Search found 8 matches
- Thu Aug 13, 2020 11:08 pm
- Forum: Discussions of General-FAH topics
- Topic: FAHViewer: in/dependence of "snapshot cycling" & "rotation"?
- Replies: 2
- Views: 1114
Re: FAHViewer: in/dependence of "snapshot cycling" & "rotati
The space bar actually pauses all animation. Should be listed better on the help screen. To just stop the default rotation, press the left arrow twice.
- Tue Jul 14, 2020 12:57 am
- Forum: V7.6.x Public Release Windows/Linux/MacOS X
- Topic: protein viewer for 7.6.13 not working, no data via API
- Replies: 7
- Views: 8119
Re: protein viewer for 7.6.13 not working, no data via API
I experimented some more and found another workaround / solution: if you first enter the 'hello' command then the trajectory commands work. I updated the issue in GitHub.
- Mon Jul 13, 2020 8:33 pm
- Forum: V7.6.x Public Release Windows/Linux/MacOS X
- Topic: Change Protein Viewer Background Picture
- Replies: 7
- Views: 2170
Re: Change Protein Viewer Background Picture
You can use your own image as a background by saving it as a ppm file (GIMP can do that). Then set it with --background=<filename>
- Mon Jul 13, 2020 5:56 pm
- Forum: Scientific discussions (Non-FAH)
- Topic: Question regarding the News post on July 8
- Replies: 17
- Views: 18936
Re: Question regarding the News post on July 8
By comparison, here's an article about using a supercomputer for 100 days in 2010 to set a new record simulating a protein for one millisecond.
https://www.nature.com/news/2010/101014 ... ews.2010.5
https://www.nature.com/news/2010/101014 ... ews.2010.5
- Wed Jul 08, 2020 4:09 am
- Forum: V7.6.x Public Release Windows/Linux/MacOS X
- Topic: protein viewer for 7.6.13 not working, no data via API
- Replies: 7
- Views: 8119
Re: protein viewer for 7.6.13 not working, no data via API
Actually it only sends the trajectory when it has new data, which is 100x per WU. The increment in the updates command just tells it how often to check.
- Tue Jul 07, 2020 10:20 pm
- Forum: V7.6.x Public Release Windows/Linux/MacOS X
- Topic: protein viewer for 7.6.13 not working, no data via API
- Replies: 7
- Views: 8119
Re: protein viewer for 7.6.13 not working, no data via API
FAHViewer gets the trajectory using the updates command, as in
which seems to work (more or less). I do get your result with the bare trajectory command, that is the client closes the connection.
Code: Select all
updates add 4 5 $(trajectory 1)
- Mon Jun 29, 2020 6:45 pm
- Forum: The Science of FAH -- questions/answers
- Topic: Question about the protein viewer
- Replies: 2
- Views: 15668
Re: Question about the protein viewer
The FAH client using the OPENMM core (which runs on GPUs) is not sending correct atom types to the viewer. So the colors don't mean much. Atom types from the GROMACS core are ok, colors are C=dark gray, H=light gray, O=red, N=blue, S=yellow.
- Tue May 19, 2020 6:52 pm
- Forum: V7.6.x Public Release Windows/Linux/MacOS X
- Topic: "Hung download" bug still present in v7.6.13
- Replies: 13
- Views: 3570
Re: "Hung download" bug still present in v7.6.13
Hello I also come across this today. Just one CPU slot, one GPU slot, the GPU hung on download, stuck at 19.72%. Over 2 hours ago so any watchdog doesn't seem to be working. The concurrent upload of the completed WU took three tries, perhaps the download is less able to recover from network glitches...