covid moonshot bad wu setup

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markdotgooley
Posts: 101
Joined: Tue Apr 21, 2020 11:46 am

Re: covid moonshot bad wu setup

Post by markdotgooley »

JohnChodera wrote:> In the past few days I’ve been getting some Moonshot WUs that take over 4 hours to complete on either of my GPUs (one RTX 2060, one RTX 2060 KO, no overclocking) — an hour or more longer than what was usual earlier. I’ll take that as a sign that WUs can and will be adjusted for the new GPUs due to be available in the next few months.

Can you let us know which PRCGs these were? I think they're likely part of the 1343x series, where we are simulating the X-ray structures collected by DiamondMX for the COVID Moonshot: http://postera.ai/covid.

And yes, you may be right about that and some other coming good things. ;)

~ John Chodera // MSKCC
A 13433 took about 4:45 and a current 13437 is estimated to take about 7 hours. Definitely longer times than I’m used to. (Too lazy to check the logs closely.) No big deal for me, just different.
Neil-B
Posts: 1996
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Hardware configuration: 1: 2x Xeon E5-2697v3@2.60GHz, 512GB DDR4 LRDIMM, SSD Raid, Win10 Ent 20H2, Quadro K420 1GB, FAH 7.6.21
2: Xeon E3-1505Mv5@2.80GHz, 32GB DDR4, NVME, Win10 Pro 20H2, Quadro M1000M 2GB, FAH 7.6.21 (actually have two of these)
3: i7-960@3.20GHz, 12GB DDR3, SSD, Win10 Pro 20H2, GTX 750Ti 2GB, GTX 1080Ti 11GB, FAH 7.6.21
Location: UK

Re: covid moonshot bad wu setup

Post by Neil-B »

@markdotgooley John is asking for the PRCG - the Project, Run, Clone, Gen - this can be got from the logs, the advanced/web control interfaces ... When reporting issues giving the PRCG allows the troubleshooting to be narrowed down to a specific WU that can be investigated and this really helps :)
2x Xeon E5-2697v3, 512GB DDR4 LRDIMM, SSD Raid, W10-Ent, Quadro K420
Xeon E3-1505Mv5, 32GB DDR4, NVME, W10-Pro, Quadro M1000M
i7-960, 12GB DDR3, SSD, W10-Pro, GTX1080Ti
i9-10850K, 64GB DDR4, NVME, W11-Pro, RTX3070

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markdotgooley
Posts: 101
Joined: Tue Apr 21, 2020 11:46 am

Re: covid moonshot bad wu setup

Post by markdotgooley »

The 13437 is (140, 8, 1) and the 13433 is (5, 4, 7). I wouldn’t say that anything is wrong with either, just they take longer than what I’m used to.
Neil-B
Posts: 1996
Joined: Sun Mar 22, 2020 5:52 pm
Hardware configuration: 1: 2x Xeon E5-2697v3@2.60GHz, 512GB DDR4 LRDIMM, SSD Raid, Win10 Ent 20H2, Quadro K420 1GB, FAH 7.6.21
2: Xeon E3-1505Mv5@2.80GHz, 32GB DDR4, NVME, Win10 Pro 20H2, Quadro M1000M 2GB, FAH 7.6.21 (actually have two of these)
3: i7-960@3.20GHz, 12GB DDR3, SSD, Win10 Pro 20H2, GTX 750Ti 2GB, GTX 1080Ti 11GB, FAH 7.6.21
Location: UK

Re: covid moonshot bad wu setup

Post by Neil-B »

The base points is actually lower for 13437 than 13433 so logically it should be a little bit quicker ... with these PRCGs someone will be able to see if anything obviously odd is going on.
2x Xeon E5-2697v3, 512GB DDR4 LRDIMM, SSD Raid, W10-Ent, Quadro K420
Xeon E3-1505Mv5, 32GB DDR4, NVME, W10-Pro, Quadro M1000M
i7-960, 12GB DDR3, SSD, W10-Pro, GTX1080Ti
i9-10850K, 64GB DDR4, NVME, W11-Pro, RTX3070

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JohnChodera
Pande Group Member
Posts: 467
Joined: Fri Feb 22, 2013 9:59 pm

Re: covid moonshot bad wu setup

Post by JohnChodera »

> The base points is actually lower for 13437 than 13433 so logically it should be a little bit quicker ... with these PRCGs someone will be able to see if anything obviously odd is going on.

Whoa, that may be a mistake. Looking into this.
JohnChodera
Pande Group Member
Posts: 467
Joined: Fri Feb 22, 2013 9:59 pm

Re: covid moonshot bad wu setup

Post by JohnChodera »

I'm showing the stats credit for 13433 (SARS-CoV-2 Mpro monomer) is 70660, and for 13737 (Mpro dimer) is 118000. Are you seeing the base credit is _lower_ for 13437 than 13433?
Neil-B
Posts: 1996
Joined: Sun Mar 22, 2020 5:52 pm
Hardware configuration: 1: 2x Xeon E5-2697v3@2.60GHz, 512GB DDR4 LRDIMM, SSD Raid, Win10 Ent 20H2, Quadro K420 1GB, FAH 7.6.21
2: Xeon E3-1505Mv5@2.80GHz, 32GB DDR4, NVME, Win10 Pro 20H2, Quadro M1000M 2GB, FAH 7.6.21 (actually have two of these)
3: i7-960@3.20GHz, 12GB DDR3, SSD, Win10 Pro 20H2, GTX 750Ti 2GB, GTX 1080Ti 11GB, FAH 7.6.21
Location: UK

Re: covid moonshot bad wu setup

Post by Neil-B »

D'OH ... MY REALLY BAD ... Homer moment to end all moments ... read the wrong column :( ... please ignore my previous totally wrong post as looked at the atoms not the base credit !!
2x Xeon E5-2697v3, 512GB DDR4 LRDIMM, SSD Raid, W10-Ent, Quadro K420
Xeon E3-1505Mv5, 32GB DDR4, NVME, W10-Pro, Quadro M1000M
i7-960, 12GB DDR3, SSD, W10-Pro, GTX1080Ti
i9-10850K, 64GB DDR4, NVME, W11-Pro, RTX3070

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bruce
Posts: 20824
Joined: Thu Nov 29, 2007 10:13 pm
Location: So. Cal.

Re: covid moonshot bad wu setup

Post by bruce »

Assignments take a varying amount of time, but they're not limited to "what you are used to" I've gotten projects that take several days, and you may, too.
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