model name : Intel(R) Core(TM)2 Duo CPU E6750 @ 2.66GHz
cpu MHz : 1998.000
cache size : 4096 KB
Memory: 975.99 MB physical, 1.94 GB virtual
...
Current Work Unit
-----------------
Name: Protein in POPC
Tag: P2605R0C540G46
Download time: May 21 22:54:05
Due time: May 25 22:54:05
Progress: 0% [__________]
Code: Select all
./fah6 -verbosity 9 -smp
Note: Please read the license agreement (fah6 -license). Further
use of this software requires that you have read and accepted this agreement.
2 cores detected
--- Opening Log file [May 21 23:48:51]
# SMP Client ##################################################################
###############################################################################
Folding@Home Client Version 6.02beta
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: /root/fah6
Executable: ./fah6
Arguments: -verbosity 9 -smp
[23:48:51] - Ask before connecting: No
[23:48:51] - User name: parkut (Team 4)
[23:48:51] - User ID: 3DAEED787A87E4F8
[23:48:51] - Machine ID: 1
[23:48:51]
[23:48:51] Loaded queue successfully.
[23:48:51]
[23:48:51] + Processing work unit
[23:48:51] Core required: FahCore_a1.exe
[23:48:51] Core found.
[23:48:51] - Autosending finished units...
[23:48:51] Trying to send all finished work units
[23:48:51] + No unsent completed units remaining.
[23:48:51] - Autosend completed
[23:48:51] Working on Unit 06 [May 21 23:48:51]
[23:48:51] + Working ...
[23:48:51] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a1.exe -dir work/ -suffix 06 -checkpoint 15 -verbose -lifeline 10178 -version 602'
[23:48:51]
[23:48:51] *------------------------------*
[23:48:51] Folding@Home Gromacs SMP Core
[23:48:51] Version 1.74 (November 27, 2006)
[23:48:51]
[23:48:51] Preparing to commence simulation
[23:48:51] - Ensuring status. Please wait.
[23:48:51]
[23:48:51] Project: 2605 (Run 0, Clone 540, Gen 46)
[23:48:51]
[23:48:51] Assembly optimizations on if available.
[23:48:51] Entering M.D.
[23:49:08] - Expanded 2420849 -> 12854153 (decompressed 530.9 percent)
[23:49:08]
[23:49:08] Project: 2605 (Run 0, Clone 540, Gen 46)
[23:49:08]
[23:49:08] Entering M.D.
NNODES=4, MYRANK=3, HOSTNAME=conroe7.parkut.com
NNODES=4, MYRANK=0, HOSTNAME=conroe7.parkut.com
NNODES=4, MYRANK=2, HOSTNAME=conroe7.parkut.com
NNODES=4, MYRANK=1, HOSTNAME=conroe7.parkut.com
NODEID=2 argc=15
NODEID=0 argc=15
NODEID=1 argc=15
NODEID=3 argc=15
Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
Copyright (c) 1991-2000, University of Groningen, The Netherlands.
Copyright (c) 2001-2004, The GROMACS development team,
check out http://www.gromacs.org for more information.
This inclusion of Gromacs code in the Folding@Home Core is under
a special license (see http://folding.stanford.edu/gromacs.html)
specially granted to Stanford by the copyright holders. If you
are interested in using Gromacs, visit www.gromacs.org where
you can download a free version of Gromacs under
the terms of the GNU General Public License (GPL) as published
by the Free Software Foundation; either version 2 of the License,
or (at your option) any later version.
(single precision)
starting mdrun 'Protein in POPC'
500000 steps, 1000.0 ps.
[23:49:16] s
[23:49:16] otein: ProteExtra SSE boost OK.
[23:49:16] ocal files
[23:49:16] Extra SSE boost OK.
[23:49:16] Finalizing output
[23:49:16] nt)
[23:49:16]
[23:49:16] Folding@home Core Shutdown: INTERRUPTED
[0]0:Return code = 102
[0]1:Return code = 0, signaled with Segmentation fault
[0]2:Return code = 0, signaled with Segmentation fault
[0]3:Return code = 0, signaled with Segmentation fault
[23:49:20] CoreStatus = 66 (102)
[23:49:20] + Shutdown requested by user. Exiting.***** Got a SIGTERM signal (15)
[23:49:20] Killing all core threads
Folding@Home Client Shutdown.
