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Project: 6076 (Run 0, Clone 163, Gen 40)

Posted: Wed Sep 15, 2010 6:54 am
by artoar_11
This WU is good or bad? CPU-Q9550 @ 3200MHz.
(Manually removing part of the log file because - Your message contains 126504 characters. The maximum number of allowed characters is 60000).

Code: Select all

[02:51:01] Completed 1920000 out of 2000000 steps  (96%)
[03:02:46] Completed 1940000 out of 2000000 steps  (97%)
[03:14:31] Completed 1960000 out of 2000000 steps  (98%)
[03:26:15] Completed 1980000 out of 2000000 steps  (99%)
[03:38:01] Completed 2000000 out of 2000000 steps  (100%)
[03:38:02] DynamicWrapper: Finished Work Unit: sleep=10000
[03:38:12] 
[03:38:12] Finished Work Unit:
[03:38:12] - Reading up to 687408 from "work/wudata_05.trr": Read 687408
[03:38:12] trr file hash check passed.
[03:38:12] - Reading up to 42671492 from "work/wudata_05.xtc": Read 42671492
[03:38:13] xtc file hash check passed.
[03:38:13] edr file hash check passed.
[03:38:13] logfile size: 288109
[03:38:13] Leaving Run
[03:38:15] - Writing 43649345 bytes of core data to disk...
[03:38:16]   ... Done.
[03:38:18] - Shutting down core
[03:38:18] 
[03:38:18] Folding@home Core Shutdown: FINISHED_UNIT
[03:38:20] CoreStatus = 64 (100)
[03:38:20] Unit 5 finished with 86 percent of time to deadline remaining.
[03:38:20] Updated performance fraction: 0.922872
[03:38:20] Sending work to server
[03:38:20] Project: 6702 (Run 5, Clone 21, Gen 43)


[03:38:20] + Attempting to send results [September 15 03:38:20 UTC]
[03:38:20] - Reading file work/wuresults_05.dat from core
[03:38:21]   (Read 43649345 bytes from disk)
[03:38:21] Connecting to http://171.64.65.56:8080/
[03:39:52] Posted data.
[03:39:53] Initial: 0000; - Uploaded at ~463 kB/s
[03:39:54] - Averaged speed for that direction ~298 kB/s
[03:39:54] + Results successfully sent
[03:39:54] Thank you for your contribution to Folding@Home.
[03:39:54] + Number of Units Completed: 63

[03:39:59] Trying to send all finished work units
[03:39:59] + No unsent completed units remaining.
[03:39:59] - Preparing to get new work unit...
[03:39:59] Cleaning up work directory
[03:39:59] + Attempting to get work packet
[03:39:59] Passkey found
[03:39:59] - Will indicate memory of 2047 MB
[03:39:59] - Connecting to assignment server
[03:39:59] Connecting to http://assign.stanford.edu:8080/
[03:40:00] Posted data.
[03:40:00] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:40:00] + News From Folding@Home: Welcome to Folding@Home
[03:40:00] Loaded queue successfully.
[03:40:00] Sent data
[03:40:00] Connecting to http://171.64.65.54:8080/
[03:40:01] Posted data.
[03:40:01] Initial: 0000; - Receiving payload (expected size: 1763097)
[03:40:11] - Downloaded at ~172 kB/s
[03:40:11] - Averaged speed for that direction ~142 kB/s
[03:40:11] + Received work.
[03:40:11] Trying to send all finished work units
[03:40:11] + No unsent completed units remaining.
[03:40:11] + Closed connections
[03:40:11] 
[03:40:11] + Processing work unit
[03:40:11] Core required: FahCore_a3.exe
[03:40:11] Core found.
[03:40:11] Working on queue slot 06 [September 15 03:40:11 UTC]
[03:40:11] + Working ...
[03:40:11] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 06 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[03:40:11] 
[03:40:11] *------------------------------*
[03:40:11] Folding@Home Gromacs SMP Core
[03:40:11] Version 2.22 (Mar 12, 2010)
[03:40:11] 
[03:40:11] Preparing to commence simulation
[03:40:11] - Assembly optimizations manually forced on.
[03:40:11] - Not checking prior termination.
[03:40:12] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[03:40:12] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[03:40:12] - Digital signature verified
[03:40:12] 
[03:40:12] Project: 6076 (Run 0, Clone 163, Gen 40)
[03:40:12] 
[03:40:12] Assembly optimizations on if available.
[03:40:12] Entering M.D.
[03:40:18] Completed 0 out of 500000 steps  (0%)
[03:40:18] Gromacs cannot continue further.
[03:40:18] Going to send back what have done -- stepsTotalG=500000
[03:40:18] Work fraction=-1.#IND steps=500000.
[03:40:22] logfile size=0 infoLength=0 edr=0 trr=23
[03:40:22] logfile size: 0 info=0 bed=0 hdr=23
[03:40:22] - Writing 640 bytes of core data to disk...
[03:40:22]   ... Done.
[03:40:25] CoreStatus = C0000005 (-1073741819)
[03:40:25] Client-core communications error: ERROR 0xc0000005
[03:40:25] Deleting current work unit & continuing...
[03:40:38] Trying to send all finished work units
[03:40:38] + No unsent completed units remaining.
[03:40:38] - Preparing to get new work unit...
[03:40:38] Cleaning up work directory
[03:40:38] + Attempting to get work packet
[03:40:38] Passkey found
[03:40:38] - Will indicate memory of 2047 MB
[03:40:38] - Connecting to assignment server
[03:40:38] Connecting to http://assign.stanford.edu:8080/
[03:40:39] Posted data.
[03:40:39] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:40:39] + News From Folding@Home: Welcome to Folding@Home
[03:40:39] Loaded queue successfully.
[03:40:39] Sent data
[03:40:39] Connecting to http://171.64.65.54:8080/
[03:40:40] Posted data.
[03:40:40] Initial: 0000; - Receiving payload (expected size: 1763097)
[03:40:50] - Downloaded at ~172 kB/s
[03:40:50] - Averaged speed for that direction ~148 kB/s
[03:40:50] + Received work.
[03:40:50] + Closed connections
[03:40:55] 
[03:40:55] + Processing work unit
[03:40:55] Core required: FahCore_a3.exe
[03:40:55] Core found.
[03:40:55] Working on queue slot 07 [September 15 03:40:55 UTC]
[03:40:55] + Working ...
[03:40:55] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 07 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[03:40:55] 
[03:40:55] *------------------------------*
[03:40:55] Folding@Home Gromacs SMP Core
[03:40:55] Version 2.22 (Mar 12, 2010)
[03:40:55] 
[03:40:55] Preparing to commence simulation
[03:40:55] - Assembly optimizations manually forced on.
[03:40:55] - Not checking prior termination.
[03:40:56] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[03:40:56] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[03:40:56] - Digital signature verified
[03:40:56] 
[03:40:56] Project: 6076 (Run 0, Clone 163, Gen 40)
[03:40:56] 
[03:40:56] Assembly optimizations on if available.
[03:40:56] Entering M.D.
[03:41:02] Completed 0 out of 500000 steps  (0%)
[03:41:02] Gromacs cannot continue further.
[03:41:02] Going to send back what have done -- stepsTotalG=500000
[03:41:02] Work fraction=-1.#IND steps=500000.
[03:41:09] logfile size=0 infoLength=0 edr=0 trr=23
[03:41:09] logfile size: 0 info=0 bed=0 hdr=23
[03:41:09] - Writing 640 bytes of core data to disk...
[03:41:12] CoreStatus = C0000005 (-1073741819)
[03:41:12] Client-core communications error: ERROR 0xc0000005
[03:41:12] Deleting current work unit & continuing...
[03:41:24] Trying to send all finished work units
[03:41:24] + No unsent completed units remaining.
[03:41:24] - Preparing to get new work unit...
[03:41:24] Cleaning up work directory
[03:41:24] + Attempting to get work packet
[03:41:24] Passkey found
[03:41:24] - Will indicate memory of 2047 MB
[03:41:24] - Connecting to assignment server
[03:41:24] Connecting to http://assign.stanford.edu:8080/
[03:41:25] Posted data.
[03:41:25] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:41:25] + News From Folding@Home: Welcome to Folding@Home
[03:41:25] Loaded queue successfully.
[03:41:25] Sent data
[03:41:25] Connecting to http://171.64.65.54:8080/
[03:41:26] Posted data.
[03:41:26] Initial: 0000; - Receiving payload (expected size: 1763097)
[03:41:37] - Downloaded at ~156 kB/s
[03:41:37] - Averaged speed for that direction ~149 kB/s
[03:41:37] + Received work.
[03:41:37] + Closed connections
[03:41:42] 
[03:41:42] + Processing work unit
[03:41:42] Core required: FahCore_a3.exe
[03:41:42] Core found.
[03:41:42] Working on queue slot 08 [September 15 03:41:42 UTC]
[03:41:42] + Working ...
[03:41:42] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 08 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[03:41:42] 
[03:41:42] *------------------------------*
[03:41:42] Folding@Home Gromacs SMP Core
[03:41:42] Version 2.22 (Mar 12, 2010)
[03:41:42] 
[03:41:42] Preparing to commence simulation
[03:41:42] - Assembly optimizations manually forced on.
[03:41:42] - Not checking prior termination.
[03:41:42] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[03:41:42] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[03:41:42] - Digital signature verified
[03:41:42] 
[03:41:42] Project: 6076 (Run 0, Clone 163, Gen 40)
[03:41:42] 
[03:41:42] Assembly optimizations on if available.
[03:41:42] Entering M.D.
[03:41:48] Completed 0 out of 500000 steps  (0%)
[03:41:54] CoreStatus = C0000005 (-1073741819)
[03:41:54] Client-core communications error: ERROR 0xc0000005
[03:41:54] - Attempting to download new core...
[03:41:54] + Downloading new core: FahCore_a3.exe
[03:41:54] Downloading core (/~pande/Win32/x86/Core_a3.fah from www.stanford.edu)
[03:41:56] Initial: AFDE; + 10240 bytes downloaded
.........................
[03:42:06] Initial: 795D; + 2641920 bytes downloaded
[03:42:06] Initial: 2EEE; + 2652160 bytes downloaded
[03:42:06] Initial: BA3B; + 2662400 bytes downloaded
[03:42:06] Initial: 0404; + 2672640 bytes downloaded
[03:42:06] Initial: 4809; + 2682880 bytes downloaded
[03:42:06] Initial: 4BE5; + 2693120 bytes downloaded
[03:42:06] Initial: A3BF; + 2703360 bytes downloaded
[03:42:06] Initial: 3ABE; + 2711113 bytes downloaded
[03:42:06] Verifying core Core_a3.fah...
[03:42:07] Signature is VALID
[03:42:07] 
[03:42:07] Trying to unzip core FahCore_a3.exe
[03:42:07] Decompressed FahCore_a3.exe (9325056 bytes) successfully
[03:42:12] + Core successfully engaged
[03:42:13] Deleting current work unit & continuing...
[03:42:25] Trying to send all finished work units
[03:42:25] + No unsent completed units remaining.
[03:42:25] - Preparing to get new work unit...
[03:42:25] Cleaning up work directory
[03:42:25] + Attempting to get work packet
[03:42:25] Passkey found
[03:42:25] - Will indicate memory of 2047 MB
[03:42:25] - Connecting to assignment server
[03:42:25] Connecting to http://assign.stanford.edu:8080/
[03:42:26] Posted data.
[03:42:26] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:42:26] + News From Folding@Home: Welcome to Folding@Home
[03:42:26] Loaded queue successfully.
[03:42:26] Sent data
[03:42:26] Connecting to http://171.64.65.54:8080/
[03:42:27] Posted data.
[03:42:27] Initial: 0000; - Receiving payload (expected size: 1763097)
[03:42:37] - Downloaded at ~172 kB/s
[03:42:37] - Averaged speed for that direction ~154 kB/s
[03:42:37] + Received work.
[03:42:37] + Closed connections
[03:42:42] 
[03:42:42] + Processing work unit
[03:42:42] Core required: FahCore_a3.exe
[03:42:42] Core found.
[03:42:42] Working on queue slot 09 [September 15 03:42:42 UTC]
[03:42:42] + Working ...
[03:42:42] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 09 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[03:42:42] 
[03:42:42] *------------------------------*
[03:42:42] Folding@Home Gromacs SMP Core
[03:42:42] Version 2.22 (Mar 12, 2010)
[03:42:42] 
[03:42:42] Preparing to commence simulation
[03:42:42] - Assembly optimizations manually forced on.
[03:42:42] - Not checking prior termination.
[03:42:43] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[03:42:43] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[03:42:43] - Digital signature verified
[03:42:43] 
[03:42:43] Project: 6076 (Run 0, Clone 163, Gen 40)
[03:42:43] 
[03:42:43] Assembly optimizations on if available.
[03:42:43] Entering M.D.
[03:42:49] Completed 0 out of 500000 steps  (0%)
[03:42:49] mdrun returned 255
[03:42:49] Going to send back what have done -- stepsTotalG=500000
[03:42:49] Work fraction=0.0000 steps=500000.
[03:42:53] logfile size=0 infoLength=0 edr=0 trr=25
[03:42:53] logfile size: 0 info=0 bed=0 hdr=25
[03:42:53] - Writing 642 bytes of core data to disk...
[03:42:53]   ... Done.
[03:42:53] 
[03:42:53] Folding@home Core Shutdown: UNSTABLE_MACHINE
[03:42:57] CoreStatus = 7A (122)
[03:42:57] Sending work to server
[03:42:57] Project: 6076 (Run 0, Clone 163, Gen 40)


[03:42:57] + Attempting to send results [September 15 03:42:57 UTC]
[03:42:57] - Reading file work/wuresults_09.dat from core
[03:42:57]   (Read 642 bytes from disk)
[03:42:57] Connecting to http://171.64.65.54:8080/
[03:42:58] Posted data.
[03:42:58] Initial: 0000; - Uploaded at ~1 kB/s
[03:42:58] - Averaged speed for that direction ~239 kB/s
[03:42:58] + Results successfully sent
[03:42:58] Thank you for your contribution to Folding@Home.
[03:43:02] Trying to send all finished work units
[03:43:02] + No unsent completed units remaining.
[03:43:02] - Preparing to get new work unit...
[03:43:02] Cleaning up work directory
[03:43:02] + Attempting to get work packet
[03:43:02] Passkey found
[03:43:02] - Will indicate memory of 2047 MB
[03:43:02] - Connecting to assignment server
[03:43:02] Connecting to http://assign.stanford.edu:8080/
[03:43:03] Posted data.
[03:43:03] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:43:03] + News From Folding@Home: Welcome to Folding@Home
[03:43:03] Loaded queue successfully.
[03:43:03] Sent data
[03:43:03] Connecting to http://171.64.65.54:8080/
[03:43:05] Posted data.
[03:43:05] Initial: 0000; - Receiving payload (expected size: 1763097)
[03:43:13] - Downloaded at ~215 kB/s
[03:43:13] - Averaged speed for that direction ~166 kB/s
[03:43:13] + Received work.
[03:43:13] Trying to send all finished work units
[03:43:13] + No unsent completed units remaining.
[03:43:13] + Closed connections
[03:43:18] 
[03:43:18] + Processing work unit
[03:43:18] Core required: FahCore_a3.exe
[03:43:18] Core found.
[03:43:18] Working on queue slot 00 [September 15 03:43:18 UTC]
[03:43:18] + Working ...
[03:43:18] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 00 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[03:43:19] 
[03:43:19] *------------------------------*
[03:43:19] Folding@Home Gromacs SMP Core
[03:43:19] Version 2.22 (Mar 12, 2010)
[03:43:19] 
[03:43:19] Preparing to commence simulation
[03:43:19] - Assembly optimizations manually forced on.
[03:43:19] - Not checking prior termination.
[03:43:19] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[03:43:19] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[03:43:19] - Digital signature verified
[03:43:19] 
[03:43:19] Project: 6076 (Run 0, Clone 163, Gen 40)
[03:43:19] 
[03:43:19] Assembly optimizations on if available.
[03:43:19] Entering M.D.
[03:43:25] Completed 0 out of 500000 steps  (0%)
[03:43:25] Gromacs cannot continue further.
[03:43:25] Going to send back what have done -- stepsTotalG=500000
[03:43:25] Work fraction=-1.#IND steps=500000.
[03:43:31] CoreStatus = C0000005 (-1073741819)
[03:43:31] Client-core communications error: ERROR 0xc0000005
[03:43:31] Deleting current work unit & continuing...
[03:43:43] Trying to send all finished work units
[03:43:43] + No unsent completed units remaining.
[03:43:43] - Preparing to get new work unit...
[03:43:43] Cleaning up work directory
[03:43:43] + Attempting to get work packet
[03:43:43] Passkey found
[03:43:43] - Will indicate memory of 2047 MB
[03:43:43] - Connecting to assignment server
[03:43:43] Connecting to http://assign.stanford.edu:8080/
[03:43:44] Posted data.
[03:43:44] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:43:44] + News From Folding@Home: Welcome to Folding@Home
[03:43:44] Loaded queue successfully.
[03:43:44] Sent data
[03:43:44] Connecting to http://171.64.65.54:8080/
[03:43:46] Posted data.
[03:43:46] Initial: 0000; - Receiving payload (expected size: 1763097)
[03:43:57] - Downloaded at ~156 kB/s
[03:43:57] - Averaged speed for that direction ~164 kB/s
[03:43:57] + Received work.
[03:43:57] + Closed connections
[03:44:02] 
[03:44:02] + Processing work unit
[03:44:02] Core required: FahCore_a3.exe
[03:44:02] Core found.
[03:44:02] Working on queue slot 01 [September 15 03:44:02 UTC]
[03:44:02] + Working ...
[03:44:02] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 01 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[03:44:02] 
[03:44:02] *------------------------------*
[03:44:02] Folding@Home Gromacs SMP Core
[03:44:02] Version 2.22 (Mar 12, 2010)
[03:44:02] 
[03:44:02] Preparing to commence simulation
[03:44:02] - Assembly optimizations manually forced on.
[03:44:02] - Not checking prior termination.
[03:44:03] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[03:44:03] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[03:44:03] - Digital signature verified
[03:44:03] 
[03:44:03] Project: 6076 (Run 0, Clone 163, Gen 40)
[03:44:03] 
[03:44:03] Assembly optimizations on if available.
[03:44:03] Entering M.D.
[03:44:09] Completed 0 out of 500000 steps  (0%)
[03:44:09] Gromacs cannot continue further.
[03:44:09] Going to send back what have done -- stepsTotalG=500000
[03:44:09] Work fraction=-1.#IND steps=500000.
[03:44:15] CoreStatus = C0000005 (-1073741819)
[03:44:15] Client-core communications error: ERROR 0xc0000005
[03:44:15] Deleting current work unit & continuing...
[03:44:27] Trying to send all finished work units
[03:44:27] + No unsent completed units remaining.
[03:44:27] - Preparing to get new work unit...
[03:44:27] Cleaning up work directory
[03:44:27] + Attempting to get work packet
[03:44:27] Passkey found
[03:44:27] - Will indicate memory of 2047 MB
[03:44:27] - Connecting to assignment server
[03:44:27] Connecting to http://assign.stanford.edu:8080/
[03:44:28] Posted data.
[03:44:28] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:44:28] + News From Folding@Home: Welcome to Folding@Home
[03:44:28] Loaded queue successfully.
[03:44:28] Sent data
[03:44:28] Connecting to http://171.64.65.54:8080/
[03:44:29] Posted data.
[03:44:29] Initial: 0000; - Receiving payload (expected size: 1763097)
[03:44:39] - Downloaded at ~172 kB/s
[03:44:39] - Averaged speed for that direction ~166 kB/s
[03:44:39] + Received work.
[03:44:39] + Closed connections
[03:44:44] 
[03:44:44] + Processing work unit
[03:44:44] Core required: FahCore_a3.exe
[03:44:44] Core found.
[03:44:44] Working on queue slot 02 [September 15 03:44:44 UTC]
[03:44:44] + Working ...
[03:44:44] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 02 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[03:44:44] 
[03:44:44] *------------------------------*
[03:44:44] Folding@Home Gromacs SMP Core
[03:44:44] Version 2.22 (Mar 12, 2010)
[03:44:44] 
[03:44:44] Preparing to commence simulation
[03:44:44] - Assembly optimizations manually forced on.
[03:44:44] - Not checking prior termination.
[03:44:45] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[03:44:45] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[03:44:45] - Digital signature verified
[03:44:45] 
[03:44:45] Project: 6076 (Run 0, Clone 163, Gen 40)
[03:44:45] 
[03:44:45] Assembly optimizations on if available.
[03:44:45] Entering M.D.
[03:44:51] Completed 0 out of 500000 steps  (0%)
[03:44:51] Gromacs cannot continue further.
[03:44:51] Going to send back what have done -- stepsTotalG=500000
[03:44:51] Work fraction=-1.#IND steps=500000.
[03:44:57] CoreStatus = C0000005 (-1073741819)
[03:44:57] Client-core communications error: ERROR 0xc0000005
[03:44:57] - Attempting to download new core...
[03:44:57] + Downloading new core: FahCore_a3.exe
[03:44:57] Downloading core (/~pande/Win32/x86/Core_a3.fah from www.stanford.edu)
[03:44:58] Initial: AFDE; + 10240 bytes downloaded
[03:44:58] Initial: D8B1; + 20480 bytes downloaded
[03:44:59] Initial: 7D98; + 30720 bytes downloaded
......................................................
[03:45:07] Initial: 0404; + 2672640 bytes downloaded
[03:45:07] Initial: 4809; + 2682880 bytes downloaded
[03:45:07] Initial: 4BE5; + 2693120 bytes downloaded
[03:45:07] Initial: A3BF; + 2703360 bytes downloaded
[03:45:07] Initial: 3ABE; + 2711113 bytes downloaded
[03:45:07] Verifying core Core_a3.fah...
[03:45:07] Signature is VALID
[03:45:07] 
[03:45:07] Trying to unzip core FahCore_a3.exe
[03:45:08] Decompressed FahCore_a3.exe (9325056 bytes) successfully
[03:45:13] + Core successfully engaged
[03:45:13] Deleting current work unit & continuing...
[03:45:25] Trying to send all finished work units
[03:45:25] + No unsent completed units remaining.
[03:45:25] - Preparing to get new work unit...
[03:45:25] Cleaning up work directory
[03:45:25] + Attempting to get work packet
[03:45:25] Passkey found
[03:45:25] - Will indicate memory of 2047 MB
[03:45:25] - Connecting to assignment server
[03:45:25] Connecting to http://assign.stanford.edu:8080/
[03:45:27] Posted data.
[03:45:27] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:45:27] + News From Folding@Home: Welcome to Folding@Home
[03:45:27] Loaded queue successfully.
[03:45:27] Sent data
[03:45:27] Connecting to http://171.64.65.54:8080/
[03:45:28] Posted data.
[03:45:28] Initial: 0000; - Receiving payload (expected size: 1763097)
[03:45:37] - Downloaded at ~191 kB/s
[03:45:37] - Averaged speed for that direction ~171 kB/s
[03:45:37] + Received work.
[03:45:37] + Closed connections
[03:45:42] 
[03:45:42] + Processing work unit
[03:45:42] Core required: FahCore_a3.exe
[03:45:42] Core found.
[03:45:42] Working on queue slot 03 [September 15 03:45:42 UTC]
[03:45:42] + Working ...
[03:45:42] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 03 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[03:45:43] 
[03:45:43] *------------------------------*
[03:45:43] Folding@Home Gromacs SMP Core
[03:45:43] Version 2.22 (Mar 12, 2010)
[03:45:43] 
[03:45:43] Preparing to commence simulation
[03:45:43] - Assembly optimizations manually forced on.
[03:45:43] - Not checking prior termination.
[03:45:43] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[03:45:43] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[03:45:43] - Digital signature verified
[03:45:43] 
[03:45:43] Project: 6076 (Run 0, Clone 163, Gen 40)
[03:45:43] 
[03:45:43] Assembly optimizations on if available.
[03:45:43] Entering M.D.
[03:45:49] Completed 0 out of 500000 steps  (0%)
[03:45:49] Gromacs cannot continue further.
[03:45:49] Going to send back what have done -- stepsTotalG=500000
[03:45:49] Work fraction=-1.#IND steps=500000.
[03:45:55] CoreStatus = C0000005 (-1073741819)
[03:45:55] Client-core communications error: ERROR 0xc0000005
[03:45:55] Deleting current work unit & continuing...
[03:46:07] Trying to send all finished work units
[03:46:07] + No unsent completed units remaining.
[03:46:07] - Preparing to get new work unit...
[03:46:07] Cleaning up work directory
[03:46:07] + Attempting to get work packet
[03:46:07] Passkey found
[03:46:07] - Will indicate memory of 2047 MB
[03:46:07] - Connecting to assignment server
[03:46:07] Connecting to http://assign.stanford.edu:8080/
[03:46:08] Posted data.
[03:46:08] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:46:08] + News From Folding@Home: Welcome to Folding@Home
[03:46:08] Loaded queue successfully.
[03:46:08] Sent data
[03:46:08] Connecting to http://171.64.65.54:8080/
[03:46:10] Posted data.
[03:46:10] Initial: 0000; - Receiving payload (expected size: 1763097)
[03:46:19] - Downloaded at ~191 kB/s
[03:46:19] - Averaged speed for that direction ~175 kB/s
[03:46:19] + Received work.
[03:46:19] + Closed connections
[03:46:24] 
[03:46:24] + Processing work unit
[03:46:24] Core required: FahCore_a3.exe
[03:46:24] Core found.
[03:46:24] Working on queue slot 04 [September 15 03:46:24 UTC]
[03:46:24] + Working ...
[03:46:24] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 04 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[03:46:24] 
[03:46:24] *------------------------------*
[03:46:24] Folding@Home Gromacs SMP Core
[03:46:24] Version 2.22 (Mar 12, 2010)
[03:46:24] 
[03:46:24] Preparing to commence simulation
[03:46:24] - Assembly optimizations manually forced on.
[03:46:24] - Not checking prior termination.
[03:46:25] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[03:46:25] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[03:46:25] - Digital signature verified
[03:46:25] 
[03:46:25] Project: 6076 (Run 0, Clone 163, Gen 40)
[03:46:25] 
[03:46:25] Assembly optimizations on if available.
[03:46:25] Entering M.D.
[03:46:31] Completed 0 out of 500000 steps  (0%)
[03:46:31] Gromacs cannot continue further.
[03:46:31] Going to send back what have done -- stepsTotalG=500000
[03:46:31] Work fraction=-1.#IND steps=500000.
[03:46:37] CoreStatus = C0000005 (-1073741819)
[03:46:37] Client-core communications error: ERROR 0xc0000005
[03:46:37] Deleting current work unit & continuing...
[03:46:49] Trying to send all finished work units
[03:46:49] + No unsent completed units remaining.
[03:46:49] - Preparing to get new work unit...
[03:46:49] Cleaning up work directory
[03:46:49] + Attempting to get work packet
[03:46:49] Passkey found
[03:46:49] - Will indicate memory of 2047 MB
[03:46:49] - Connecting to assignment server
[03:46:49] Connecting to http://assign.stanford.edu:8080/
[03:46:50] Posted data.
[03:46:50] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:46:50] + News From Folding@Home: Welcome to Folding@Home
[03:46:50] Loaded queue successfully.
[03:46:50] Sent data
[03:46:50] Connecting to http://171.64.65.54:8080/
[03:46:51] Posted data.
[03:46:51] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[03:46:51] - Attempt #1  to get work failed, and no other work to do.
Waiting before retry.
[03:47:09] + Attempting to get work packet
[03:47:09] Passkey found
[03:47:09] - Will indicate memory of 2047 MB
[03:47:09] - Connecting to assignment server
[03:47:09] Connecting to http://assign.stanford.edu:8080/
[03:47:10] Posted data.
[03:47:10] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:47:10] + News From Folding@Home: Welcome to Folding@Home
[03:47:10] Loaded queue successfully.
[03:47:10] Sent data
[03:47:10] Connecting to http://171.64.65.54:8080/
[03:47:11] Posted data.
[03:47:11] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[03:47:11] - Attempt #2  to get work failed, and no other work to do.
Waiting before retry.
[03:47:25] + Attempting to get work packet
[03:47:25] Passkey found
[03:47:25] - Will indicate memory of 2047 MB
[03:47:25] - Connecting to assignment server
[03:47:25] Connecting to http://assign.stanford.edu:8080/
[03:47:26] Posted data.
[03:47:26] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:47:26] + News From Folding@Home: Welcome to Folding@Home
[03:47:26] Loaded queue successfully.
[03:47:26] Sent data
[03:47:26] Connecting to http://171.64.65.54:8080/
[03:47:27] Posted data.
[03:47:27] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[03:47:27] - Attempt #3  to get work failed, and no other work to do.
Waiting before retry.
[03:47:48] + Attempting to get work packet
[03:47:48] Passkey found
[03:47:48] - Will indicate memory of 2047 MB
[03:47:48] - Connecting to assignment server
[03:47:48] Connecting to http://assign.stanford.edu:8080/
[03:47:49] Posted data.
[03:47:49] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:47:49] + News From Folding@Home: Welcome to Folding@Home
[03:47:49] Loaded queue successfully.
[03:47:49] Sent data
[03:47:49] Connecting to http://171.64.65.54:8080/
[03:47:50] Posted data.
[03:47:50] Initial: 0000; - Receiving payload (expected size: 1763097)
[03:48:00] - Downloaded at ~172 kB/s
[03:48:00] - Averaged speed for that direction ~174 kB/s
[03:48:00] + Received work.
[03:48:00] + Closed connections
[03:48:05] 
[03:48:05] + Processing work unit
[03:48:05] Core required: FahCore_a3.exe
[03:48:05] Core found.
[03:48:05] Working on queue slot 05 [September 15 03:48:05 UTC]
[03:48:05] + Working ...
[03:48:05] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 05 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[03:48:05] 
[03:48:05] *------------------------------*
[03:48:05] Folding@Home Gromacs SMP Core
[03:48:05] Version 2.22 (Mar 12, 2010)
[03:48:05] 
[03:48:05] Preparing to commence simulation
[03:48:05] - Assembly optimizations manually forced on.
[03:48:05] - Not checking prior termination.
[03:48:06] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[03:48:06] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[03:48:06] - Digital signature verified
[03:48:06] 
[03:48:06] Project: 6076 (Run 0, Clone 163, Gen 40)
[03:48:06] 
[03:48:06] Assembly optimizations on if available.
[03:48:06] Entering M.D.
[03:48:12] Completed 0 out of 500000 steps  (0%)
[03:48:18] CoreStatus = C0000005 (-1073741819)
[03:48:18] Client-core communications error: ERROR 0xc0000005
[03:48:18] - Attempting to download new core...
[03:48:18] + Downloading new core: FahCore_a3.exe
[03:48:18] Downloading core (/~pande/Win32/x86/Core_a3.fah from www.stanford.edu)
[03:48:19] Initial: AFDE; + 10240 bytes downloaded
[03:48:19] Initial: D8B1; + 20480 bytes downloaded
[03:48:20] Initial: 7D98; + 30720 bytes downloaded
........................................
[03:48:28] Initial: 4809; + 2682880 bytes downloaded
[03:48:28] Initial: 4BE5; + 2693120 bytes downloaded
[03:48:28] Initial: A3BF; + 2703360 bytes downloaded
[03:48:28] Initial: 3ABE; + 2711113 bytes downloaded
[03:48:28] Verifying core Core_a3.fah...
[03:48:28] Signature is VALID
[03:48:28] 
[03:48:28] Trying to unzip core FahCore_a3.exe
[03:48:29] Decompressed FahCore_a3.exe (9325056 bytes) successfully
[03:48:34] + Core successfully engaged
[03:48:34] Deleting current work unit & continuing...
[03:48:46] Trying to send all finished work units
[03:48:46] + No unsent completed units remaining.
[03:48:46] - Preparing to get new work unit...
[03:48:46] Cleaning up work directory
[03:48:46] + Attempting to get work packet
[03:48:46] Passkey found
[03:48:46] - Will indicate memory of 2047 MB
[03:48:46] - Connecting to assignment server
[03:48:46] Connecting to http://assign.stanford.edu:8080/
[03:48:47] Posted data.
[03:48:47] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:48:47] + News From Folding@Home: Welcome to Folding@Home
[03:48:47] Loaded queue successfully.
[03:48:47] Sent data
[03:48:47] Connecting to http://171.64.65.54:8080/
[03:48:48] Posted data.
[03:48:48] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[03:48:48] - Attempt #1  to get work failed, and no other work to do.
Waiting before retry.
[03:48:59] + Attempting to get work packet
[03:48:59] Passkey found
[03:48:59] - Will indicate memory of 2047 MB
[03:48:59] - Connecting to assignment server
[03:48:59] Connecting to http://assign.stanford.edu:8080/
[03:49:01] Posted data.
[03:49:01] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:49:01] + News From Folding@Home: Welcome to Folding@Home
[03:49:01] Loaded queue successfully.
[03:49:01] Sent data
[03:49:01] Connecting to http://171.64.65.54:8080/
[03:49:02] Posted data.
[03:49:02] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[03:49:02] - Attempt #2  to get work failed, and no other work to do.
Waiting before retry.
[03:49:21] + Attempting to get work packet
[03:49:21] Passkey found
[03:49:21] - Will indicate memory of 2047 MB
[03:49:21] - Connecting to assignment server
[03:49:21] Connecting to http://assign.stanford.edu:8080/
[03:49:22] Posted data.
[03:49:22] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:49:22] + News From Folding@Home: Welcome to Folding@Home
[03:49:22] Loaded queue successfully.
[03:49:22] Sent data
[03:49:22] Connecting to http://171.64.65.54:8080/
[03:49:23] Posted data.
[03:49:23] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[03:49:23] - Attempt #3  to get work failed, and no other work to do.
Waiting before retry.
[03:49:51] + Attempting to get work packet
[03:49:51] Passkey found
[03:49:51] - Will indicate memory of 2047 MB
[03:49:51] - Connecting to assignment server
[03:49:51] Connecting to http://assign.stanford.edu:8080/
[03:49:52] Posted data.
[03:49:52] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:49:52] + News From Folding@Home: Welcome to Folding@Home
[03:49:53] Loaded queue successfully.
[03:49:53] Sent data
[03:49:53] Connecting to http://171.64.65.54:8080/
[03:49:53] Posted data.
[03:49:53] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[03:49:54] - Attempt #4  to get work failed, and no other work to do.
Waiting before retry.
[03:50:44] + Attempting to get work packet
[03:50:44] Passkey found
[03:50:44] - Will indicate memory of 2047 MB
[03:50:44] - Connecting to assignment server
[03:50:44] Connecting to http://assign.stanford.edu:8080/
[03:50:45] Posted data.
[03:50:45] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:50:45] + News From Folding@Home: Welcome to Folding@Home
[03:50:46] Loaded queue successfully.
[03:50:46] Sent data
[03:50:46] Connecting to http://171.64.65.54:8080/
[03:50:46] Posted data.
[03:50:46] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[03:50:47] - Attempt #5  to get work failed, and no other work to do.
Waiting before retry.
[03:52:15] + Attempting to get work packet
[03:52:15] Passkey found
[03:52:15] - Will indicate memory of 2047 MB
[03:52:15] - Connecting to assignment server
[03:52:15] Connecting to http://assign.stanford.edu:8080/
[03:52:16] Posted data.
[03:52:16] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:52:16] + News From Folding@Home: Welcome to Folding@Home
[03:52:16] Loaded queue successfully.
[03:52:16] Sent data
[03:52:16] Connecting to http://171.64.65.54:8080/
[03:52:17] Posted data.
[03:52:17] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[03:52:17] - Attempt #6  to get work failed, and no other work to do.
Waiting before retry.
[03:55:05] + Attempting to get work packet
[03:55:05] Passkey found
[03:55:05] - Will indicate memory of 2047 MB
[03:55:05] - Connecting to assignment server
[03:55:05] Connecting to http://assign.stanford.edu:8080/
[03:55:06] Posted data.
[03:55:06] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[03:55:06] + News From Folding@Home: Welcome to Folding@Home
[03:55:06] Loaded queue successfully.
[03:55:06] Sent data
[03:55:06] Connecting to http://171.64.65.54:8080/
[03:55:07] Posted data.
[03:55:07] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[03:55:07] - Attempt #7  to get work failed, and no other work to do.
Waiting before retry.
[04:00:42] + Attempting to get work packet
[04:00:42] Passkey found
[04:00:42] - Will indicate memory of 2047 MB
[04:00:42] - Connecting to assignment server
[04:00:42] Connecting to http://assign.stanford.edu:8080/
[04:00:43] Posted data.
[04:00:43] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[04:00:43] + News From Folding@Home: Welcome to Folding@Home
[04:00:43] Loaded queue successfully.
[04:00:43] Sent data
[04:00:43] Connecting to http://171.64.65.54:8080/
[04:00:44] Posted data.
[04:00:44] Initial: 0000; - Receiving payload (expected size: 1763097)
[04:00:54] - Downloaded at ~172 kB/s
[04:00:54] - Averaged speed for that direction ~174 kB/s
[04:00:54] + Received work.
[04:00:54] + Closed connections
[04:00:59] 
[04:00:59] + Processing work unit
[04:00:59] Core required: FahCore_a3.exe
[04:00:59] Core found.
[04:00:59] Working on queue slot 06 [September 15 04:00:59 UTC]
[04:00:59] + Working ...
[04:00:59] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 06 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[04:00:59] 
[04:00:59] *------------------------------*
[04:00:59] Folding@Home Gromacs SMP Core
[04:00:59] Version 2.22 (Mar 12, 2010)
[04:00:59] 
[04:00:59] Preparing to commence simulation
[04:00:59] - Assembly optimizations manually forced on.
[04:00:59] - Not checking prior termination.
[04:01:00] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[04:01:00] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[04:01:00] - Digital signature verified
[04:01:00] 
[04:01:00] Project: 6076 (Run 0, Clone 163, Gen 40)
[04:01:00] 
[04:01:00] Assembly optimizations on if available.
[04:01:00] Entering M.D.
[04:01:06] Completed 0 out of 500000 steps  (0%)
[04:01:06] Gromacs cannot continue further.
[04:01:06] Going to send back what have done -- stepsTotalG=500000
[04:01:06] Work fraction=-1.#IND steps=500000.
[04:01:14] CoreStatus = C0000005 (-1073741819)
[04:01:14] Client-core communications error: ERROR 0xc0000005
[04:01:14] Deleting current work unit & continuing...
[04:01:26] Trying to send all finished work units
[04:01:26] + No unsent completed units remaining.
[04:01:26] - Preparing to get new work unit...
[04:01:26] Cleaning up work directory
[04:01:26] + Attempting to get work packet
[04:01:26] Passkey found
[04:01:26] - Will indicate memory of 2047 MB
[04:01:26] - Connecting to assignment server
[04:01:26] Connecting to http://assign.stanford.edu:8080/
[04:01:27] Posted data.
[04:01:27] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[04:01:27] + News From Folding@Home: Welcome to Folding@Home
[04:01:27] Loaded queue successfully.
[04:01:27] Sent data
[04:01:27] Connecting to http://171.64.65.54:8080/
[04:01:28] Posted data.
[04:01:28] Initial: 0000; - Receiving payload (expected size: 1763097)
[04:01:39] - Downloaded at ~156 kB/s
[04:01:39] - Averaged speed for that direction ~170 kB/s
[04:01:39] + Received work.
[04:01:39] + Closed connections
[04:01:44] 
[04:01:44] + Processing work unit
[04:01:44] Core required: FahCore_a3.exe
[04:01:44] Core found.
[04:01:44] Working on queue slot 07 [September 15 04:01:44 UTC]
[04:01:44] + Working ...
[04:01:44] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 07 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[04:01:44] 
[04:01:44] *------------------------------*
[04:01:44] Folding@Home Gromacs SMP Core
[04:01:44] Version 2.22 (Mar 12, 2010)
[04:01:44] 
[04:01:44] Preparing to commence simulation
[04:01:44] - Assembly optimizations manually forced on.
[04:01:44] - Not checking prior termination.
[04:01:44] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[04:01:44] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[04:01:44] - Digital signature verified
[04:01:44] 
[04:01:44] Project: 6076 (Run 0, Clone 163, Gen 40)
[04:01:44] 
[04:01:44] Assembly optimizations on if available.
[04:01:44] Entering M.D.
[04:01:51] Completed 0 out of 500000 steps  (0%)
[04:01:51] Gromacs cannot continue further.
[04:01:51] Going to send back what have done -- stepsTotalG=500000
[04:01:51] Work fraction=-1.#IND steps=500000.
[04:01:56] CoreStatus = C0000005 (-1073741819)
[04:01:56] Client-core communications error: ERROR 0xc0000005
[04:01:56] Deleting current work unit & continuing...
[04:02:08] Trying to send all finished work units
[04:02:08] + No unsent completed units remaining.
[04:02:08] - Preparing to get new work unit...
[04:02:08] Cleaning up work directory
[04:02:08] + Attempting to get work packet
[04:02:08] Passkey found
[04:02:08] - Will indicate memory of 2047 MB
[04:02:08] - Connecting to assignment server
[04:02:08] Connecting to http://assign.stanford.edu:8080/
[04:02:09] Posted data.
[04:02:09] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[04:02:09] + News From Folding@Home: Welcome to Folding@Home
[04:02:10] Loaded queue successfully.
[04:02:10] Sent data
[04:02:10] Connecting to http://171.64.65.54:8080/
[04:02:11] Posted data.
[04:02:11] Initial: 0000; - Receiving payload (expected size: 1763097)
[04:02:21] - Downloaded at ~172 kB/s
[04:02:21] - Averaged speed for that direction ~170 kB/s
[04:02:21] + Received work.
[04:02:21] + Closed connections
[04:02:26] 
[04:02:26] + Processing work unit
[04:02:26] Core required: FahCore_a3.exe
[04:02:26] Core found.
[04:02:26] Working on queue slot 08 [September 15 04:02:26 UTC]
[04:02:26] + Working ...
[04:02:26] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 08 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[04:02:26] 
[04:02:26] *------------------------------*
[04:02:26] Folding@Home Gromacs SMP Core
[04:02:26] Version 2.22 (Mar 12, 2010)
[04:02:26] 
[04:02:26] Preparing to commence simulation
[04:02:26] - Assembly optimizations manually forced on.
[04:02:26] - Not checking prior termination.
[04:02:27] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[04:02:27] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[04:02:27] - Digital signature verified
[04:02:27] 
[04:02:27] Project: 6076 (Run 0, Clone 163, Gen 40)
[04:02:27] 
[04:02:27] Assembly optimizations on if available.
[04:02:27] Entering M.D.
[04:02:33] Completed 0 out of 500000 steps  (0%)
[04:02:38] CoreStatus = C0000005 (-1073741819)
[04:02:38] Client-core communications error: ERROR 0xc0000005
[04:02:38] - Attempting to download new core...
[04:02:38] + Downloading new core: FahCore_a3.exe
[04:02:38] Downloading core (/~pande/Win32/x86/Core_a3.fah from www.stanford.edu)
[04:02:43] Initial: AFDE; + 10240 bytes downloaded
[04:02:43] Initial: D8B1; + 20480 bytes downloaded
[04:02:44] Initial: 7D98; + 30720 bytes downloaded
..........................................................
[04:02:52] Initial: 4809; + 2682880 bytes downloaded
[04:02:52] Initial: 4BE5; + 2693120 bytes downloaded
[04:02:52] Initial: A3BF; + 2703360 bytes downloaded
[04:02:52] Initial: 3ABE; + 2711113 bytes downloaded
[04:02:52] Verifying core Core_a3.fah...
[04:02:52] Signature is VALID
[04:02:52] 
[04:02:52] Trying to unzip core FahCore_a3.exe
[04:02:53] Decompressed FahCore_a3.exe (9325056 bytes) successfully
[04:02:58] + Core successfully engaged
[04:02:59] Deleting current work unit & continuing...
[04:03:11] Trying to send all finished work units
[04:03:11] + No unsent completed units remaining.
[04:03:11] - Preparing to get new work unit...
[04:03:11] Cleaning up work directory
[04:03:11] + Attempting to get work packet
[04:03:11] Passkey found
[04:03:11] - Will indicate memory of 2047 MB
[04:03:11] - Connecting to assignment server
[04:03:11] Connecting to http://assign.stanford.edu:8080/
[04:03:12] Posted data.
[04:03:12] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[04:03:12] + News From Folding@Home: Welcome to Folding@Home
[04:03:12] Loaded queue successfully.
[04:03:12] Sent data
[04:03:12] Connecting to http://171.64.65.54:8080/
[04:03:13] Posted data.
[04:03:13] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[04:03:13] - Attempt #1  to get work failed, and no other work to do.
Waiting before retry.
[04:03:24] + Attempting to get work packet
[04:03:24] Passkey found
[04:03:24] - Will indicate memory of 2047 MB
[04:03:24] - Connecting to assignment server
[04:03:24] Connecting to http://assign.stanford.edu:8080/
[04:03:25] Posted data.
[04:03:25] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[04:03:25] + News From Folding@Home: Welcome to Folding@Home
[04:03:25] Loaded queue successfully.
[04:03:25] Sent data
[04:03:25] Connecting to http://171.64.65.54:8080/
[04:03:26] Posted data.
[04:03:26] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[04:03:26] - Attempt #2  to get work failed, and no other work to do.
Waiting before retry.
[04:03:43] + Attempting to get work packet
[04:03:43] Passkey found
[04:03:43] - Will indicate memory of 2047 MB
[04:03:43] - Connecting to assignment server
[04:03:43] Connecting to http://assign.stanford.edu:8080/
[04:03:44] Posted data.
[04:03:44] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[04:03:44] + News From Folding@Home: Welcome to Folding@Home
[04:03:45] Loaded queue successfully.
[04:03:45] Sent data
[04:03:45] Connecting to http://171.64.65.54:8080/
[04:03:46] Posted data.
[04:03:46] Initial: 0000; - Receiving payload (expected size: 1763097)
[04:03:57] - Downloaded at ~156 kB/s
[04:03:57] - Averaged speed for that direction ~168 kB/s
[04:03:57] + Received work.
[04:03:57] + Closed connections
[04:04:02] 
[04:04:02] + Processing work unit
[04:04:02] Core required: FahCore_a3.exe
[04:04:02] Core found.
[04:04:02] Working on queue slot 09 [September 15 04:04:02 UTC]
[04:04:02] + Working ...
[04:04:02] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 09 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[04:04:02] 
[04:04:02] *------------------------------*
[04:04:02] Folding@Home Gromacs SMP Core
[04:04:02] Version 2.22 (Mar 12, 2010)
[04:04:02] 
[04:04:02] Preparing to commence simulation
[04:04:02] - Assembly optimizations manually forced on.
[04:04:02] - Not checking prior termination.
[04:04:03] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[04:04:03] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[04:04:03] - Digital signature verified
[04:04:03] 
[04:04:03] Project: 6076 (Run 0, Clone 163, Gen 40)
[04:04:03] 
[04:04:03] Assembly optimizations on if available.
[04:04:03] Entering M.D.
[04:04:09] Completed 0 out of 500000 steps  (0%)
[04:04:09] Gromacs cannot continue further.
[04:04:09] Going to send back what have done -- stepsTotalG=500000
[04:04:09] Work fraction=-1.#IND steps=500000.
[04:04:15] CoreStatus = C0000005 (-1073741819)
[04:04:15] Client-core communications error: ERROR 0xc0000005
[04:04:15] Deleting current work unit & continuing...
[04:04:27] Trying to send all finished work units
[04:04:27] + No unsent completed units remaining.
[04:04:27] - Preparing to get new work unit...
[04:04:27] Cleaning up work directory
[04:04:27] + Attempting to get work packet
[04:04:27] Passkey found
[04:04:27] - Will indicate memory of 2047 MB
[04:04:27] - Connecting to assignment server
[04:04:27] Connecting to http://assign.stanford.edu:8080/
[04:04:28] Posted data.
[04:04:28] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[04:04:28] + News From Folding@Home: Welcome to Folding@Home
[04:04:28] Loaded queue successfully.
[04:04:28] Sent data
[04:04:28] Connecting to http://171.64.65.54:8080/
[04:04:29] Posted data.
[04:04:29] Initial: 0000; - Receiving payload (expected size: 1763097)
[04:04:40] - Downloaded at ~156 kB/s
[04:04:40] - Averaged speed for that direction ~165 kB/s
[04:04:40] + Received work.
[04:04:40] + Closed connections
[04:04:45] 
[04:04:45] + Processing work unit
[04:04:45] Core required: FahCore_a3.exe
[04:04:45] Core found.
[04:04:45] Working on queue slot 00 [September 15 04:04:45 UTC]
[04:04:45] + Working ...
[04:04:45] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 00 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[04:04:45] 
[04:04:45] *------------------------------*
[04:04:45] Folding@Home Gromacs SMP Core
[04:04:45] Version 2.22 (Mar 12, 2010)
[04:04:45] 
[04:04:45] Preparing to commence simulation
[04:04:45] - Assembly optimizations manually forced on.
[04:04:45] - Not checking prior termination.
[04:04:45] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[04:04:45] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[04:04:45] - Digital signature verified
[04:04:45] 
[04:04:45] Project: 6076 (Run 0, Clone 163, Gen 40)
[04:04:45] 
[04:04:45] Assembly optimizations on if available.
[04:04:45] Entering M.D.
[04:04:51] Completed 0 out of 500000 steps  (0%)
[04:04:51] Gromacs cannot continue further.
[04:04:51] Going to send back what have done -- stepsTotalG=500000
[04:04:51] Work fraction=-1.#IND steps=500000.
[04:04:57] CoreStatus = C0000005 (-1073741819)
[04:04:57] Client-core communications error: ERROR 0xc0000005
[04:04:57] Too many errors during run. Purging queue.
[04:05:45] 
[04:05:45] + Processing work unit
[04:05:45] Core required: FahCore_a3.exe
[04:05:45] Core found.
[04:05:45] Working on queue slot 00 [September 15 04:05:45 UTC]
[04:05:45] + Working ...
[04:05:45] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 00 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[04:05:46] 
[04:05:46] *------------------------------*
[04:05:46] Folding@Home Gromacs SMP Core
[04:05:46] Version 2.22 (Mar 12, 2010)
[04:05:46] 
[04:05:46] Preparing to commence simulation
[04:05:46] - Assembly optimizations manually forced on.
[04:05:46] - Not checking prior termination.
[04:05:46] Error: Missing work file=<>
[04:05:46] 
[04:05:46] Folding@home Core Shutdown: MISSING_WORK_FILES
[04:05:50] CoreStatus = 74 (116)
[04:05:50] The core could not find the work files specified. Removing from queue
[04:05:50] Deleting current work unit & continuing...
[04:05:54] Trying to send all finished work units
[04:05:54] + No unsent completed units remaining.
[04:05:54] - Preparing to get new work unit...
[04:05:54] Cleaning up work directory
[04:05:54] + Attempting to get work packet
[04:05:54] Passkey found
[04:05:54] - Will indicate memory of 2047 MB
[04:05:54] - Connecting to assignment server
[04:05:54] Connecting to http://assign.stanford.edu:8080/
[04:05:55] Posted data.
[04:05:55] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[04:05:55] + News From Folding@Home: Welcome to Folding@Home
[04:05:55] Loaded queue successfully.
[04:05:55] Sent data
[04:05:55] Connecting to http://171.64.65.54:8080/
[04:05:56] Posted data.
[04:05:56] Initial: 0000; - Error: Bad packet type from server, expected work assignment
[04:05:56] - Attempt #1  to get work failed, and no other work to do.
Waiting before retry.
[04:06:08] + Attempting to get work packet
[04:06:08] Passkey found
[04:06:08] - Will indicate memory of 2047 MB
[04:06:08] - Connecting to assignment server
[04:06:08] Connecting to http://assign.stanford.edu:8080/
[04:06:09] Posted data.
[04:06:09] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[04:06:09] + News From Folding@Home: Welcome to Folding@Home
[04:06:09] Loaded queue successfully.
[04:06:09] Sent data
[04:06:09] Connecting to http://171.64.65.54:8080/
[04:06:11] Posted data.
[04:06:11] Initial: 0000; - Receiving payload (expected size: 1763097)
[04:06:22] - Downloaded at ~156 kB/s
[04:06:22] - Averaged speed for that direction ~163 kB/s
[04:06:22] + Received work.
[04:06:22] + Closed connections
[04:06:27] 
[04:06:27] + Processing work unit
[04:06:27] Core required: FahCore_a3.exe
[04:06:27] Core found.
[04:06:27] Working on queue slot 01 [September 15 04:06:27 UTC]
[04:06:27] + Working ...
[04:06:27] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 01 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[04:06:27] 
[04:06:27] *------------------------------*
[04:06:27] Folding@Home Gromacs SMP Core
[04:06:27] Version 2.22 (Mar 12, 2010)
[04:06:27] 
[04:06:27] Preparing to commence simulation
[04:06:27] - Assembly optimizations manually forced on.
[04:06:27] - Not checking prior termination.
[04:06:28] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[04:06:28] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[04:06:28] - Digital signature verified
[04:06:28] 
[04:06:28] Project: 6076 (Run 0, Clone 163, Gen 40)
[04:06:28] 
[04:06:28] Assembly optimizations on if available.
[04:06:28] Entering M.D.
[04:06:34] Completed 0 out of 500000 steps  (0%)
[04:06:34] Gromacs cannot continue further.
[04:06:34] Going to send back what have done -- stepsTotalG=500000
[04:06:34] Work fraction=-1.#IND steps=500000.
[04:06:40] logfile size=0 infoLength=0 edr=0 trr=23
[04:06:40] logfile size: 0 info=0 bed=0 hdr=23
[04:06:40] - Writing 640 bytes of core data to disk...
[04:06:44] CoreStatus = C0000005 (-1073741819)
[04:06:44] Client-core communications error: ERROR 0xc0000005
[04:06:44] - Attempting to download new core...
[04:06:44] + Downloading new core: FahCore_a3.exe
[04:06:44] Downloading core (/~pande/Win32/x86/Core_a3.fah from www.stanford.edu)
[04:06:44] Initial: AFDE; + 10240 bytes downloaded
[04:06:45] Initial: D8B1; + 20480 bytes downloaded
[04:06:45] Initial: 7D98; + 30720 bytes downloaded
.......................................
[04:06:53] Initial: 4BE5; + 2693120 bytes downloaded
[04:06:53] Initial: A3BF; + 2703360 bytes downloaded
[04:06:53] Initial: 3ABE; + 2711113 bytes downloaded
[04:06:53] Verifying core Core_a3.fah...
[04:06:53] Signature is VALID
[04:06:53] 
[04:06:53] Trying to unzip core FahCore_a3.exe
[04:06:54] Decompressed FahCore_a3.exe (9325056 bytes) successfully
[04:06:59] + Core successfully engaged
[04:06:59] Deleting current work unit & continuing...
[04:07:11] Trying to send all finished work units
[04:07:11] + No unsent completed units remaining.
[04:07:11] - Preparing to get new work unit...
[04:07:11] Cleaning up work directory
[04:07:11] + Attempting to get work packet
[04:07:11] Passkey found
[04:07:11] - Will indicate memory of 2047 MB
[04:07:11] - Connecting to assignment server
[04:07:11] Connecting to http://assign.stanford.edu:8080/
[04:07:12] Posted data.
[04:07:12] Initial: 40AB; - Successful: assigned to (171.64.65.54).
[04:07:12] + News From Folding@Home: Welcome to Folding@Home
[04:07:13] Loaded queue successfully.
[04:07:13] Sent data
[04:07:13] Connecting to http://171.64.65.54:8080/
[04:07:14] Posted data.
[04:07:14] Initial: 0000; - Receiving payload (expected size: 1763097)
[04:07:24] - Downloaded at ~172 kB/s
[04:07:24] - Averaged speed for that direction ~165 kB/s
[04:07:24] + Received work.
[04:07:24] + Closed connections
[04:07:29] 
[04:07:29] + Processing work unit
[04:07:29] Core required: FahCore_a3.exe
[04:07:29] Core found.
[04:07:29] Working on queue slot 02 [September 15 04:07:29 UTC]
[04:07:29] + Working ...
[04:07:29] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 02 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[04:07:29] 
[04:07:29] *------------------------------*
[04:07:29] Folding@Home Gromacs SMP Core
[04:07:29] Version 2.22 (Mar 12, 2010)
[04:07:29] 
[04:07:29] Preparing to commence simulation
[04:07:29] - Assembly optimizations manually forced on.
[04:07:29] - Not checking prior termination.
[04:07:30] - Expanded 1762585 -> 2248525 (decompressed 127.5 percent)
[04:07:30] Called DecompressByteArray: compressed_data_size=1762585 data_size=2248525, decompressed_data_size=2248525 diff=0
[04:07:30] - Digital signature verified
[04:07:30] 
[04:07:30] Project: 6076 (Run 0, Clone 163, Gen 40)
[04:07:30] 
[04:07:30] Assembly optimizations on if available.
[04:07:30] Entering M.D.
[04:07:36] Completed 0 out of 500000 steps  (0%)
[04:07:36] Gromacs cannot continue further.
[04:07:36] Going to send back what have done -- stepsTotalG=500000
[04:07:36] Work fraction=-1.#IND steps=500000.
[04:07:42] CoreStatus = C0000005 (-1073741819)
[04:07:42] Client-core communications error: ERROR 0xc0000005
[04:07:42] Deleting current work unit & continuing...
[04:07:54] Trying to send all finished work units
[04:07:54] + No unsent completed units remaining.
[04:07:54] - Preparing to get new work unit...
[04:07:54] Cleaning up work directory
[04:07:54] + Attempting to get work packet
[04:07:54] Passkey found
[04:07:54] - Will indicate memory of 2047 MB
[04:07:54] - Connecting to assignment server
[04:07:54] Connecting to http://assign.stanford.edu:8080/
[04:07:55] Posted data.
[04:07:55] Initial: 40AB; - Successful: assigned to (171.64.65.56).
[04:07:55] + News From Folding@Home: Welcome to Folding@Home
[04:07:55] Loaded queue successfully.
[04:07:55] Sent data
[04:07:55] Connecting to http://171.64.65.56:8080/
[04:07:56] Posted data.
[04:07:56] Initial: 0000; - Receiving payload (expected size: 764706)
[04:08:01] - Downloaded at ~149 kB/s
[04:08:01] - Averaged speed for that direction ~162 kB/s
[04:08:01] + Received work.
[04:08:01] + Closed connections
[04:08:06] 
[04:08:06] + Processing work unit
[04:08:06] Core required: FahCore_a3.exe
[04:08:06] Core found.
[04:08:06] Working on queue slot 03 [September 15 04:08:06 UTC]
[04:08:06] + Working ...
[04:08:06] - Calling '.\FahCore_a3.exe -dir work/ -nice 19 -suffix 03 -np 4 -nocpulock -checkpoint 6 -forceasm -verbose -lifeline 5948 -version 630'

[04:08:06] 
[04:08:06] *------------------------------*
[04:08:06] Folding@Home Gromacs SMP Core
[04:08:06] Version 2.22 (Mar 12, 2010)
[04:08:06] 
[04:08:06] Preparing to commence simulation
[04:08:06] - Assembly optimizations manually forced on.
[04:08:06] - Not checking prior termination.
[04:08:06] - Expanded 764194 -> 1404481 (decompressed 183.7 percent)
[04:08:06] Called DecompressByteArray: compressed_data_size=764194 data_size=1404481, decompressed_data_size=1404481 diff=0
[04:08:06] - Digital signature verified
[04:08:06] 
[04:08:06] Project: 6702 (Run 0, Clone 37, Gen 41)
[04:08:06] 
[04:08:06] Assembly optimizations on if available.
[04:08:06] Entering M.D.
[04:08:13] Completed 0 out of 2000000 steps  (0%)
[04:19:54] Completed 20000 out of 2000000 steps  (1%)
[04:31:32] Completed 40000 out of 2000000 steps  (2%)
[04:43:13] Completed 60000 out of 2000000 steps  (3%)
[04:46:01] - Autosending finished units... [September 15 04:46:01 UTC]
[04:46:01] Trying to send all finished work units
[04:46:01] + No unsent completed units remaining.
[04:46:01] - Autosend completed
[04:55:10] Completed 80000 out of 2000000 steps  (4%)
[05:07:00] Completed 100000 out of 2000000 steps  (5%)
[05:18:44] Completed 120000 out of 2000000 steps  (6%)
[05:30:28] Completed 140000 out of 2000000 steps  (7%)
[05:38:17] Killing all core threads
[05:38:17] Could not get process id information.  Please kill core process manually

Folding@Home Client Shutdown at user request.
[05:38:17] ***** Got a SIGTERM signal (2)
[05:38:17] Killing all core threads
[05:38:17] Could not get process id information.  Please kill core process manually

Folding@Home Client Shutdown.

Re: Project: 6076 (Run 0, Clone 163, Gen 40)

Posted: Wed Sep 15, 2010 7:28 am
by gannett
Me too. I had the WU fail repeatedly.

In Summary

Code: Select all

[01:20:39] Client-core communications error: ERROR 0x8b
[01:21:00] Project: 6076 (Run 0, Clone 163, Gen 40)
[01:21:07] Client-core communications error: ERROR 0x8b
[01:22:29] Project: 6076 (Run 0, Clone 163, Gen 40)
[01:22:35] Client-core communications error: ERROR 0x8b
[01:24:54] Project: 6076 (Run 0, Clone 163, Gen 40)
[01:25:00] Client-core communications error: ERROR 0x8b
[01:25:21] Project: 6076 (Run 0, Clone 163, Gen 40)
[01:25:28] Client-core communications error: ERROR 0x8b
[01:25:49] Project: 6076 (Run 0, Clone 163, Gen 40)
[01:25:55] Client-core communications error: ERROR 0x8b

It tried re-downloading core A3 but just failed to run the unit sometiem complaining about the missing work files and sometime about bad molecules.

[

Code: Select all

[01:13:50] Project: 6076 (Run 0, Clone 163, Gen 40)
[01:13:50]
[01:13:50] Assembly optimizations on if available.
[01:13:50] Entering M.D.
[01:13:56] Completed 0 out of 500000 steps  (0%)
[01:13:56] CoreStatus = 8B (139)
[01:13:56] Client-core communications error: ERROR 0x8b
[01:13:56] - Attempting to download new core...
[01:13:56] + Downloading new core: FahCore_a3.exe
[01:13:57] + 10240 bytes downloaded
[01:13:58] + 20480 bytes downloaded
Kept failing until failed about 5 times then stopped folding together.

The console had the science debugs messages but these are not in the log file that I can find.

Code: Select all

[01:21:00] Assembly optimizations on if available.
[01:21:00] Entering M.D.
Starting 7 threads
NNODES=7, MYRANK=0, HOSTNAME=thread #0
NNODES=7, MYRANK=4, HOSTNAME=thread #4
NNODES=7, MYRANK=3, HOSTNAME=thread #3
NNODES=7, MYRANK=1, HOSTNAME=thread #1
NNODES=7, MYRANK=2, HOSTNAME=thread #2
NNODES=7, MYRANK=5, HOSTNAME=thread #5
NNODES=7, MYRANK=6, HOSTNAME=thread #6
Reading file work/wudata_08.tpr, VERSION 4.0.99_development_20090605 (single precision)
Making 1D domain decomposition 1 x 7 x 1
starting mdrun 'Mutant_scan'
20500002 steps,  41000.0 ps (continuing from step 20000002,  40000.0 ps).

step 20000002: Water molecule starting at atom 27801 can not be settled.
Check for bad contacts and/or reduce the timestep if appropriate.

step 20000003: Water molecule starting at atom 76656 can not be settled.
Check for bad contacts and/or reduce the timestep if appropriate.

Step 20000004, time 40000 (ps)  LINCS WARNING
relative constraint deviation after LINCS:
rms 67896257462048848.000000, max 3141115879433961472.000000 (between atoms 13889 and 13887)

Step 20000004, time 40000 (ps)  LINCS WARNING
relative constraint deviation after LINCS:
rms 10792323596.234789, max 867404939264.000000 (between atoms 21117 and 21118)
bonds that rotated more than 90 degrees:
 atom 1 atom 2  angle  previous, current, constraint length
bonds that rotated more than 90 degrees:
 atom 1 atom 2  angle  previous, current, constraint length
  21125  21124  101.6    0.1430 11020.3955      0.1430
  21124  21125  101.6    0.1430 11020.3955      0.1430
  14155  14153  124.4    0.1480 10311.8604      0.1480
  21119  21118   92.5    0.1530 31800481792.0000      0.1530
  14154  14153  120.2    0.1480 10228.8594      0.1480
  21117  21118   91.4    0.1470 127508520960.0000      0.1470
  14157  14156   98.6    0.1430 380478.0938      0.1430
  21114  21117   91.2    0.1470 86876504064.0000      0.1470
  14178  14158   90.8    0.1430 3667171.0000      0.1430
  21116  21117   91.0    0.1470 121631023104.0000      0.1470
  14160  14159   96.1    0.1430 596560.8125      0.1430
  21115  21117   91.2    0.1470 120668577792.0000      0.1470
  14163  14161  113.0    0.1530 29751.9219      0.1530
  21120  21119   94.9    0.1430 7764990464.0000      0.1430
  14162  14161  116.3    0.1230 29970.3027      0.1230
  21121  21120   96.3    0.1610 1116203904.0000      0.1610
  20502  20503   95.5    0.1530 241681.1562      0.1530
  14164  14163  102.7    0.1530 153.2182      0.1530
  20522  20523   91.1    0.1360 1835347.2500      0.1360
  14165  14164  130.2    0.1530  90.0278      0.1530
  20525  20526   91.1    0.1530 961465.9375      0.1530
  20501  20502   94.1    0.1530 254361.5156      0.1530
  21117  21114   91.2    0.1470 86876504064.0000      0.1470
  20497  20500   96.8    0.1610 10852.0732      0.1610
  21117  21115   91.2    0.1470 120668577792.0000      0.1470
  20496  20497  113.4    0.1610 1570.0620      0.1610
  21117  21116   91.0    0.1470 121631023104.0000      0.1470
  20505  20504   98.6    0.1360 18757.7285      0.1360
  21117  21118   91.4    0.1470 127508520960.0000      0.1470
  21118  21119   92.5    0.1530 31800481792.0000      0.1530
  21119  21120   94.9    0.1430 7764990464.0000      0.1430
  20508  20507  113.4    0.1530 142.1287      0.1530
  21120  21121   96.3    0.1610 1116203904.0000      0.1610
  20502  20501   94.1    0.1530 254361.5000      0.1530
  20502  20503   95.5    0.1530 241681.1562      0.1530
  20504  20505   98.6    0.1360 18757.7285      0.1360
  20507  20508  113.4    0.1530 142.1467      0.1530
  20523  20522   91.1    0.1360 1835347.1250      0.1360
  20526  20525   91.1    0.1530 961465.8750      0.1530
  20528  20527   96.8    0.1530 45753.1328      0.1530
  13919  13918   99.1    0.1360 9363.5332      0.1360
  13889  13886   91.2    0.1470 224633232031744000.0000      0.1470
  13889  13887   90.6    0.1470 461744031253135360.0000      0.1470
  13889  13888   91.3    0.1470 223453215536971776.0000      0.1470
  13890  13889   92.2    0.1470 212174820396236800.0000      0.1470
  13891  13890   92.8    0.1530 70254983378894848.0000      0.1530
  13892  13891   97.6    0.1430 19718246395543552.0000      0.1430
  13893  13892   95.3    0.1610 3701833654599680.0000      0.1610
  13895  13893   90.4    0.1480 411610438959104.0000      0.1480
  13897  13896   90.3    0.1430 560239.2500      0.1430
  13898  13897   94.1    0.1530 87882.1719      0.1530
  13918  13898   98.6    0.1430 7721.2446      0.1430
  13899  13898  106.6    0.1530 8383.1025      0.1530
  13900  13899   99.6    0.1430 561.6043      0.1430
  20530  20529  113.9    0.1530 1731.9685      0.1530
  14166  14165   97.4    0.1530  36.7400      0.1530
  20497  20496  113.4    0.1610 1570.1603      0.1610
  20500  20497   96.8    0.1610 10852.0732      0.1610

step 20000004: Water molecule starting at atom 63576 can not be settled.
Check for bad contacts and/or reduce the timestep if appropriate.

step 20000004: Water molecule starting at atom 57405 can not be settled.
Check for bad contacts and/or reduce the timestep if appropriate.
[01:21:06] Completed 0 out of 500000 steps  (0%)
Segmentation fault
[01:21:07] CoreStatus = 8B (139)
[01:21:07] Client-core communications error: ERROR 0x8b
Gannett

Re: Project: 6076 (Run 0, Clone 163, Gen 40)

Posted: Wed Sep 15, 2010 12:50 pm
by bruce
I've marked Project: 6076 (Run 0, Clone 163, Gen 40) as a bad WU. Everybody is having trouble with it.