] Completed 47500 out of 250000 steps  (19%)
[16:26:22] Timered checkpoint triggered.
[16:41:23] Timered checkpoint triggered.
[16:43:05] Writing local files
[16:43:05] Completed 50000 out of 250000 steps  (20%)
[16:58:06] Timered checkpoint triggered.
[17:13:06] Timered checkpoint triggered.
[17:14:49] Writing local files
[17:14:49] Completed 52500 out of 250000 steps  (21%)
[17:29:50] Timered checkpoint triggered.
[17:44:50] Timered checkpoint triggered.
[17:46:35] Writing local files
[17:46:35] Completed 55000 out of 250000 steps  (22%)
[18:01:36] Timered checkpoint triggered.
[18:16:37] Timered checkpoint triggered.
[18:18:24] Writing local files
[18:18:24] Completed 57500 out of 250000 steps  (23%)
[18:33:25] Timered checkpoint triggered.
[18:48:25] Timered checkpoint triggered.
[18:50:15] Writing local files
[18:50:15] Completed 60000 out of 250000 steps  (24%)
[19:05:16] Timered checkpoint triggered.
[19:20:16] Timered checkpoint triggered.
[19:22:06] Writing local files
[19:22:06] Completed 62500 out of 250000 steps  (25%)
[19:37:07] Timered checkpoint triggered.
[19:52:07] Timered checkpoint triggered.
[19:53:58] Writing local files
[19:53:58] Completed 65000 out of 250000 steps  (26%)
[20:08:59] Timered checkpoint triggered.
[20:24:00] Timered checkpoint triggered.
[20:25:52] Writing local files
[20:25:52] Completed 67500 out of 250000 steps  (27%)
[20:40:52] Timered checkpoint triggered.
[20:55:53] Timered checkpoint triggered.
[20:57:54] Writing local files
[20:57:54] Completed 70000 out of 250000 steps  (28%)
[21:03:37] - Autosending finished units...
[21:03:37] Trying to send all finished work units
[21:03:37] + No unsent completed units remaining.
[21:03:37] - Autosend completed
[21:12:55] Timered checkpoint triggered.
[21:27:56] Timered checkpoint triggered.
[21:38:53] Writing local files
[21:38:53] Completed 72500 out of 250000 steps  (29%)
[21:53:54] Timered checkpoint triggered.
[22:08:55] Timered checkpoint triggered.
[22:10:50] Writing local files
[22:10:50] Completed 75000 out of 250000 steps  (30%)
[22:25:51] Timered checkpoint triggered.
[22:40:52] Timered checkpoint triggered.
[22:42:48] Writing local files
[22:42:48] Completed 77500 out of 250000 steps  (31%)
[22:57:49] Timered checkpoint triggered.
[23:12:50] Timered checkpoint triggered.
[23:14:50] Writing local files
[23:14:50] Completed 80000 out of 250000 steps  (32%)
[23:29:51] Timered checkpoint triggered.
[23:44:52] Timered checkpoint triggered.
[23:46:49] Writing local files
[23:46:50] Completed 82500 out of 250000 steps  (33%)
[00:01:50] Timered checkpoint triggered.
[00:16:25] ***** Got a SIGTERM signal (15)
[00:16:25] Killing all core threads

Folding@Home Client Shutdown.

Note: Please read the license agreement (fah6 -license). Further 
use of this software requires that you have read and accepted this agreement.



--- Opening Log file [September 17 01:58:51] 


# Linux Console Edition #######################################################
###############################################################################

                       Folding@Home Client Version 6.02

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: /home/folding/fah
Executable: ./fah6
Arguments: -verbosity 9 

[01:58:51] - Ask before connecting: No
[01:58:51] - User name: chrisretusn (Team 2291)
[01:58:51] - User ID: xx
[01:58:51] - Machine ID: 1
[01:58:51] 
[01:58:51] Loaded queue successfully.
[01:58:51] 
[01:58:51] + Processing work unit
[01:58:51] Core required: FahCore_78.exe
[01:58:51] Core found.
[01:58:51] - Autosending finished units...
[01:58:51] Trying to send all finished work units
[01:58:51] + No unsent completed units remaining.
[01:58:51] - Autosend completed
[01:58:51] Working on Unit 09 [September 17 01:58:51]
[01:58:51] + Working ...
[01:58:51] - Calling './FahCore_78.exe -dir work/ -suffix 09 -checkpoint 15 -verbose -lifeline 1428 -version 602'

[01:58:52] 
[01:58:52] *------------------------------*
[01:58:52] Folding@Home Gromacs Core
[01:58:52] Version 1.90 (March 8, 2006)
[01:58:52] 
[01:58:52] Preparing to commence simulation
[01:58:52] - Looking at optimizations...
[01:58:52] - Files status OK
[01:58:53] - Expanded 766417 -> 4777964 (decompressed 623.4 percent)
[01:58:53] 
[01:58:53] Project: 11278 (Run 1, Clone 26, Gen 0)
[01:58:53] 
[01:58:53] Assembly optimizations on if available.
[01:58:53] Entering M.D.

  Gromacs is Copyright (c) 1991-2003, University of Groningen, The Netherlands
        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[01:59:14] (Starting from checkpoint)
[01:59:14] Protein: ALZHEIMERS DISEASE AMYLOID
[01:59:14] 
[01:59:14] Writing local files
[01:59:49] Completed 83670 out of 250000 steps  (33%)
[01:59:49] Extra SSE boost OK.
[02:14:50] Timered checkpoint triggered.
[02:17:04] Writing local files
[02:17:04] Completed 85000 out of 250000 steps  (34%)
[02:32:05] Timered checkpoint triggered.
[02:47:06] Timered checkpoint triggered.
[02:49:47] Writing local files
[02:49:47] Completed 87500 out of 250000 steps  (35%)
[03:04:48] Timered checkpoint triggered.
[03:19:48] Timered checkpoint triggered.
[03:28:33] Writing local files
[03:28:33] Completed 90000 out of 250000 steps  (36%)
[03:43:33] Timered checkpoint triggered.
[03:58:34] Timered checkpoint triggered.
[04:00:57] Writing local files
[04:00:57] Completed 92500 out of 250000 steps  (37%)
[04:15:58] Timered checkpoint triggered.
[04:30:59] Timered checkpoint triggered.
[04:33:23] Writing local files
[04:33:23] Completed 95000 out of 250000 steps  (38%)
[04:48:23] Timered checkpoint triggered.
[05:03:23] Timered checkpoint triggered.
[05:05:49] Writing local files
[05:05:49] Completed 97500 out of 250000 steps  (39%)
[05:20:49] Timered checkpoint triggered.
[05:35:49] Timered checkpoint triggered.
[05:38:16] Writing local files
[05:38:16] Completed 100000 out of 250000 steps  (40%)
[05:53:16] Timered checkpoint triggered.
[06:08:16] Timered checkpoint triggered.
[06:10:45] Writing local files
[06:10:45] Completed 102500 out of 250000 steps  (41%)
[06:25:45] Timered checkpoint triggered.
[06:40:45] Timered checkpoint triggered.
[06:43:15] Writing local files
[06:43:16] Completed 105000 out of 250000 steps  (42%)
[06:58:15] Timered checkpoint triggered.
[07:13:15] Timered checkpoint triggered.
[07:15:43] Writing local files
[07:15:43] Completed 107500 out of 250000 steps  (43%)
[07:30:43] Timered checkpoint triggered.
[07:45:43] Timered checkpoint triggered.
[07:48:12] Writing local files
[07:48:12] Completed 110000 out of 250000 steps  (44%)
[07:58:51] - Autosending finished units...
[07:58:51] Trying to send all finished work units
[07:58:51] + No unsent completed units remaining.
[07:58:51] - Autosend completed
[08:03:13] Timered checkpoint triggered.
[08:18:13] Timered checkpoint triggered.
[08:20:46] Writing local files
[08:20:46] Completed 112500 out of 250000 steps  (45%)
[08:35:47] Timered checkpoint triggered.
[08:50:46] Timered checkpoint triggered.
[08:53:20] Writing local files
[08:53:20] Completed 115000 out of 250000 steps  (46%)
[09:08:20] Timered checkpoint triggered.
[09:23:20] Timered checkpoint triggered.
[09:25:52] Writing local files
[09:25:52] Completed 117500 out of 250000 steps  (47%)
[09:40:53] Timered checkpoint triggered.
[09:55:52] Timered checkpoint triggered.
[09:58:25] Writing local files
[09:58:25] Completed 120000 out of 250000 steps  (48%)
[10:13:25] Timered checkpoint triggered.
[10:28:25] Timered checkpoint triggered.
[10:30:59] Writing local files
[10:30:59] Completed 122500 out of 250000 steps  (49%)
[10:45:59] Timered checkpoint triggered.
[11:00:59] Timered checkpoint triggered.
[11:03:34] Writing local files
[11:03:34] Completed 125000 out of 250000 steps  (50%)
[11:18:35] Timered checkpoint triggered.
[11:33:34] Timered checkpoint triggered.
[11:36:11] Writing local files
[11:36:11] Completed 127500 out of 250000 steps  (51%)
[11:51:11] Timered checkpoint triggered.
[12:06:11] Timered checkpoint triggered.
[12:08:47] Writing local files
[12:08:47] Completed 130000 out of 250000 steps  (52%)
[12:23:47] Timered checkpoint triggered.
[12:38:47] Timered checkpoint triggered.
[12:41:23] Writing local files
[12:41:23] Completed 132500 out of 250000 steps  (53%)
[12:56:23] Timered checkpoint triggered.
[13:11:24] Timered checkpoint triggered.
[13:13:57] Writing local files
[13:13:57] Completed 135000 out of 250000 steps  (54%)
[13:28:57] Timered checkpoint triggered.
[13:43:58] Timered checkpoint triggered.
[13:46:33] Writing local files
[13:46:33] Completed 137500 out of 250000 steps  (55%)
[13:58:51] - Autosending finished units...
[13:58:51] Trying to send all finished work units
[13:58:51] + No unsent completed units remaining.
[13:58:51] - Autosend completed
[14:01:32] Timered checkpoint triggered.
[14:16:33] Timered checkpoint triggered.
[14:19:05] Writing local files
[14:19:05] Completed 140000 out of 250000 steps  (56%)
[14:34:05] Timered checkpoint triggered.
[14:49:05] Timered checkpoint triggered.
[14:51:39] Writing local files
[14:51:39] Completed 142500 out of 250000 steps  (57%)
[15:06:39] Timered checkpoint triggered.
[15:21:40] Timered checkpoint triggered.
[15:24:13] Writing local files
[15:24:13] Completed 145000 out of 250000 steps  (58%)
[15:39:14] Timered checkpoint triggered.
[15:54:15] Timered checkpoint triggered.
[15:56:50] Writing local files
[15:56:50] Completed 147500 out of 250000 steps  (59%)
[16:11:50] Timered checkpoint triggered.
[16:26:50] Timered checkpoint triggered.
[16:29:25] Writing local files
[16:29:25] Completed 150000 out of 250000 steps  (60%)
[16:44:26] Timered checkpoint triggered.
[16:59:25] Timered checkpoint triggered.
[17:02:00] Writing local files
[17:02:00] Completed 152500 out of 250000 steps  (61%)
[17:17:00] Timered checkpoint triggered.
[17:32:00] Timered checkpoint triggered.
[17:34:35] Writing local files
[17:34:36] Completed 155000 out of 250000 steps  (62%)
[17:49:36] Timered checkpoint triggered.
[18:04:35] Timered checkpoint triggered.
[18:07:12] Writing local files
[18:07:12] Completed 157500 out of 250000 steps  (63%)
[18:22:12] Timered checkpoint triggered.
[18:37:12] Timered checkpoint triggered.
[18:39:50] Writing local files
[18:39:50] Completed 160000 out of 250000 steps  (64%)
[18:54:50] Timered checkpoint triggered.
[19:09:50] Timered checkpoint triggered.
[19:12:26] Writing local files
[19:12:26] Completed 162500 out of 250000 steps  (65%)
[19:27:26] Timered checkpoint triggered.
[19:42:26] Timered checkpoint triggered.
[19:45:04] Writing local files
[19:45:04] Completed 165000 out of 250000 steps  (66%)
[19:58:51] - Autosending finished units...
[19:58:51] Trying to send all finished work units
[19:58:51] + No unsent completed units remaining.
[19:58:51] - Autosend completed
[20:00:04] Timered checkpoint triggered.
[20:15:04] Timered checkpoint triggered.
[20:17:39] Writing local files
[20:17:39] Completed 167500 out of 250000 steps  (67%)
[20:32:40] Timered checkpoint triggered.
[20:47:39] Timered checkpoint triggered.
[20:50:29] Writing local files
[20:50:29] Completed 170000 out of 250000 steps  (68%)
[21:05:30] Timered checkpoint triggered.
[21:20:29] Timered checkpoint triggered.
[21:23:09] Writing local files
[21:23:09] Completed 172500 out of 250000 steps  (69%)
[21:38:09] Timered checkpoint triggered.
[21:53:09] Timered checkpoint triggered.
[21:55:50] Writing local files
[21:55:50] Completed 175000 out of 250000 steps  (70%)
[22:10:50] Timered checkpoint triggered.
[22:25:50] Timered checkpoint triggered.
[22:28:27] Writing local files
[22:28:27] Completed 177500 out of 250000 steps  (71%)
[22:43:27] Timered checkpoint triggered.
[22:58:27] Timered checkpoint triggered.
[23:01:06] Writing local files
[23:01:06] Completed 180000 out of 250000 steps  (72%)
[23:16:07] Timered checkpoint triggered.
[23:31:06] Timered checkpoint triggered.
[23:33:46] Writing local files
[23:33:46] Completed 182500 out of 250000 steps  (73%)
[23:48:46] Timered checkpoint triggered.
[00:03:46] Timered checkpoint triggered.
[00:06:26] Writing local files
[00:06:26] Completed 185000 out of 250000 steps  (74%)
[00:21:25] Timered checkpoint triggered.
[00:36:26] Timered checkpoint triggered.
[00:39:05] Writing local files
[00:39:05] Completed 187500 out of 250000 steps  (75%)
[00:54:05] Timered checkpoint triggered.
[01:09:05] Timered checkpoint triggered.
[01:11:46] Writing local files
[01:11:46] Completed 190000 out of 250000 steps  (76%)
[01:26:46] Timered checkpoint triggered.
[01:41:47] Timered checkpoint triggered.
[01:44:25] Writing local files
[01:44:25] Completed 192500 out of 250000 steps  (77%)
[01:58:51] - Autosending finished units...
[01:58:51] Trying to send all finished work units
[01:58:51] + No unsent completed units remaining.
[01:58:51] - Autosend completed
[01:59:24] Timered checkpoint triggered.
[02:14:25] Timered checkpoint triggered.
[02:17:04] Writing local files
[02:17:04] Completed 195000 out of 250000 steps  (78%)
[02:32:05] Timered checkpoint triggered.
[02:47:06] Timered checkpoint triggered.
[02:49:40] Writing local files
[02:49:40] Completed 197500 out of 250000 steps  (79%)
[03:04:40] Timered checkpoint triggered.
[03:19:40] Timered checkpoint triggered.
[03:22:17] Writing local files
[03:22:17] Completed 200000 out of 250000 steps  (80%)
[03:37:18] Timered checkpoint triggered.
[03:52:18] Timered checkpoint triggered.
[03:54:52] Writing local files
[03:54:53] Completed 202500 out of 250000 steps  (81%)
[04:09:53] Timered checkpoint triggered.
[04:24:53] Timered checkpoint triggered.
[04:27:29] Writing local files
[04:27:30] Completed 205000 out of 250000 steps  (82%)
[04:42:30] Timered checkpoint triggered.
[04:57:30] Timered checkpoint triggered.
[05:00:07] Writing local files
[05:00:08] Completed 207500 out of 250000 steps  (83%)
[05:15:08] Timered checkpoint triggered.
[05:30:08] Timered checkpoint triggered.
[05:32:46] Writing local files
[05:32:46] Completed 210000 out of 250000 steps  (84%)
[05:47:47] Timered checkpoint triggered.
[06:02:46] Timered checkpoint triggered.
[06:05:24] Writing local files
[06:05:25] Completed 212500 out of 250000 steps  (85%)
[06:20:25] Timered checkpoint triggered.
[06:35:24] Timered checkpoint triggered.
[06:38:07] Writing local files
[06:38:07] Completed 215000 out of 250000 steps  (86%)
[06:46:40] ***** Got a SIGTERM signal (15)
[06:46:40] Killing all core threads

Folding@Home Client Shutdown.
[06:46:40] 
[06:46:40] Folding@home Core Shutdown: INTERRUPTED

Note: Please read the license agreement (fah6 -license). Further 
use of this software requires that you have read and accepted this agreement.



--- Opening Log file [September 18 06:48:17] 


# Linux Console Edition #######################################################
###############################################################################

                       Folding@Home Client Version 6.02

                          http://folding.stanford.edu

###############################################################################
###############################################################################

Launch directory: /home/folding/fah
Executable: ./fah6
Arguments: -verbosity 9 

[06:48:17] - Ask before connecting: No
[06:48:17] - User name: chrisretusn (Team 2291)
[06:48:17] - User ID: xxx
[06:48:17] - Machine ID: 1
[06:48:17] 
[06:48:18] Loaded queue successfully.
[06:48:18] 
[06:48:18] + Processing work unit
[06:48:18] Core required: FahCore_78.exe
[06:48:18] Core found.
[06:48:18] - Autosending finished units...
[06:48:18] Trying to send all finished work units
[06:48:18] + No unsent completed units remaining.
[06:48:18] - Autosend completed
[06:48:18] Working on Unit 09 [September 18 06:48:18]
[06:48:18] + Working ...
[06:48:18] - Calling './FahCore_78.exe -dir work/ -suffix 09 -checkpoint 15 -verbose -lifeline 1427 -version 602'

[06:48:18] 
[06:48:18] *------------------------------*
[06:48:18] Folding@Home Gromacs Core
[06:48:18] Version 1.90 (March 8, 2006)
[06:48:18] 
[06:48:18] Preparing to commence simulation
[06:48:18] - Looking at optimizations...
[06:48:18] - Files status OK
[06:48:19] - Expanded 766417 -> 4777964 (decompressed 623.4 percent)
[06:48:19] 
[06:48:19] Project: 11278 (Run 1, Clone 26, Gen 0)
[06:48:19] 
[06:48:19] Assembly optimizations on if available.
[06:48:19] Entering M.D.

  Gromacs is Copyright (c) 1991-2003, University of Groningen, The Netherlands
        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[06:48:40] (Starting from checkpoint)
[06:48:40] Protein: ALZHEIMERS DISEASE AMYLOID
[06:48:40] 
[06:48:40] Writing local files
[06:49:15] Completed 215000 out of 250000 steps  (86%)
[06:49:15] Extra SSE boost OK.
[07:04:17] Timered checkpoint triggered.
[07:19:17] Timered checkpoint triggered.
[07:22:06] Writing local files
[07:22:06] Completed 217500 out of 250000 steps  (87%)
[07:37:07] Timered checkpoint triggered.
[07:52:06] Timered checkpoint triggered.
[07:54:51] Writing local files
[07:54:52] Completed 220000 out of 250000 steps  (88%)
[08:09:53] Timered checkpoint triggered.
[08:24:52] Timered checkpoint triggered.
[08:27:40] Writing local files
[08:27:41] Completed 222500 out of 250000 steps  (89%)
[08:42:41] Timered checkpoint triggered.
[08:57:42] Timered checkpoint triggered.
[09:00:25] Writing local files
[09:00:25] Completed 225000 out of 250000 steps  (90%)
[09:15:25] Timered checkpoint triggered.
[09:30:26] Timered checkpoint triggered.
[09:33:11] Writing local files
[09:33:11] Completed 227500 out of 250000 steps  (91%)
[09:48:11] Timered checkpoint triggered.
[10:03:11] Timered checkpoint triggered.
[10:05:55] Writing local files
[10:05:55] Completed 230000 out of 250000 steps  (92%)
[10:20:56] Timered checkpoint triggered.
[10:35:56] Timered checkpoint triggered.
[10:38:40] Writing local files
[10:38:41] Completed 232500 out of 250000 steps  (93%)
[10:53:41] Timered checkpoint triggered.
[11:08:41] Timered checkpoint triggered.
[11:11:24] Writing local files
[11:11:24] Completed 235000 out of 250000 steps  (94%)
[11:26:24] Timered checkpoint triggered.
[11:41:25] Timered checkpoint triggered.
[11:44:10] Writing local files
[11:44:10] Completed 237500 out of 250000 steps  (95%)
[11:59:11] Timered checkpoint triggered.
[12:14:11] Timered checkpoint triggered.
[12:16:54] Writing local files
[12:16:55] Completed 240000 out of 250000 steps  (96%)
[12:31:56] Timered checkpoint triggered.
[12:46:55] Timered checkpoint triggered.
[12:48:18] - Autosending finished units...
[12:48:18] Trying to send all finished work units
[12:48:18] + No unsent completed units remaining.
[12:48:18] - Autosend completed
[12:49:41] Writing local files
[12:49:41] Completed 242500 out of 250000 steps  (97%)
[13:04:42] Timered checkpoint triggered.
[13:19:42] Timered checkpoint triggered.
[13:22:25] Writing local files
[13:22:25] Completed 245000 out of 250000 steps  (98%)
[13:37:25] Timered checkpoint triggered.
[13:52:26] Timered checkpoint triggered.
[13:55:09] Writing local files
[13:55:09] Completed 247500 out of 250000 steps  (99%)
[14:10:09] Timered checkpoint triggered.
[14:25:10] Timered checkpoint triggered.
[14:27:50] Writing local files
[14:27:50] Completed 250000 out of 250000 steps  (100%)
[14:27:50] Writing final coordinates.


[14:27:50] Past main M.D. loop
[14:28:50] 
[14:28:50] Finished Work Unit:
[14:28:50] - Reading up to 823824 from "work/wudata_09.arc": Read 823824
[14:28:50] - Reading up to 739220 from "work/wudata_09.xtc": Read 739220
[14:28:50] goefile size: 0
[14:28:50] logfile size: 31493
[14:28:50] Leaving Run
[14:28:53] - Writing 1600445 bytes of core data to disk...
[14:28:54] Done: 1599933 -> 1505948 (compressed to 94.1 percent)
[14:28:54]   ... Done.
[14:29:03] - Shutting down core
[14:29:03] 
[14:29:03] Folding@home Core Shutdown: FINISHED_UNIT
[14:29:20] CoreStatus = 64 (100)
[14:29:20] Unit 9 finished with 96 percent of time to deadline remaining.
[14:29:20] Updated performance fraction: 0.956048
[14:29:20] Sending work to server
[14:29:20] - Read packet limit of 540015616... Set to 524286976.


[14:29:20] + Attempting to send results
[14:29:20] - Reading file work/wuresults_09.dat from core
[14:29:20]   (Read 1506460 bytes from disk)
[14:29:20] Connecting to http://171.67.108.33:8080/
[14:30:36] Posted data.
[14:30:36] Initial: 0000; - Uploaded at ~19 kB/s
[14:30:36] - Averaged speed for that direction ~19 kB/s
[14:30:36] + Results successfully sent
[14:30:36] Thank you for your contribution to Folding@Home.
[14:30:36] + Number of Units Completed: 139

[14:30:39] Trying to send all finished work units
[14:30:39] + No unsent completed units remaining.
[14:30:39] - Preparing to get new work unit...
[14:30:39] + Attempting to get work packet
[14:30:39] - Will indicate memory of 1008 MB
[14:30:39] - Detect CPU. Vendor: AuthenticAMD, Family: 6, Model: 8, Stepping: 1
[14:30:39] - Connecting to assignment server
[14:30:39] Connecting to http://assign.stanford.edu:8080/
[14:30:41] Posted data.
[14:30:41] Initial: 43AB; - Successful: assigned to (171.67.108.33).
[14:30:41] + News From Folding@Home: Welcome to Folding@Home
[14:30:41] Loaded queue successfully.
[14:30:41] Connecting to http://171.67.108.33:8080/
[14:30:43] Posted data.
[14:30:43] Initial: 0000; - Receiving payload (expected size: 931146)
[14:31:01] - Downloaded at ~50 kB/s
[14:31:01] - Averaged speed for that direction ~51 kB/s
[14:31:01] + Received work.
[14:31:01] Trying to send all finished work units
[14:31:01] + No unsent completed units remaining.
[14:31:01] + Closed connections
[14:31:01] 
[14:31:01] + Processing work unit
[14:31:01] Core required: FahCore_78.exe
[14:31:01] Core found.
[14:31:01] Working on Unit 00 [September 18 14:31:01]
[14:31:01] + Working ...
[14:31:01] - Calling './FahCore_78.exe -dir work/ -suffix 00 -checkpoint 15 -verbose -lifeline 1427 -version 602'

[14:31:01] 
[14:31:01] *------------------------------*
[14:31:01] Folding@Home Gromacs Core
[14:31:01] Version 1.90 (March 8, 2006)
[14:31:01] 
[14:31:01] Preparing to commence simulation
[14:31:01] - Looking at optimizations...
[14:31:01] - Created dyn
[14:31:01] - Files status OK
[14:31:01] - Expanded 930634 -> 4787348 (decompressed 514.4 percent)
[14:31:01] - Starting from initial work packet
[14:31:01] 
[14:31:01] Project: 11277 (Run 6, Clone 65, Gen 1)
[14:31:01] 
[14:31:01] Assembly optimizations on if available.
[14:31:01] Entering M.D.

  Gromacs is Copyright (c) 1991-2003, University of Groningen, The Netherlands
        This inclusion of Gromacs code in the Folding@Home Core is under
        a special license (see http://folding.stanford.edu/gromacs.html)
         specially granted to Stanford by the copyright holders. If you
          are interested in using Gromacs, visit www.gromacs.org where
                you can download a free version of Gromacs under
         the terms of the GNU General Public License (GPL) as published
       by the Free Software Foundation; either version 2 of the License,
                     or (at your option) any later version.

[14:31:08] Protein: ALZHEIMERS DISEASE AMYLOID
[14:31:08] 
[14:31:08] Writing local files
[14:31:43] Extra SSE boost OK.
[14:31:44] Writing local files
[14:31:44] Completed 0 out of 250000 steps  (0%)
[14:46:44] Timered checkpoint triggered.
[15:01:45] Timered checkpoint triggered.
[15:04:22] Writing local files
[15:04:22] Completed 2500 out of 250000 steps  (1%)
[15:19:22] Timered checkpoint triggered.
[15:34:23] Timered checkpoint triggered.
[15:37:02] Writing local files
[15:37:02] Completed 5000 out of 250000 steps  (2%)
[15:52:03] Timered checkpoint triggered.
[16:07:04] Timered checkpoint triggered.
[16:09:42] Writing local files
[16:09:43] Completed 7500 out of 250000 steps  (3%)
[16:24:43] Timered checkpoint triggered.
[16:39:44] Timered checkpoint triggered.
[16:42:22] Writing local files
[16:42:22] Completed 10000 out of 250000 steps  (4%)
[16:57:23] Timered checkpoint triggered.
[17:12:24] Timered checkpoint triggered.
[17:15:03] Writing local files
[17:15:03] Completed 12500 out of 250000 steps  (5%)
[17:30:03] Timered checkpoint triggered.
[17:45:04] Timered checkpoint triggered.
[17:47:41] Writing local files
[17:47:41] Completed 15000 out of 250000 steps  (6%)
[18:02:42] Timered checkpoint triggered.
[18:17:43] Timered checkpoint triggered.
[18:20:23] Writing local files
[18:20:23] Completed 17500 out of 250000 steps  (7%)
[18:35:23] Timered checkpoint triggered.
[18:48:18] - Autosending finished units...
[18:48:18] Trying to send all finished work units
[18:48:18] + No unsent completed units remaining.
[18:48:18] - Autosend completed
[18:50:24] Timered checkpoint triggered.
[18:53:04] Writing local files
[18:53:04] Completed 20000 out of 250000 steps  (8%)
[19:08:05] Timered checkpoint triggered.
[19:23:06] Timered checkpoint triggered.
[19:25:46] Writing local files
[19:25:46] Completed 22500 out of 250000 steps  (9%)
[19:40:47] Timered checkpoint triggered.
[19:55:49] Timered checkpoint triggered.
[19:58:25] Writing local files
[19:58:25] Completed 25000 out of 250000 steps  (10%)
[20:13:25] Timered checkpoint triggered.
[20:28:26] Timered checkpoint triggered.
[20:31:03] Writing local files
[20:31:03] Completed 27500 out of 250000 steps  (11%)
[20:46:03] Timered checkpoint triggered.
[21:01:04] Timered checkpoint triggered.
[21:03:53] Writing local files
[21:03:53] Completed 30000 out of 250000 steps  (12%)
[21:18:54] Timered checkpoint triggered.
[21:33:54] Timered checkpoint triggered.
[21:36:33] Writing local files
[21:36:33] Completed 32500 out of 250000 steps  (13%)
[21:51:34] Timered checkpoint triggered.
[22:06:34] Timered checkpoint triggered.
[22:09:13] Writing local files
[22:09:13] Completed 35000 out of 250000 steps  (14%)
[22:24:15] Timered checkpoint triggered.
[22:39:15] Timered checkpoint triggered.
[22:41:52] Writing local files
[22:41:52] Completed 37500 out of 250000 steps  (15%)
[22:56:53] Timered checkpoint triggered.
[23:11:53] Timered checkpoint triggered.
[23:14:29] Writing local files
[23:14:29] Completed 40000 out of 250000 steps  (16%)
[23:29:30] Timered checkpoint triggered.
[23:44:30] Timered checkpoint triggered.
[23:47:06] Writing local files
[23:47:06] Completed 42500 out of 250000 steps  (17%)
[00:02:07] Timered checkpoint triggered.
[00:17:08] Timered checkpoint triggered.
[00:19:43] Writing local files
[00:19:43] Completed 45000 out of 250000 steps  (18%)
[00:34:44] Timered checkpoint triggered.
[00:48:18] - Autosending finished units...
[00:48:18] Trying to send all finished work units
[00:48:18] + No unsent completed units remaining.
[00:48:18] - Autosend completed
[00:49:45] Timered checkpoint triggered.
[00:52:20] Writing local files
[00:52:20] Completed 47500 out of 250000 steps  (19%)
[01:07:21] Timered checkpoint triggered.
[01:22:22] Timered checkpoint triggered.
[01:24:57] Writing local files
[01:24:57] Completed 50000 out of 250000 steps  (20%)
[01:39:58] Timered checkpoint triggered.
[01:54:58] Timered checkpoint triggered.
[01:57:32] Writing local files
[01:57:32] Completed 52500 out of 250000 steps  (21%)
[02:12:33] Timered checkpoint triggered.
[02:27:35] Timered checkpoint triggered.
[02:30:10] Writing local files
[02:30:10] Completed 55000 out of 250000 steps  (22%)
[02:45:11] Timered checkpoint triggered.
[03:00:12] Timered checkpoint triggered.
[03:02:46] Writing local files
[03:02:46] Completed 57500 out of 250000 steps  (23%)
[03:17:47] Timered checkpoint triggered.
[03:32:48] Timered checkpoint triggered.
[03:35:24] Writing local files
[03:35:24] Completed 60000 out of 250000 steps  (24%)
[03:50:25] Timered checkpoint triggered.
[04:05:26] Timered checkpoint triggered.
[04:08:02] Writing local files
[04:08:02] Completed 62500 out of 250000 steps  (25%)
[04:23:03] Timered checkpoint triggered.
[04:38:04] Timered checkpoint triggered.
[04:40:42] Writing local files
[04:40:42] Completed 65000 out of 250000 steps  (26%)
[04:55:43] Timered checkpoint triggered.
[05:10:44] Timered checkpoint triggered.
[05:13:19] Writing local files
[05:13:19] Completed 67500 out of 250000 steps  (27%)
[05:28:20] Timered checkpoint triggered.
[05:43:20] Timered checkpoint triggered.
[05:45:57] Writing local files
[05:45:57] Completed 70000 out of 250000 steps  (28%)
[06:00:58] Timered checkpoint triggered.
[06:15:58] Timered checkpoint triggered.
[06:18:32] Writing local files
[06:18:32] Completed 72500 out of 250000 steps  (29%)
[06:33:33] Timered checkpoint triggered.
[06:48:18] - Autosending finished units...
[06:48:18] Trying to send all finished work units
[06:48:18] + No unsent completed units remaining.
[06:48:18] - Autosend completed
[06:48:34] Timered checkpoint triggered.
[06:51:07] Writing local files
[06:51:07] Completed 75000 out of 250000 steps  (30%)
[07:06:08] Timered checkpoint triggered.
[07:21:09] Timered checkpoint triggered.
[07:23:43] Writing local files
[07:23:43] Completed 77500 out of 250000 steps  (31%)
[07:38:44] Timered checkpoint triggered.
[07:53:45] Timered checkpoint triggered.
[07:56:21] Writing local files
[07:56:22] Completed 80000 out of 250000 steps  (32%)
[08:11:23] Timered checkpoint triggered.
[08:26:23] Timered checkpoint triggered.
[08:28:56] Writing local files
[08:28:56] Completed 82500 out of 250000 steps  (33%)
[08:43:58] Timered checkpoint triggered.
[08:58:58] Timered checkpoint triggered.
[09:01:31] Writing local files
[09:01:31] Completed 85000 out of 250000 steps  (34%)
[09:16:32] Timered checkpoint triggered.
[09:31:33] Timered checkpoint triggered.
[09:34:06] Writing local files
[09:34:06] Completed 87500 out of 250000 steps  (35%)
[09:49:07] Timered checkpoint triggered.
[10:04:07] Timered checkpoint triggered.
[10:06:38] Writing local files
[10:06:38] Completed 90000 out of 250000 steps  (36%)
[10:21:39] Timered checkpoint triggered.
[10:36:40] Timered checkpoint triggered.
[10:39:15] Writing local files
[10:39:15] Completed 92500 out of 250000 steps  (37%)
[10:54:16] Timered checkpoint triggered.
[11:09:17] Timered checkpoint triggered.
[11:11:50] Writing local files
[11:11:50] Completed 95000 out of 250000 steps  (38%)
[11:26:51] Timered checkpoint triggered.
[11:41:52] Timered checkpoint triggered.
[11:44:32] Writing local files
[11:44:32] Completed 97500 out of 250000 steps  (39%)

Posted: **Sun Sep 19, 2010 4:43 pm**

Thank you. That makes it pretty clear you lost Project: 11278 (Run 1, Clone 26, Gen 0) nearly half way through. It was deleted. You received it again, completed it and sent it home. I still see nothing in the mod database.

I admire your patience and care for the project, Chris, and thank you for your report as well as the detailed information. Hopefully, Pande Group will be able to sort this out.

Posted: **Sun Sep 19, 2010 10:10 pm**

Thanks.

I was disappointed to see a WU go at almost half way, but that is better that at 100%. I've had that happen before too. I was somewhat surprised to see I received the exact same WU, but I gather it's not all that uncommon. I am glad it finally finished. Kind of strange it's not in the mod database. I use Kakao Stats - Production History - chrisretusn to verify my point data and a few other sites. I also use HFM to monitor my two folding computers. Hope to expand that eventually to five.

Thank you for the outstanding feedback.

Folding Forum

Project: 11278 (Run 1, Clone 26, Gen 0)

Project: 11278 (Run 1, Clone 26, Gen 0)

Re: Project: 11278 (Run 1, Clone 26, Gen 0)

Re: Project: 11278 (Run 1, Clone 26, Gen 0)

Re: Project: 11278 (Run 1, Clone 26, Gen 0)

Re: Project: 11278 (Run 1, Clone 26, Gen 0)

Re: Project: 11278 (Run 1, Clone 26, Gen 0)

Re: Project: 11278 (Run 1, Clone 26, Gen 0)

Re: Project: 11278 (Run 1, Clone 26, Gen 0)

Re: Project: 11278 (Run 1, Clone 26, Gen 0)

Re: Project: 11278 (Run 1, Clone 26, Gen 0)

Re: Project: 11278 (Run 1, Clone 26, Gen 0)

Re: Project: 11278 (Run 1, Clone 26, Gen 0)